MELO3C019070 (gene) Melon (DHL92) v4

Overview


Name	MELO3C019070
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr08: 11245502 .. 11245660 (-)
RNA-Seq Expression	MELO3C019070
Synteny	MELO3C019070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATTGAAAAGTGTTTGGCTGAGAGAGATGAAGAGAAAATGTCGAAAGGAGAGAAGTCAAGCCTGAGGGTGGACAAAGGAAAAGAAAAGGAAATAAGCGAGGAAGCACGGGCCAAGTCATACTTTAGTCAAAGATCGTATTGGTTCGATGATTAG

mRNA sequence

ATGGGCATTGAAAAGTGTTTGGCTGAGAGAGATGAAGAGAAAATGTCGAAAGGAGAGAAGTCAAGCCTGAGGGTGGACAAAGGAAAAGAAAAGGAAATAAGCGAGGAAGCACGGGCCAAGTCATACTTTAGTCAAAGATCGTATTGGTTCGATGATTAG

Coding sequence (CDS)

ATGGGCATTGAAAAGTGTTTGGCTGAGAGAGATGAAGAGAAAATGTCGAAAGGAGAGAAGTCAAGCCTGAGGGTGGACAAAGGAAAAGAAAAGGAAATAAGCGAGGAAGCACGGGCCAAGTCATACTTTAGTCAAAGATCGTATTGGTTCGATGATTAG

Protein sequence

MGIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEARAKSYFSQRSYWFDD

Homology

[Close]

BLAST of MELO3C019070 vs. ExPASy TrEMBL
Match: A0A5A7UMQ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G00090 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.1e-04
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 4   EKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFD 52
           EKCLAE DEEKM K EKSS R+D+ KEK  S+E    AKS FSQR +WFD
Sbjct: 185 EKCLAEGDEEKMLKEEKSSPRMDRAKEKGGSKEVDEWAKSCFSQRLHWFD 234

[Close]

BLAST of MELO3C019070 vs. ExPASy TrEMBL
Match: A0A5D3BN18 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G001040 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.1e-04
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 4   EKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFD 52
           EKCLAE DEEKM K EKSS R+D+ KEK  S+E    AKS FSQR +WFD
Sbjct: 193 EKCLAEGDEEKMLKEEKSSPRMDRAKEKGGSKEVDEWAKSCFSQRLHWFD 242

The following BLAST results are available for this feature:

BLAST of MELO3C019070 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C019070 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C019070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMQ3	5.1e-04	66.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BN18	5.1e-04	66.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MELO3C019070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019070.1	MELO3C019070.1	mRNA