MELO3C018984 (gene) Melon (DHL92) v4

Overview
NameMELO3C018984
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr07: 14567386 .. 14567817 (+)
RNA-Seq ExpressionMELO3C018984
SyntenyMELO3C018984
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAAGAATGTCGCGTCAAGACTCTTGAGAAGAACAAGGTTGAAGAAGAAGAAATTGAGAAAACTTCTTTGCCACCTCCACCAGTTAAGAGAAAGGCCAAGTCAACCCAAACACCACTTGCGAAGAAACTAAAGGTTAACACGGCCATAGATAAAGACCCCGCAAGTAACCCCTCTCGCAAAAAGAAAGTGATTGAAAAGAAAGTACATCTTGTGGGAAGCATCTCTTCGTCAAATGCTTTACAAGACCCACCTTCTCCGTCAAAGAATGAAAATCGTTCATTTCTTCCTCACCATGAGGACATACCTCTACCCTCTCCTACAAATGATAACTTTTCGACTTCCCCACCAAAACAAACACTTTCCACCTTGCCTCCTTGCAACGATCCATCACCGCCTCCACTAAAATCACCAATCTCCTCCAGTTAG

mRNA sequence

ATGGAGGAAGAATGTCGCGTCAAGACTCTTGAGAAGAACAAGGTTGAAGAAGAAGAAATTGAGAAAACTTCTTTGCCACCTCCACCAGTTAAGAGAAAGGCCAAGTCAACCCAAACACCACTTGCGAAGAAACTAAAGGTTAACACGGCCATAGATAAAGACCCCGCAAGTAACCCCTCTCGCAAAAAGAAAGTGATTGAAAAGAAAGTACATCTTGTGGGAAGCATCTCTTCGTCAAATGCTTTACAAGACCCACCTTCTCCGTCAAAGAATGAAAATCGTTCATTTCTTCCTCACCATGAGGACATACCTCTACCCTCTCCTACAAATGATAACTTTTCGACTTCCCCACCAAAACAAACACTTTCCACCTTGCCTCCTTGCAACGATCCATCACCGCCTCCACTAAAATCACCAATCTCCTCCAGTTAG

Coding sequence (CDS)

ATGGAGGAAGAATGTCGCGTCAAGACTCTTGAGAAGAACAAGGTTGAAGAAGAAGAAATTGAGAAAACTTCTTTGCCACCTCCACCAGTTAAGAGAAAGGCCAAGTCAACCCAAACACCACTTGCGAAGAAACTAAAGGTTAACACGGCCATAGATAAAGACCCCGCAAGTAACCCCTCTCGCAAAAAGAAAGTGATTGAAAAGAAAGTACATCTTGTGGGAAGCATCTCTTCGTCAAATGCTTTACAAGACCCACCTTCTCCGTCAAAGAATGAAAATCGTTCATTTCTTCCTCACCATGAGGACATACCTCTACCCTCTCCTACAAATGATAACTTTTCGACTTCCCCACCAAAACAAACACTTTCCACCTTGCCTCCTTGCAACGATCCATCACCGCCTCCACTAAAATCACCAATCTCCTCCAGTTAG

Protein sequence

MEEECRVKTLEKNKVEEEEIEKTSLPPPPVKRKAKSTQTPLAKKLKVNTAIDKDPASNPSRKKKVIEKKVHLVGSISSSNALQDPPSPSKNENRSFLPHHEDIPLPSPTNDNFSTSPPKQTLSTLPPCNDPSPPPLKSPISSS
Homology
BLAST of MELO3C018984 vs. NCBI nr
Match: KAA0060803.1 (hypothetical protein E6C27_scaffold137G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-05
Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 0

Query: 2   EEECRVKTLEKNKVEEEEIEKTSLPP-PPVKRKAKSTQTPLAKKLKVNTAIDKDPASNPS 61
           EEE R+KTL K K+ E E E    PP PP+KRK  ++ +  AKKLKV+   +     NP 
Sbjct: 43  EEERRLKTLRKEKIFETENEDFDAPPLPPLKRKNAASHSSSAKKLKVDAVKETTMEDNPP 102

