MELO3C019249 (gene) Melon (DHL92) v4

Overview


Name	MELO3C019249
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Protein MNN4-like
Location	chr11: 9856893 .. 9857066 (-)
RNA-Seq Expression	MELO3C019249
Synteny	MELO3C019249

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAGTAACCCAGTTTGTGGAGAAGGGAAAGGGCAAAGATATGACGTTTGATGAACACTACGAGGAGTTTGAGAAGGTGGTTGAGAATTTAAGTCTTTTAGAGCAAGAGGCGCTAAGGCCGAAGAAAAAGAGAAAGGTTATAATGAAGAAGAAGGCCTTGAAGGCATAA

mRNA sequence

ATGGAAAAAGTAACCCAGTTTGTGGAGAAGGGAAAGGGCAAAGATATGACGTTTGATGAACACTACGAGGAGTTTGAGAAGGTGGTTGAGAATTTAAGTCTTTTAGAGCAAGAGGCGCTAAGGCCGAAGAAAAAGAGAAAGGTTATAATGAAGAAGAAGGCCTTGAAGGCATAA

Coding sequence (CDS)

ATGGAAAAAGTAACCCAGTTTGTGGAGAAGGGAAAGGGCAAAGATATGACGTTTGATGAACACTACGAGGAGTTTGAGAAGGTGGTTGAGAATTTAAGTCTTTTAGAGCAAGAGGCGCTAAGGCCGAAGAAAAAGAGAAAGGTTATAATGAAGAAGAAGGCCTTGAAGGCATAA

Protein sequence

MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKALKA

Homology

[Close]

BLAST of MELO3C019249 vs. NCBI nr
Match: TYK15837.1 (hypothetical protein E5676_scaffold637G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 67.0 bits (162), Expect = 6.0e-08
Identity = 38/55 (69.09%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 1   MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKAL 56
           +EK  Q  EK KGKDMTF EH +EFEK  +NLS LE+EA RPKKKRKV MKKK L
Sbjct: 76  IEKAAQSAEKVKGKDMTFKEHCKEFEKEFKNLSHLEEEAPRPKKKRKVTMKKKTL 130

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BLAST of MELO3C019249 vs. NCBI nr
Match: KAA0066500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 1.0e-07
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 1   MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKALK 57
           +EKV  F EKGKG++ TF+EHYEEFEK +  L  LE +A+RP  KRK++MKKKAL+
Sbjct: 86  VEKVAIFAEKGKGEEKTFEEHYEEFEKEINELIPLEDKAIRPATKRKIMMKKKALR 141

[Close]

BLAST of MELO3C019249 vs. NCBI nr
Match: KAA0048705.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.9 bits (154), Expect = 5.0e-07
Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 0


Query: 1   MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKALK 57
           +EKV    +K KGK+ T +EH EEFEK +ENL  LE+EA RPKKKRKV MKKK LK
Sbjct: 115 VEKVVHSAKKDKGKEKTHEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLK 170

[Close]

BLAST of MELO3C019249 vs. NCBI nr
Match: KAA0065695.1 (hypothetical protein E6C27_scaffold90G001660 [Cucumis melo var. makuwa] >TYK14446.1 hypothetical protein E5676_scaffold186G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 6.6e-07
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 1   MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKALKA 58
           +EKV+Q  +KGKGK+ T DE+YEEF+K +E+L LLE+E  R KK+ KV MKKK L+A
Sbjct: 53  VEKVSQCAKKGKGKEKTLDEYYEEFQKEIEDLCLLEEEGSRNKKEGKVTMKKKTLRA 109

[Close]

BLAST of MELO3C019249 vs. NCBI nr
Match: TYK15833.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 8.6e-07
Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 0


Query: 1   MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKALK 57
           +EKV    +K KGK+ T +EH EEFEK +ENL  LE+EA RPKKKRKV MKKK LK
Sbjct: 51  VEKVVHSAKKDKGKEKTQEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLK 106

[Close]

BLAST of MELO3C019249 vs. ExPASy TrEMBL
Match: A0A5D3CV96 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00080 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-08
Identity = 38/55 (69.09%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 1   MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKAL 56
           +EK  Q  EK KGKDMTF EH +EFEK  +NLS LE+EA RPKKKRKV MKKK L
Sbjct: 76  IEKAAQSAEKVKGKDMTFKEHCKEFEKEFKNLSHLEEEAPRPKKKRKVTMKKKTL 130

[Close]

BLAST of MELO3C019249 vs. ExPASy TrEMBL
Match: A0A5D3C2J1 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00380 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.9e-08
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 1   MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKALK 57
           +EKV  F EKGKG++ TF+EHYEEFEK +  L  LE +A+RP  KRK++MKKKAL+
Sbjct: 86  VEKVAIFAEKGKGEEKTFEEHYEEFEKEINELIPLEDKAIRPATKRKIMMKKKALR 141

[Close]

BLAST of MELO3C019249 vs. ExPASy TrEMBL
Match: A0A5A7U502 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00280 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.4e-07
Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 0


Query: 1   MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKALK 57
           +EKV    +K KGK+ T +EH EEFEK +ENL  LE+EA RPKKKRKV MKKK LK
Sbjct: 115 VEKVVHSAKKDKGKEKTHEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLK 170

[Close]

BLAST of MELO3C019249 vs. ExPASy TrEMBL
Match: A0A5A7VIU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001080 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.2e-07
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 1   MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKALKA 58
           +EKV+Q  +KGKGK+ T DE+YEEF+K +E+L LLE+E  R KK+ KV MKKK L+A
Sbjct: 53  VEKVSQCAKKGKGKEKTLDEYYEEFQKEIEDLCLLEEEGSRNKKEGKVTMKKKTLRA 109

[Close]

BLAST of MELO3C019249 vs. ExPASy TrEMBL
Match: A0A5D3CVF0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00030 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.2e-07
Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 0


Query: 1   MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKALK 57
           +EKV    +K KGK+ T +EH EEFEK +ENL  LE+EA RPKKKRKV MKKK LK
Sbjct: 51  VEKVVHSAKKDKGKEKTQEEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMKKKTLK 106

The following BLAST results are available for this feature:

BLAST of MELO3C019249 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK15837.1	6.0e-08	69.09	hypothetical protein E5676_scaffold637G00080 [Cucumis melo var. makuwa]	[more]
KAA0066500.1	1.0e-07	60.71	protein MNN4-like [Cucumis melo var. makuwa] >TYK06141.1 protein MNN4-like [Cucu...	[more]
KAA0048705.1	5.0e-07	64.29	protein MNN4-like [Cucumis melo var. makuwa]	[more]
KAA0065695.1	6.6e-07	59.65	hypothetical protein E6C27_scaffold90G001660 [Cucumis melo var. makuwa] >TYK1444...	[more]
TYK15833.1	8.6e-07	64.29	protein MNN4-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C019249 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C019249 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CV96	2.9e-08	69.09	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C2J1	4.9e-08	60.71	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold572G00...	[more]
A0A5A7U502	2.4e-07	64.29	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G0...	[more]
A0A5A7VIU5	3.2e-07	59.65	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3CVF0	4.2e-07	64.29	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00...	[more]

BLAST of MELO3C019249 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 18..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019249.1	MELO3C019249.1	mRNA