MELO3C018790 (gene) Melon (DHL92) v4

Overview


Name	MELO3C018790
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr01: 2825457 .. 2828165 (+)
RNA-Seq Expression	MELO3C018790
Synteny	MELO3C018790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCCCTTTTCGCAATTATGTCATTCTTTTCAAAATTCAGCTCTTGTTGGCGGTCAGCGGCGGTGGCGCCGCGTGTCTACCTGGGCGACGCCGTGTCGGAGGAGGTGAAAGCGGAGCAGAGCGTCGTGAGACCGAGGAGTTCGAAGTCGGATTCAGCAGCGCATTGGCAGCCGGCGTTGGATGCCATTGTGGAGGATGGTAAGGGAGCTCAGTCGCGGTGGAAGAAATCCAGGGAAAAGAAGCCGGAGAAGAAGACGTCCGGGCGGCAGGGCAGGTTTATGACTAAGTCGTATGGTTATTACGATGGGAGAGATGATTACTGGTAATTACACTAATTAATTTGTTTCGTATTTAATTAGGAATTCTTAAAAGTTTCATTCACAGCCACATTCTGTTTATTGGTTTTCAGTTTTGATTTTGAATGATTATTGAACAAAATTTTTGTCAAATATGTCTAATAATTAATCATGAATGGATTTGTTCTTTCTTTTTAATAGGAAGATTTTCAAAACAATTTAACAACAGTTGGCACTTATTATTTTGAATTTAAGAATGGAGAAAGGAAAAGTTATTTAAAATGAATAAAACTTCTGGATATTTTTATAAATATAAGAAAATTTCACGATCTATTTGAGATAAACCATTAACAAAATCAATTATTGTATGTATCTATTATGATATAGATAGATACGAATAGTAGTTCATCATGGTCCATTGTAGATCGACAATGATATTTTACTATATTTAAGTTCATCTTTCTATTGTAGAACAATAAATTTTGGACTAATCATAAATTACCACGTCATTTACATGAAAAACACAAATAATTGAATATGAGATTGATTAAAAGTTGACATATGTCCCTAATTGAAATTAAAGTCATAAATTAGCGAACATGTATTTTCATTGACAGTTGGATTAAATTAATTATCTTGGTCAAATTGAATATTATTTATTTGGGCTAACATTCGATTAAGCCAAAGCTTAATTTAGCGCAAATGCTAAATATGACCAAAATCCATATATTTAAGTTATTTTGTAAGTAACTCTTATTACGGGACAATAATTTATTAGTGTATAGTATTAAATAGTTATAAAAAAAATCTAAACGGTAGTAAAGTAAACTAGGTTAAAGTTAAATAAAACTTAGAACAATAGTTAACGACATATAGCATAATTAATTCGCCTTGATTTTTGGATTGATGTTTTCTCACCACACTAGGTATAATATCAATCACGTCAATTATAATTGAGCTAAACACATGTCCACGACTTTTTGAAATTAATTAGTATTTTAAATGTTGCATGTTTAGAATATATTTTCAAATGCTTAATTTGAAAAAACAAATAATTTAGAAAAAGGTTAAAGTATTTAACAATAATTCAAAATAATTTTATAAGCGTATTTTGAATAGCTTTAAATAAAAGAAAGTATTATTTTCTCAGATGAATCAAAACTACGAAAATTGATATATTAATATGAAATTAAATAGAAATCTTGTCGTTTAAAAATGTTGTATTAATAGATTACATCGCTTTATTTTCGTTTTATAAAACAATTTGTTTTTTGTGAATGTAAAAAATTGAAAATTTAGATGATCGGAATTATAGATGTCTGACATTATCTTTAGATTACCATGTTTGTTTTGTATGAATATTTTTGCATATATCTATAAATATTTGATTAATGTATTTGTTTCTTATGATTCATACACGAGAATGTTTTAAATCTACATAATGCCCAAAAATGCCCCCATTACTACTTTTTAAATTTCAATTAGTTTGATATAATTTGAACTTGTACGACATATCTATTTTTATCCATTTGACTTTTTTTAAACTACTATGATGGATATTATTTTTTTCAACAAAATATTATATCATAATTTATGGTTTTTATAAAATAAATATTAATTTAAATTTATGAATTTAGGTTAAAAATAATAAAATTTATGATATAACAAAAAAAAAAAAAAAAACTACCATAACATTATTTAGTAAGTTGACAACATTTATTTCAATTACACATAGATTAATATGTGCGTGTAGAATAAAAAATTAAAAACAAACCAGAATGTAAGATGAATGCATTATGTTTAAAATATAAAAAAAATCACGTTTTGTGACTGTACAAAAAAACTTTTTAGCTACCTTCCATCATAGCATCCTTGGATGCTCGAAATCTCTAGATATCACAATGTTTTAGATTACCACAAAAAAAAACATGATAACTAAGATTTATCGAGAGAAAGTTATATGACAGCGAAACAAACCATCCTTATATAGAGTAAAACATTAAATTAACTTGATTAAGATATTTCTTTTTTAACCATATCTTGGTTTTCTTTGTTAATTTGTAGGAGAAACTCAATGGCTATGGCTATGCCGGCGTTTTCACCGGTACCATCCATGTTTTGAAGGTAAATTTTGATGATTCGAATATATATAACACAGTTGGGCGTCCGAGGAAAACTCAAATGTGATCGAAGTCATCGCTATGTTTCTCTTTCTCCCACCATCGTACGACGTTTTAGATTATGCTAAAAGTTGGCTCGTGTCTTAGTAACATATTGTTAATATGAATATCAATCTTATGTGCTAAAGAAAACCAATTACACATATATGCAGATAGGCCCATCTCTCCACCTTGTGAATGTGCAAATGAATTTTCTAATTATATGTATATTAAATGGTTTTTTTCTTTCTCT

