MELO3C018933 (gene) Melon (DHL92) v4

Overview
NameMELO3C018933
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionProtein MNN4-like
Locationchr07: 13390513 .. 13390770 (+)
RNA-Seq ExpressionMELO3C018933
SyntenyMELO3C018933
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAGTGTAAAGCAGATTCCTCAGGTAGAGGTAAAGGATGAGGTTTGGTCAGCCACAACCGTTCACTGCATAATTGGCATCCACAAGAACAGGGCAAAGTTAAAATTCCTTAGAACCAAGCAAGATGGTAAATCTGAGGTTGAAAAAGTGAACGGTGAAGATGAAGATGAGAAAGAAGAAGAAGAAGTCCCACAAAAATGCAAACAACAAAGCAAGGAAGGAGGCCTCTGGATTGAAAAGAGTAAAATCCTCTAA

mRNA sequence

ATGTTCAGTGTAAAGCAGATTCCTCAGGTAGAGGTAAAGGATGAGGTTTGGTCAGCCACAACCGTTCACTGCATAATTGGCATCCACAAGAACAGGGCAAAGTTAAAATTCCTTAGAACCAAGCAAGATGGTAAATCTGAGGTTGAAAAAGTGAACGGTGAAGATGAAGATGAGAAAGAAGAAGAAGAAGTCCCACAAAAATGCAAACAACAAAGCAAGGAAGGAGGCCTCTGGATTGAAAAGAGTAAAATCCTCTAA

Coding sequence (CDS)

ATGTTCAGTGTAAAGCAGATTCCTCAGGTAGAGGTAAAGGATGAGGTTTGGTCAGCCACAACCGTTCACTGCATAATTGGCATCCACAAGAACAGGGCAAAGTTAAAATTCCTTAGAACCAAGCAAGATGGTAAATCTGAGGTTGAAAAAGTGAACGGTGAAGATGAAGATGAGAAAGAAGAAGAAGAAGTCCCACAAAAATGCAAACAACAAAGCAAGGAAGGAGGCCTCTGGATTGAAAAGAGTAAAATCCTCTAA

Protein sequence

MFSVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEEEVPQKCKQQSKEGGLWIEKSKIL
Homology
BLAST of MELO3C018933 vs. NCBI nr
Match: KAA0046046.1 (hypothetical protein E6C27_scaffold243G006200 [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 4.4e-15
Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           ++KQ PQVE+KD VW+ TT+H II +HKN+AK K  +TKQDGKSEVEKV+ E EDEKE+E
Sbjct: 53  TLKQFPQVELKDGVWTVTTLHHIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDE 112

Query: 63  EVPQKCKQ 71
           EVP KCK+
Sbjct: 113 EVPLKCKR 120

BLAST of MELO3C018933 vs. NCBI nr
Match: TYK11921.1 (hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 3.7e-14
Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           +++Q PQVE+KD VW+  T+H II +HKN+AK K  +TKQDGKSEVEKV+ E EDEKE+E
Sbjct: 53  TLEQFPQVELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDE 112

Query: 63  EVPQKCKQQS 73
           EVP KCK+++
Sbjct: 113 EVPLKCKRRN 122

BLAST of MELO3C018933 vs. NCBI nr
Match: KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 3.9e-11
Identity = 38/72 (52.78%), Postives = 60/72 (83.33%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           ++  +PQ+ VKD +WS+ T++ II I++N+AKLK+L+ KQDGKSEV++V+ +DE+EKEE+
Sbjct: 63  ALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKDEEEKEED 122

Query: 63  EVPQKCKQQSKE 75
            VP K K+QS++
Sbjct: 123 NVPLKRKRQSED 134

BLAST of MELO3C018933 vs. NCBI nr
Match: KAA0036868.1 (hypothetical protein E6C27_scaffold20G001780 [Cucumis melo var. makuwa] >TYJ95928.1 hypothetical protein E5676_scaffold110G002410 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 3.3e-10
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 0

Query: 3  SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKE 61
          ++ Q+PQVEVKD +WS+ T+H II +HKN+ KLK L+TK DGKSEVEKV+ E+E EKE
Sbjct: 36 ALDQLPQVEVKDGIWSSVTLHGIIVVHKNKIKLKRLKTKHDGKSEVEKVDDEEEIEKE 93

BLAST of MELO3C018933 vs. NCBI nr
Match: KAA0042322.1 (hypothetical protein E6C27_scaffold795G00160 [Cucumis melo var. makuwa] >TYK15446.1 hypothetical protein E5676_scaffold477G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 9.5e-10
Identity = 39/66 (59.09%), Postives = 55/66 (83.33%), Query Frame = 0

