MELO3C019081.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C019081.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Unknown protein
Location	chr08: 11275226 .. 11275405 (+)
RNA-Seq Expression	MELO3C019081.jh1
Synteny	MELO3C019081.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAAAGTCCCCACGCACAAGAAACCTCACGTCCTCCCACCACCAGATGGTCGAACTCCACCTTCAGCCTCGTCTGCAAACACCACCGACCATCTCCAAACGTTGTCTGTCACTGGCAATCGTCGCTCATCGTTCATATCTGGAAATCCTCGTTCGTCGTCGGCGGTGTTTCATCAG

mRNA sequence

ATGCAAAAAGTCCCCACGCACAAGAAACCTCACGTCCTCCCACCACCAGATGGTCGAACTCCACCTTCAGCCTCGTCTGCAAACACCACCGACCATCTCCAAACGTTGTCTGTCACTGGCAATCGTCGCTCATCGTTCATATCTGGAAATCCTCGTTCGTCGTCGGCGGTGTTTCATCAG

Coding sequence (CDS)

ATGCAAAAAGTCCCCACGCACAAGAAACCTCACGTCCTCCCACCACCAGATGGTCGAACTCCACCTTCAGCCTCGTCTGCAAACACCACCGACCATCTCCAAACGTTGTCTGTCACTGGCAATCGTCGCTCATCGTTCATATCTGGAAATCCTCGTTCGTCGTCGGCGGTGTTTCATCAG

Protein sequence

MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ

Homology

[Close]

BLAST of MELO3C019081.jh1 vs. NCBI nr
Match: TYK26887.1 (hypothetical protein E5676_scaffold7319G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (305), Expect = 1.41e-33
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60
          MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ
Sbjct: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60

[Close]

BLAST of MELO3C019081.jh1 vs. NCBI nr
Match: KAA0025966.1 (hypothetical protein E6C27_scaffold34G002810 [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (305), Expect = 1.41e-33
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60
          MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ
Sbjct: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60

[Close]

BLAST of MELO3C019081.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DSZ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold7319G00010 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 6.80e-34
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60
          MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ
Sbjct: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60

[Close]

BLAST of MELO3C019081.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SJI4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002810 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 6.80e-34
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60
          MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ
Sbjct: 1  MQKVPTHKKPHVLPPPDGRTPPSASSANTTDHLQTLSVTGNRRSSFISGNPRSSSAVFHQ 60

The following BLAST results are available for this feature:

BLAST of MELO3C019081.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK26887.1	1.41e-33	100.00	hypothetical protein E5676_scaffold7319G00010 [Cucumis melo var. makuwa]	[more]
KAA0025966.1	1.41e-33	100.00	hypothetical protein E6C27_scaffold34G002810 [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C019081.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C019081.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DSZ1	6.80e-34	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SJI4	6.80e-34	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C019081.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019081.jh1.t1	MELO3C019081.jh1.t1	mRNA