MELO3C019203 (gene) Melon (DHL92) v4

Overview


Name	MELO3C019203
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Threonine synthase
Location	chr01: 18446595 .. 18447353 (-)
RNA-Seq Expression	MELO3C019203
Synteny	MELO3C019203

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGATTTATGGGTTAAACATTGTGGGATTAGCCATACTGGGAGTTTCAAGGATTTGGGTATGACTGTTTTGGTTAGCCAAGTGAATCGGTTAAGGAAATTGAAACGTCCTGTCGTCGGAGTCAGTTGTGCATCTTCCGGCGATACATCGGCTGCATTATTGGCTTACTGCGCTTCTGCAAGGATTCCTTCCATTGTCTTCCTTCCAGCAAATAAGATTTCCATGGCACAGCTTGTTCAACCCATTGGTAATGGAGATTTTGTGTTGAGTATAGACACAGATTTTGATGGCTGTATGAAGTTAATAAGAGAAGTTACAGCAGAATTGCCAATTTATTTAGCTAATTCTTTGAATAGTTTGAGACTTGAAGGACAAAAAACAGCAGCTATTGAAATTCTACAATAATTTGATTGGGGAGTACCTGAATGGGTGATTGTTCCTGGAGGGAATCTTGGTAACATTTATGCATTTTACAAAGGTTTCAAGATGTGTCAACAACTTGGCCTTGTTGATAAAATTCCAAGGCTTGTTTGTGCTCAAGCAGCCAATGCAAATCCTTTGTATTTACATTACAAATCTGGTTGGAAAGATTTCAAGGCTGTGAAAGCAAGTTCAACTTTTGCTTCCGCCATTTAGATTGGAGATCCGGTTTCTATAGACCGAGCTATTTACGCATTGCAGAATTCAAATGGCATTGTTGAGGAAGCAACCGAGGAGGAACTTATGGATGCAATGGCACAAGCTATCCAGAGCTAG

mRNA sequence

ATGAATGATTTATGGGTTAAACATTGTGGGATTAGCCATACTGGGAGTTTCAAGGATTTGGGTATGACTGTTTTGGTTAGCCAAGTGAATCGGTTAAGGAAATTGAAACGTCCTGTCGTCGGAGTCAGTTGTGCATCTTCCGGCGATACATCGGCTGCATTATTGGCTTACTGCGCTTCTGCAAGGATTCCTTCCATTGTCTTCCTTCCAGCAAATAAGATTTCCATGGCACAGCTTGTTCAACCCATTGGTAATGGAGATTTTGTGTTGAGTATAGACACAGATTTTGATGGCTTACCTGAATGGGTGATTGTTCCTGGAGGGAATCTTGGTAACATTTATGCATTTTACAAAGGTTTCAAGATGTGTCAACAACTTGGCCTTGTTGATAAAATTCCAAGGCTTGTTTGTGCTCAAGCAGCCAATGCAAATCCTTTGTATTTACATTACAAATCTGGTTGGAAAGATTTCAAGGCTGTGAAAGCAAGTTCAACTTTTGCTTCCGCCATTTAGATTGGAGATCCGGTTTCTATAGACCGAGCTATTTACGCATTGCAGAATTCAAATGGCATTGTTGAGGAAGCAACCGAGGAGGAACTTATGGATGCAATGGCACAAGCTATCCAGAGCTAG

Coding sequence (CDS)

ATGAATGATTTATGGGTTAAACATTGTGGGATTAGCCATACTGGGAGTTTCAAGGATTTGGGTATGACTGTTTTGGTTAGCCAAGTGAATCGGTTAAGGAAATTGAAACGTCCTGTCGTCGGAGTCAGTTGTGCATCTTCCGGCGATACATCGGCTGCATTATTGGCTTACTGCGCTTCTGCAAGGATTCCTTCCATTGTCTTCCTTCCAGCAAATAAGATTTCCATGGCACAGCTTGTTCAACCCATTGGTAATGGAGATTTTGTGTTGAGTATAGACACAGATTTTGATGGCTTACCTGAATGGGTGATTGTTCCTGGAGGGAATCTTGGTAACATTTATGCATTTTACAAAGGTTTCAAGATGTGTCAACAACTTGGCCTTGTTGATAAAATTCCAAGGCTTGTTTGTGCTCAAGCAGCCAATGCAAATCCTTTGTATTTACATTACAAATCTGGTTGGAAAGATTTCAAGGCTGTGAAAGCAAGTTCAACTTTTGCTTCCGCCATTTAG