Query: 62  RKKKVIEKKVHLVGSISSSNALQD-PPSPSKNENRSFLPHHEDIPLPSPTNDNFSTSPPK 121
             +K++ K + L  ++S+S+  +D  PSP++N+     P  ++ P P   N+N       
Sbjct: 103 YCRKLVSKMLPLGENVSTSHQSRDHAPSPARNDEPP--PSQDNHPPPDSPNNN------- 162

Query: 122 QTLSTLPPCNDPSPPPLKSPIS 142
           QT S L   NDP  PP KS IS
Sbjct: 163 QTFSRLSLHNDPPLPPHKSSIS 175

BLAST of MELO3C018984 vs. NCBI nr
Match: KAA0040817.1 (hypothetical protein E6C27_scaffold333G00350 [Cucumis melo var. makuwa] >TYK17794.1 hypothetical protein E5676_scaffold306G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-04
Identity = 48/128 (37.50%), Postives = 66/128 (51.56%), Query Frame = 0

Query: 2   EEECRVKTLEKNKVEEEEIEKTSLPPPPVKRKAKSTQTPLAKKLKVNTAIDKDPASNPSR 61
           EEE  +KTL K K+EE+    TS PPP +KRK +ST +P  K  KV++AI     ++P +
Sbjct: 62  EEERCIKTLGKKKLEEDSEGDTSPPPPSLKRKGRSTSSPPIKNAKVDSAIKDVSVNDPPQ 121

Query: 62  K--KKVIEKKVHLVGSISSSNALQDPPSPSKNENRSFLPHHEDIPLPSPTNDNFSTSPPK 121
           K   K+I K+V    S S S  L D  S  +N+     P  ++   P   N     S P 
Sbjct: 122 KNRSKIINKRVIKPTSSSKSKDLYDYSSSQRNKKPGLSPQQKETLSPLRDNIVIPRSLPN 181

Query: 122 QTLSTLPP 128
           Q L  +PP
Sbjct: 182 QNLRVIPP 189

BLAST of MELO3C018984 vs. NCBI nr
Match: TYK14602.1 (hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 2.6e-04
Identity = 41/90 (45.56%), Postives = 51/90 (56.67%), Query Frame = 0

Query: 2   EEECRVKTLEKNKVEEEEIEKTSLPPPPVKRKAKSTQTPLAKKLKVNTAIDKDPASNPSR 61
           EEE  +KTL K+K +E E    S  PPP+KR AKST TP  KKLKV+  ++K  AS P  
Sbjct: 31  EEEHHLKTLGKDKADEGEDGNKSRTPPPLKRNAKSTLTPPVKKLKVDATVEKASASKPPH 90

Query: 62  KKKVIEKKVHLVGSISSSNALQDPPSPSKN 92
            KKV+ K+     S   S    DP  P+ N
Sbjct: 91  SKKVVSKR--RPNSPHQSPKDNDPLRPNLN 118

BLAST of MELO3C018984 vs. ExPASy TrEMBL
Match: A0A5A7UXW6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00250 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05
Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 0

Query: 2   EEECRVKTLEKNKVEEEEIEKTSLPP-PPVKRKAKSTQTPLAKKLKVNTAIDKDPASNPS 61
           EEE R+KTL K K+ E E E    PP PP+KRK  ++ +  AKKLKV+   +     NP 
Sbjct: 43  EEERRLKTLRKEKIFETENEDFDAPPLPPLKRKNAASHSSSAKKLKVDAVKETTMEDNPP 102

Query: 62  RKKKVIEKKVHLVGSISSSNALQD-PPSPSKNENRSFLPHHEDIPLPSPTNDNFSTSPPK 121
             +K++ K + L  ++S+S+  +D  PSP++N+     P  ++ P P   N+N       
Sbjct: 103 YCRKLVSKMLPLGENVSTSHQSRDHAPSPARNDEPP--PSQDNHPPPDSPNNN------- 162

Query: 122 QTLSTLPPCNDPSPPPLKSPIS 142
           QT S L   NDP  PP KS IS
Sbjct: 163 QTFSRLSLHNDPPLPPHKSSIS 175

BLAST of MELO3C018984 vs. ExPASy TrEMBL
Match: A0A5A7TGV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00400 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.7e-05
Identity = 48/128 (37.50%), Postives = 66/128 (51.56%), Query Frame = 0