mRNA sequence

GTTTCCCTTTTCGCAATTATGTCATTCTTTTCAAAATTCAGCTCTTGTTGGCGGTCAGCGGCGGTGGCGCCGCGTGTCTACCTGGGCGACGCCGTGTCGGAGGAGGTGAAAGCGGAGCAGAGCGTCGTGAGACCGAGGAGTTCGAAGTCGGATTCAGCAGCGCATTGGCAGCCGGCGTTGGATGCCATTGTGGAGGATGGTAAGGGAGCTCAGTCGCGGTGGAAGAAATCCAGGGAAAAGAAGCCGGAGAAGAAGACGTCCGGGCGGCAGGGCAGGTTTATGACTAAGTCGTATGGTTATTACGATGGGAGAGATGATTACTGGAGAAACTCAATGGCTATGGCTATGCCGGCGTTTTCACCGGTACCATCCATGTTTTGAAGGTAAATTTTGATGATTCGAATATATATAACACAGTTGGGCGTCCGAGGAAAACTCAAATGTGATCGAAGTCATCGCTATGTTTCTCTTTCTCCCACCATCGTACGACGTTTTAGATTATGCTAAAAGTTGGCTCGTGTCTTAGTAACATATTGTTAATATGAATATCAATCTTATGTGCTAAAGAAAACCAATTACACATATATGCAGATAGGCCCATCTCTCCACCTTGTGAATGTGCAAATGAATTTTCTAATTATATGTATATTAAATGGTTTTTTTCTTTCTCT

Coding sequence (CDS)

ATGTCATTCTTTTCAAAATTCAGCTCTTGTTGGCGGTCAGCGGCGGTGGCGCCGCGTGTCTACCTGGGCGACGCCGTGTCGGAGGAGGTGAAAGCGGAGCAGAGCGTCGTGAGACCGAGGAGTTCGAAGTCGGATTCAGCAGCGCATTGGCAGCCGGCGTTGGATGCCATTGTGGAGGATGGTAAGGGAGCTCAGTCGCGGTGGAAGAAATCCAGGGAAAAGAAGCCGGAGAAGAAGACGTCCGGGCGGCAGGGCAGGTTTATGACTAAGTCGTATGGTTATTACGATGGGAGAGATGATTACTGGAGAAACTCAATGGCTATGGCTATGCCGGCGTTTTCACCGGTACCATCCATGTTTTGA