Protein sequence

MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCASARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGFKMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI

Homology

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BLAST of MELO3C019203 vs. NCBI nr
Match: TYK27135.1 (threonine synthase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 347.8 bits (891), Expect = 5.2e-92
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGV CASSGDTSAALLAYCAS
Sbjct: 190 MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVGCASSGDTSAALLAYCAS 249

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 120
           ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF
Sbjct: 250 ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 309

Query: 121 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 171
           KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI
Sbjct: 310 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 359

[Close]

BLAST of MELO3C019203 vs. NCBI nr
Match: KAA0057146.1 (threonine synthase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 347.8 bits (891), Expect = 5.2e-92
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGV CASSGDTSAALLAYCAS
Sbjct: 190 MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVGCASSGDTSAALLAYCAS 249

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 120
           ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF
Sbjct: 250 ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 309

Query: 121 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 171
           KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI
Sbjct: 310 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 359

[Close]

BLAST of MELO3C019203 vs. NCBI nr
Match: KAA0058933.1 (threonine synthase 1 [Cucumis melo var. makuwa] >TYK23699.1 threonine synthase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 346.3 bits (887), Expect = 1.5e-91
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGV CASSGDTSAALLAYCAS
Sbjct: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVGCASSGDTSAALLAYCAS 60

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 120
           ARIPSIVFLPANKISMAQLVQPIGNG+FVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF
Sbjct: 61  ARIPSIVFLPANKISMAQLVQPIGNGEFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 120

Query: 121 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 171
           KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI
Sbjct: 121 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 170

[Close]

BLAST of MELO3C019203 vs. NCBI nr
Match: KAA0056033.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 5.1e-87
Identity = 163/170 (95.88%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHC ISHT SFKDLGM VLVSQVNRLRKLKRPVVGV CASSGDTSAALLAYCAS
Sbjct: 190 MNDLWVKHCRISHTESFKDLGMIVLVSQVNRLRKLKRPVVGVGCASSGDTSAALLAYCAS 249

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 120
           ARIPSIVFLPANKISMAQLVQPI NG FVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF
Sbjct: 250 ARIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 309

Query: 121 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 171
           KMCQQLGL DKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI
Sbjct: 310 KMCQQLGLDDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 359

[Close]

BLAST of MELO3C019203 vs. NCBI nr
Match: XP_011660008.1 (threonine synthase, chloroplastic [Cucumis sativus] >KGN66271.1 hypothetical protein Csa_006965 [Cucumis sativus])

HSP 1 Score: 312.4 bits (799), Expect = 2.4e-81
Identity = 161/212 (75.94%), Postives = 165/212 (77.83%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGV CAS+GDTSAAL AYCAS
Sbjct: 190 MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVGCASTGDTSAALSAYCAS 249

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFD----------------------- 120
           A IPSIVFLPANKISMAQLVQPI NG FVLSIDTDFD                       
Sbjct: 250 AGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREVTAELPIYLANSLNS 309

Query: 121 -------------------GLPEWVIVPGGNLGNIYAFYKGFKMCQQLGLVDKIPRLVCA 171
                              G+PEWVIVPGGNLGNIYAFYKGFKMCQ+LGLVD+IPRLVCA
Sbjct: 310 LRLEGQKTAAIEILQQFDWGVPEWVIVPGGNLGNIYAFYKGFKMCQELGLVDRIPRLVCA 369

[Close]

BLAST of MELO3C019203 vs. ExPASy Swiss-Prot
Match: Q9S7B5 (Threonine synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS1 PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.9e-81
Identity = 154/212 (72.64%), Postives = 163/212 (76.89%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRK+KRPVVGV CAS+GDTSAAL AYCAS
Sbjct: 186 MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCAS 245

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDG---------------------- 120
           A IPSIVFLPANKISMAQLVQPI NG FVLSIDTDFDG                      
Sbjct: 246 AGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREITAELPIYLANSLNS 305

Query: 121 --------------------LPEWVIVPGGNLGNIYAFYKGFKMCQQLGLVDKIPRLVCA 171
                               +P+WVIVPGGNLGNIYAFYKGFKMCQ+LGLVD+IPR+VCA
Sbjct: 306 LRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVDRIPRMVCA 365

[Close]