Query: 2   EEECRVKTLEKNKVEEEEIEKTSLPPPPVKRKAKSTQTPLAKKLKVNTAIDKDPASNPSR 61
           EEE  +KTL K K+EE+    TS PPP +KRK +ST +P  K  KV++AI     ++P +
Sbjct: 62  EEERCIKTLGKKKLEEDSEGDTSPPPPSLKRKGRSTSSPPIKNAKVDSAIKDVSVNDPPQ 121

Query: 62  K--KKVIEKKVHLVGSISSSNALQDPPSPSKNENRSFLPHHEDIPLPSPTNDNFSTSPPK 121
           K   K+I K+V    S S S  L D  S  +N+     P  ++   P   N     S P 
Sbjct: 122 KNRSKIINKRVIKPTSSSKSKDLYDYSSSQRNKKPGLSPQQKETLSPLRDNIVIPRSLPN 181

Query: 122 QTLSTLPP 128
           Q L  +PP
Sbjct: 182 QNLRVIPP 189

BLAST of MELO3C018984 vs. ExPASy TrEMBL
Match: A0A5D3CT45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001110 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04
Identity = 41/90 (45.56%), Postives = 51/90 (56.67%), Query Frame = 0

Query: 2   EEECRVKTLEKNKVEEEEIEKTSLPPPPVKRKAKSTQTPLAKKLKVNTAIDKDPASNPSR 61
           EEE  +KTL K+K +E E    S  PPP+KR AKST TP  KKLKV+  ++K  AS P  
Sbjct: 31  EEEHHLKTLGKDKADEGEDGNKSRTPPPLKRNAKSTLTPPVKKLKVDATVEKASASKPPH 90

Query: 62  KKKVIEKKVHLVGSISSSNALQDPPSPSKN 92
            KKV+ K+     S   S    DP  P+ N
Sbjct: 91  SKKVVSKR--RPNSPHQSPKDNDPLRPNLN 118

BLAST of MELO3C018984 vs. ExPASy TrEMBL
Match: A0A5D3BAJ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold441G00150 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.3e-04
Identity = 45/114 (39.47%), Postives = 65/114 (57.02%), Query Frame = 0

Query: 31  KRKAKSTQTPLAKKLKVNTAIDKDPASNPSRKKKVIEKKVHLVGSISSSNALQDPPSPSK 90
           K   ++TQTP  KK+KV++  DK   SNP R +K+  K+ HL             P+P  
Sbjct: 179 KEDDRTTQTPHDKKIKVDSTKDKASLSNPPRNRKITSKQNHL---------RSPSPTPKT 238

Query: 91  NENRSFLPHHEDIPLPSPTNDNFS--TSPPKQTLSTLPPCNDPS-PPPLKSPIS 142
            ++ S  P +ED PLP  + ++ S  +SPPK+  + LPP  +P+ PPP KSPIS
Sbjct: 239 PDSSSPPPKNED-PLPPSSKEDTSPPSSPPKKLFTILPPQINPTPPPPQKSPIS 282

BLAST of MELO3C018984 vs. ExPASy TrEMBL
Match: A0A5D3D7S2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00510 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.3e-04
Identity = 44/89 (49.44%), Postives = 49/89 (55.06%), Query Frame = 0

Query: 56  ASNPSRKKKVIEKKVHLVGSISSSNALQDPPSPSKNENRSFLPHHEDIPLPSPTNDN-FS 115
           ASNPSR+KKV+ KKVHLVGSISSS    D           FLP     P P+P N     
Sbjct: 232 ASNPSRRKKVVSKKVHLVGSISSSRESSD----------HFLPPQNKDPPPTPKNHTPHP 291

Query: 116 TSPPKQTLSTLPPCNDPSPPPLKSPISSS 144
             P +QTL  LPP +D  P P KS IS S
Sbjct: 292 LFPQQQTLPILPPYDDQPPSP-KSYISIS 309

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0060803.14.1e-0538.73hypothetical protein E6C27_scaffold137G00250 [Cucumis melo var. makuwa][more]
KAA0040817.11.2e-0437.50hypothetical protein E6C27_scaffold333G00350 [Cucumis melo var. makuwa] >TYK1779... [more]
TYK14602.12.6e-0445.56hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UXW62.0e-0538.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TGV65.7e-0537.50Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CT451.3e-0445.56Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BAJ26.3e-0439.47Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D7S26.3e-0449.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018984.1MELO3C018984.1mRNA