Protein sequence

MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVEDGKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMPAFSPVPSMF

Homology

[Close]

BLAST of MELO3C018790 vs. NCBI nr
Match: XP_008455392.1 (PREDICTED: uncharacterized protein LOC103495564 [Cucumis melo])

HSP 1 Score: 240.7 bits (613), Expect = 6.3e-60
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVED 60
           MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVED
Sbjct: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVED 60

Query: 61  GKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMPAFSPVPSMF 120
           GKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMPAFSPVPSMF
Sbjct: 61  GKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMPAFSPVPSMF 120

[Close]

BLAST of MELO3C018790 vs. NCBI nr
Match: KAA0031624.1 (uncharacterized protein E6C27_scaffold139G003920 [Cucumis melo var. makuwa] >TYK07076.1 uncharacterized protein E5676_scaffold13G003940 [Cucumis melo var. makuwa])

HSP 1 Score: 202.6 bits (514), Expect = 1.9e-48
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVED 60
           MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHW+PALDAIVED
Sbjct: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWRPALDAIVED 60

Query: 61  GKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYW 103
           G+GAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYW
Sbjct: 61  GRGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYW 102

[Close]

BLAST of MELO3C018790 vs. NCBI nr
Match: XP_031745001.1 (uncharacterized protein LOC116405215 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 2.8e-39
Identity = 89/119 (74.79%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 2   SFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVEDG 61
           SF SKF SCWRSAAVAP     DAV++EVKAEQ V  PRSSKS+SAAHW+PAL AIVED 
Sbjct: 3   SFISKFGSCWRSAAVAPH----DAVTDEVKAEQGVTSPRSSKSESAAHWRPALAAIVEDS 62

Query: 62  KGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMPAFSPVPSMF 121
            GA+ R KKS ++K EKKTSG QG F TKSYGYYDGRD+YW N+MAMAMPAFSPVPSMF
Sbjct: 63  NGAEWRCKKSSKRKAEKKTSGHQGSFTTKSYGYYDGRDNYWTNTMAMAMPAFSPVPSMF 117

[Close]

BLAST of MELO3C018790 vs. NCBI nr
Match: XP_038888636.1 (uncharacterized protein LOC120078432 [Benincasa hispida])

HSP 1 Score: 160.6 bits (405), Expect = 8.3e-36
Identity = 88/120 (73.33%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVED 60
           MSFFSKFSSCWRSA VAPRVYL  AV+EEVK EQSV R RSSKS+SAAHW+PAL  I+ED
Sbjct: 1   MSFFSKFSSCWRSAVVAPRVYLDGAVAEEVK-EQSVTRLRSSKSESAAHWRPALADILED 60

Query: 61  GKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMPAFSPVPSMF 120
            KG +S  KKS +KKPEKK SGRQ R +TKSY  + GRD+YW NS+AMAMP FSPVP MF
Sbjct: 61  SKGDRSPVKKSGKKKPEKKMSGRQDRLLTKSYSCH-GRDNYWTNSVAMAMPVFSPVPVMF 118

[Close]

BLAST of MELO3C018790 vs. NCBI nr
Match: XP_022136180.1 (uncharacterized protein LOC111007936 [Momordica charantia])

HSP 1 Score: 104.0 bits (258), Expect = 9.3e-19
Identity = 67/128 (52.34%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 1   MSFFSKFSSCWRS-AAVAPRVYLGDAVSEEV-----KAEQSVVRPRSSKSDSAAHWQPAL 60
           M FFS+F SC RS A VAPR+Y   A ++E        EQ V R R SKS  AAHW+PAL
Sbjct: 1   MKFFSRFGSCCRSPATVAPRLYQDTAPADEPITRARVEEQRVGRMRCSKSGPAAHWRPAL 60