Query: 9  QVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEEEVPQKC 68
          +V+VKD + S+TT+H II ++KN+AKLK L+TKQDGKSEVEKV  E EDEK++++VP K 
Sbjct: 19 EVKVKDGILSSTTLHRIIAVNKNKAKLKCLKTKQDGKSEVEKVEDEHEDEKQKDDVPLKR 78

Query: 69 KQQSKE 75
          K+Q ++
Sbjct: 79 KRQGEK 84

BLAST of MELO3C018933 vs. ExPASy TrEMBL
Match: A0A5A7TV72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G006200 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.1e-15
Identity = 46/68 (67.65%), Postives = 57/68 (83.82%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           ++KQ PQVE+KD VW+ TT+H II +HKN+AK K  +TKQDGKSEVEKV+ E EDEKE+E
Sbjct: 53  TLKQFPQVELKDGVWTVTTLHHIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDE 112

Query: 63  EVPQKCKQ 71
           EVP KCK+
Sbjct: 113 EVPLKCKR 120

BLAST of MELO3C018933 vs. ExPASy TrEMBL
Match: A0A5D3CJD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00890 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.8e-14
Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           +++Q PQVE+KD VW+  T+H II +HKN+AK K  +TKQDGKSEVEKV+ E EDEKE+E
Sbjct: 53  TLEQFPQVELKDGVWTVATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKVDEEAEDEKEDE 112

Query: 63  EVPQKCKQQS 73
           EVP KCK+++
Sbjct: 113 EVPLKCKRRN 122

BLAST of MELO3C018933 vs. ExPASy TrEMBL
Match: A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.9e-11
Identity = 38/72 (52.78%), Postives = 60/72 (83.33%), Query Frame = 0

Query: 3   SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEE 62
           ++  +PQ+ VKD +WS+ T++ II I++N+AKLK+L+ KQDGKSEV++V+ +DE+EKEE+
Sbjct: 63  ALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKDEEEKEED 122

Query: 63  EVPQKCKQQSKE 75
            VP K K+QS++
Sbjct: 123 NVPLKRKRQSED 134

BLAST of MELO3C018933 vs. ExPASy TrEMBL
Match: A0A5A7T268 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002410 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.6e-10
Identity = 37/58 (63.79%), Postives = 48/58 (82.76%), Query Frame = 0

Query: 3  SVKQIPQVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKE 61
          ++ Q+PQVEVKD +WS+ T+H II +HKN+ KLK L+TK DGKSEVEKV+ E+E EKE
Sbjct: 36 ALDQLPQVEVKDGIWSSVTLHGIIVVHKNKIKLKRLKTKHDGKSEVEKVDDEEEIEKE 93

BLAST of MELO3C018933 vs. ExPASy TrEMBL
Match: A0A5D3CYF5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00140 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.6e-10
Identity = 39/66 (59.09%), Postives = 55/66 (83.33%), Query Frame = 0

Query: 9  QVEVKDEVWSATTVHCIIGIHKNRAKLKFLRTKQDGKSEVEKVNGEDEDEKEEEEVPQKC 68
          +V+VKD + S+TT+H II ++KN+AKLK L+TKQDGKSEVEKV  E EDEK++++VP K 
Sbjct: 19 EVKVKDGILSSTTLHRIIAVNKNKAKLKCLKTKQDGKSEVEKVEDEHEDEKQKDDVPLKR 78

Query: 69 KQQSKE 75
          K+Q ++
Sbjct: 79 KRQGEK 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0046046.14.4e-1567.65hypothetical protein E6C27_scaffold243G006200 [Cucumis melo var. makuwa][more]
TYK11921.13.7e-1462.86hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa][more]
KAA0060282.13.9e-1152.78drebrin-like [Cucumis melo var. makuwa][more]
KAA0036868.13.3e-1063.79hypothetical protein E6C27_scaffold20G001780 [Cucumis melo var. makuwa] >TYJ9592... [more]
KAA0042322.19.5e-1059.09hypothetical protein E6C27_scaffold795G00160 [Cucumis melo var. makuwa] >TYK1544... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TV722.1e-1567.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CJD11.8e-1462.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UWQ41.9e-1152.78Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE... [more]
A0A5A7T2681.6e-1063.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CYF54.6e-1059.09Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018933.1MELO3C018933.1mRNA