BLAST of MELO3C019203 vs. ExPASy Swiss-Prot
Match: Q9MT28 (Threonine synthase, chloroplastic OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.8e-80
Identity = 152/212 (71.70%), Postives = 162/212 (76.42%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           M DLWVKHCGISHTGSFKDLGMTVLVSQVNRLRK+ +PVVGV CAS+GDTSAAL AYCAS
Sbjct: 179 MTDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMHKPVVGVGCASTGDTSAALSAYCAS 238

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDG---------------------- 120
           A IPSIVFLPANKISMAQLVQPI NG FVLSIDTDFDG                      
Sbjct: 239 AGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNS 298

Query: 121 --------------------LPEWVIVPGGNLGNIYAFYKGFKMCQQLGLVDKIPRLVCA 171
                               +PEWVIVPGGNLGNIYAFYKGF+MC++LGLVD+IPRLVCA
Sbjct: 299 LRLEGQKTAAIEILQQFDWEVPEWVIVPGGNLGNIYAFYKGFQMCKELGLVDRIPRLVCA 358

[Close]

BLAST of MELO3C019203 vs. ExPASy Swiss-Prot
Match: Q9SSP5 (Threonine synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS2 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-75
Identity = 146/213 (68.54%), Postives = 161/213 (75.59%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGM+VLVSQVNRLRK+ +PV+GV CAS+GDTSAAL AYCAS
Sbjct: 177 MNDLWVKHCGISHTGSFKDLGMSVLVSQVNRLRKMNKPVIGVGCASTGDTSAALSAYCAS 236

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDG---------------------- 120
           A IPSIVFLPA+KISMAQLVQPI NG FVLSIDTDFDG                      
Sbjct: 237 AGIPSIVFLPADKISMAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLANSLNS 296

Query: 121 --------------------LPEWVIVPGGNLGNIYAFYKGFKMCQQLGLVDKIPRLVCA 171
                               +P+WVIVPGGNLGNIYAFYKGF MC++LGLVD+IPRLVCA
Sbjct: 297 LRLEGQKTAAIEILQQFNWQVPDWVIVPGGNLGNIYAFYKGFHMCKELGLVDRIPRLVCA 356

[Close]

BLAST of MELO3C019203 vs. ExPASy Swiss-Prot
Match: Q8TQD4 (Threonine synthase OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=thrC PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.7e-22
Identity = 71/209 (33.97%), Postives = 105/209 (50.24%), Query Frame = 0


Query: 4   LWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCASARI 63
           L+VKH G++ TGSFKD GMTV V+     + L+  +  V+CAS+G+TSAAL  Y A A I
Sbjct: 90  LYVKHEGMNPTGSFKDRGMTVGVT-----KALELGMNTVACASTGNTSAALAIYGAKAGI 149

Query: 64  PSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDG------------------------- 123
           P +V LPA K+++ ++ Q + +G  VLSI  +FD                          
Sbjct: 150 PVVVLLPAGKVALGKVAQALMHGAKVLSIRGNFDDALALVRTLCSQEKIYLLNSINPYRL 209

Query: 124 -----------------LPEWVIVPGGNLGNIYAFYKGFKMCQQLGLVDKIPRLVCAQAA 171
                            +P+ +++P GN GNI A YKGF+  + LG+ D +P++   QA 
Sbjct: 210 EGQKTIGFEIADQLDFKVPDRIVLPVGNAGNITAIYKGFREFKILGITDSLPKMTGIQAE 269

[Close]

BLAST of MELO3C019203 vs. ExPASy Swiss-Prot
Match: Q58860 (Threonine synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=thrC PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 70/212 (33.02%), Postives = 103/212 (48.58%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           + +L+VK+ G + TGSFKD GMTV V++ N L      V  V CAS+G+TSA+L AY A 
Sbjct: 89  IKELYVKNEGANPTGSFKDRGMTVGVTRANEL-----GVEVVGCASTGNTSASLAAYSAR 148

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDG---------------------- 120
           +    IV LP  K+++ +L Q +  G  V+ +  +FD                       
Sbjct: 149 SGKKCIVLLPEGKVALGKLAQAMFYGAKVIQVKGNFDDALDMVKQLAKEKLIYLLNSINP 208

Query: 121 --------------------LPEWVIVPGGNLGNIYAFYKGFKMCQQLGLVDKIPRLVCA 171
                               +P+ VIVP GN GNI A +KGFK  +  G++D++P++   
Sbjct: 209 FRLEGQKTIAFEICDQLNWQVPDRVIVPVGNAGNISAIWKGFKEFEITGIIDELPKMTGI 268

[Close]

BLAST of MELO3C019203 vs. ExPASy TrEMBL
Match: A0A5A7USK5 (Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold741G00070 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.5e-92
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGV CASSGDTSAALLAYCAS
Sbjct: 190 MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVGCASSGDTSAALLAYCAS 249

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 120
           ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF
Sbjct: 250 ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 309

Query: 121 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 171
           KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI
Sbjct: 310 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 359

[Close]

BLAST of MELO3C019203 vs. ExPASy TrEMBL
Match: A0A5D3DUZ0 (Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1920G00050 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.5e-92
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGV CASSGDTSAALLAYCAS
Sbjct: 190 MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVGCASSGDTSAALLAYCAS 249

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 120
           ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF
Sbjct: 250 ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 309

Query: 121 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 171
           KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI
Sbjct: 310 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 359

[Close]

BLAST of MELO3C019203 vs. ExPASy TrEMBL
Match: A0A5A7USM5 (Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00030 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 7.4e-92
Identity = 168/170 (98.82%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGV CASSGDTSAALLAYCAS
Sbjct: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVGCASSGDTSAALLAYCAS 60

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 120
           ARIPSIVFLPANKISMAQLVQPIGNG+FVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF
Sbjct: 61  ARIPSIVFLPANKISMAQLVQPIGNGEFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 120

Query: 121 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 171
           KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI
Sbjct: 121 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 170

[Close]

BLAST of MELO3C019203 vs. ExPASy TrEMBL
Match: A0A5A7UJB3 (Pyridoxal-5'-phosphate-dependent enzyme family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001880 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.4e-87
Identity = 163/170 (95.88%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHC ISHT SFKDLGM VLVSQVNRLRKLKRPVVGV CASSGDTSAALLAYCAS
Sbjct: 190 MNDLWVKHCRISHTESFKDLGMIVLVSQVNRLRKLKRPVVGVGCASSGDTSAALLAYCAS 249

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 120
           ARIPSIVFLPANKISMAQLVQPI NG FVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF
Sbjct: 250 ARIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGLPEWVIVPGGNLGNIYAFYKGF 309

Query: 121 KMCQQLGLVDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 171
           KMCQQLGL DKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI
Sbjct: 310 KMCQQLGLDDKIPRLVCAQAANANPLYLHYKSGWKDFKAVKASSTFASAI 359

[Close]

BLAST of MELO3C019203 vs. ExPASy TrEMBL
Match: A0A5A7UKY2 (Threonine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001890 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 161/212 (75.94%), Postives = 165/212 (77.83%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGV CAS+GDTSAAL AYCAS
Sbjct: 190 MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVGCASTGDTSAALSAYCAS 249

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFD----------------------- 120
           A IPSIVFLPANKISMAQLVQPI NG FVLSIDTDFD                       
Sbjct: 250 AGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREVTAELPIYLANSLNS 309

Query: 121 -------------------GLPEWVIVPGGNLGNIYAFYKGFKMCQQLGLVDKIPRLVCA 171
                              G+PEWVIVPGGNLGNIYAFYKGFKMCQ+LGLVD+IPRLVCA
Sbjct: 310 LRLEGQKTAAIEILQQFDWGVPEWVIVPGGNLGNIYAFYKGFKMCQELGLVDRIPRLVCA 369

[Close]

BLAST of MELO3C019203 vs. TAIR 10
Match: AT4G29840.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein )

HSP 1 Score: 303.1 bits (775), Expect = 1.4e-82
Identity = 154/212 (72.64%), Postives = 163/212 (76.89%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRK+KRPVVGV CAS+GDTSAAL AYCAS
Sbjct: 186 MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCAS 245

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDG---------------------- 120
           A IPSIVFLPANKISMAQLVQPI NG FVLSIDTDFDG                      
Sbjct: 246 AGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREITAELPIYLANSLNS 305

Query: 121 --------------------LPEWVIVPGGNLGNIYAFYKGFKMCQQLGLVDKIPRLVCA 171
                               +P+WVIVPGGNLGNIYAFYKGFKMCQ+LGLVD+IPR+VCA
Sbjct: 306 LRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVDRIPRMVCA 365

[Close]

BLAST of MELO3C019203 vs. TAIR 10
Match: AT1G72810.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein )

HSP 1 Score: 283.9 bits (725), Expect = 8.6e-77
Identity = 146/213 (68.54%), Postives = 161/213 (75.59%), Query Frame = 0


Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLKRPVVGVSCASSGDTSAALLAYCAS 60
           MNDLWVKHCGISHTGSFKDLGM+VLVSQVNRLRK+ +PV+GV CAS+GDTSAAL AYCAS
Sbjct: 177 MNDLWVKHCGISHTGSFKDLGMSVLVSQVNRLRKMNKPVIGVGCASTGDTSAALSAYCAS 236

Query: 61  ARIPSIVFLPANKISMAQLVQPIGNGDFVLSIDTDFDG---------------------- 120
           A IPSIVFLPA+KISMAQLVQPI NG FVLSIDTDFDG                      
Sbjct: 237 AGIPSIVFLPADKISMAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLANSLNS 296

Query: 121 --------------------LPEWVIVPGGNLGNIYAFYKGFKMCQQLGLVDKIPRLVCA 171
                               +P+WVIVPGGNLGNIYAFYKGF MC++LGLVD+IPRLVCA
Sbjct: 297 LRLEGQKTAAIEILQQFNWQVPDWVIVPGGNLGNIYAFYKGFHMCKELGLVDRIPRLVCA 356

The following BLAST results are available for this feature:

BLAST of MELO3C019203 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK27135.1	5.2e-92	99.41	threonine synthase 1 [Cucumis melo var. makuwa]	[more]
KAA0057146.1	5.2e-92	99.41	threonine synthase 1 [Cucumis melo var. makuwa]	[more]
KAA0058933.1	1.5e-91	98.82	threonine synthase 1 [Cucumis melo var. makuwa] >TYK23699.1 threonine synthase 1...	[more]
KAA0056033.1	5.1e-87	95.88	Pyridoxal-5'-phosphate-dependent enzyme family protein [Cucumis melo var. makuwa...	[more]
XP_011660008.1	2.4e-81	75.94	threonine synthase, chloroplastic [Cucumis sativus] >KGN66271.1 hypothetical pro...	[more]

BLAST of MELO3C019203 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7B5	1.9e-81	72.64	Threonine synthase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS1 PE=1 ...	[more]
Q9MT28	4.8e-80	71.70	Threonine synthase, chloroplastic OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9SSP5	1.2e-75	68.54	Threonine synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TS2 PE=1 ...	[more]
Q8TQD4	2.7e-22	33.97	Threonine synthase OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 /...	[more]
Q58860	1.3e-21	33.02	Threonine synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 266...	[more]

BLAST of MELO3C019203 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7USK5	2.5e-92	99.41	Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold741...	[more]
A0A5D3DUZ0	2.5e-92	99.41	Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold192...	[more]
A0A5A7USM5	7.4e-92	98.82	Threonine synthase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold160...	[more]
A0A5A7UJB3	2.4e-87	95.88	Pyridoxal-5'-phosphate-dependent enzyme family protein OS=Cucumis melo var. maku...	[more]
A0A5A7UKY2	1.2e-81	75.94	Threonine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G0...	[more]

BLAST of MELO3C019203 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29840.1	1.4e-82	72.64	Pyridoxal-5'-phosphate-dependent enzyme family protein	[more]
AT1G72810.1	8.6e-77	68.54	Pyridoxal-5'-phosphate-dependent enzyme family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 81..170 e-value: 1.1E-19 score: 72.6
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 21..73 e-value: 1.3E-11 score: 46.3
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 3..20 e-value: 1.3E-11 score: 46.3
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 2..170
IPR001926	Pyridoxal-phosphate dependent enzyme	PFAM	PF00291	PALP	coord: 3..74 e-value: 1.1E-12 score: 47.9
None	No IPR available	PANTHER	PTHR10314	CYSTATHIONINE BETA-SYNTHASE	coord: 100..169 coord: 8..98
None	No IPR available	PANTHER	PTHR10314:SF176	THREONINE SYNTHASE, CHLOROPLASTIC-LIKE ISOFORM X1	coord: 100..169 coord: 8..98
IPR000634	Serine/threonine dehydratase, pyridoxal-phosphate-binding site	PROSITE	PS00165	DEHYDRATASE_SER_THR	coord: 8..22

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019203.1	MELO3C019203.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006520	cellular amino acid metabolic process
molecular_function	GO:0030170	pyridoxal phosphate binding