Query: 61  DAIVEDGKGA---QSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMP 120
            AI+ED   A   Q +  KS E+K EKK SGR+ R + KS  Y+ GRDDYW NS  +AMP
Sbjct: 61  SAILEDNNAADAEQFQVNKSGERKLEKKASGRRARAIAKSQSYH-GRDDYWTNSTPVAMP 120

[Close]

BLAST of MELO3C018790 vs. ExPASy TrEMBL
Match: A0A1S3C217 (uncharacterized protein LOC103495564 OS=Cucumis melo OX=3656 GN=LOC103495564 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.1e-60
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVED 60
           MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVED
Sbjct: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVED 60

Query: 61  GKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMPAFSPVPSMF 120
           GKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMPAFSPVPSMF
Sbjct: 61  GKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMPAFSPVPSMF 120

[Close]

BLAST of MELO3C018790 vs. ExPASy TrEMBL
Match: A0A5D3C9U7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003940 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.3e-49
Identity = 100/102 (98.04%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVED 60
           MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHW+PALDAIVED
Sbjct: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWRPALDAIVED 60

Query: 61  GKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYW 103
           G+GAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYW
Sbjct: 61  GRGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYW 102

[Close]

BLAST of MELO3C018790 vs. ExPASy TrEMBL
Match: A0A0A0K279 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044930 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 7.4e-30
Identity = 73/101 (72.28%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 2   SFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVEDG 61
           SF SKF SCWRSAAVAP     DAV++EVKAEQ V  PRSSKS+SAAHW+PAL AIVED 
Sbjct: 3   SFISKFGSCWRSAAVAPH----DAVTDEVKAEQGVTSPRSSKSESAAHWRPALAAIVEDS 62

Query: 62  KGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYW 103
            GA+ R KKS ++K EKKTSG QG F TKSYGYYDGRD+YW
Sbjct: 63  NGAEWRCKKSSKRKAEKKTSGHQGSFTTKSYGYYDGRDNYW 99

[Close]

BLAST of MELO3C018790 vs. ExPASy TrEMBL
Match: A0A6J1C360 (uncharacterized protein LOC111007936 OS=Momordica charantia OX=3673 GN=LOC111007936 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.5e-19
Identity = 67/128 (52.34%), Postives = 79/128 (61.72%), Query Frame = 0


Query: 1   MSFFSKFSSCWRS-AAVAPRVYLGDAVSEEV-----KAEQSVVRPRSSKSDSAAHWQPAL 60
           M FFS+F SC RS A VAPR+Y   A ++E        EQ V R R SKS  AAHW+PAL
Sbjct: 1   MKFFSRFGSCCRSPATVAPRLYQDTAPADEPITRARVEEQRVGRMRCSKSGPAAHWRPAL 60

Query: 61  DAIVEDGKGA---QSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMP 120
            AI+ED   A   Q +  KS E+K EKK SGR+ R + KS  Y+ GRDDYW NS  +AMP
Sbjct: 61  SAILEDNNAADAEQFQVNKSGERKLEKKASGRRARAIAKSQSYH-GRDDYWTNSTPVAMP 120

[Close]

BLAST of MELO3C018790 vs. ExPASy TrEMBL
Match: A0A6J1HXF5 (uncharacterized protein LOC111468353 OS=Cucurbita maxima OX=3661 GN=LOC111468353 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.9e-16
Identity = 63/120 (52.50%), Postives = 72/120 (60.00%), Query Frame = 0


Query: 1   MSFFSKFSSCWRSAAVAPRVYLGDAVSEEVKAEQSVVRPRSSKSDSAAHWQPALDAIVED 60
           M  FSK  S  R AAVA RVY           EQS+ R  SSK  SA+HWQPAL  I+ED
Sbjct: 1   MPLFSKLGSRLRRAAVARRVY----------QEQSLERVTSSKLGSASHWQPALPPILED 60

Query: 61  GKGAQSRWKKSREKKPEKKTSGRQGRFMTKSYGYYDGRDDYWRNSMAMAMPAFSPVPSMF 120
            KG +S  KKS EK   KKTS +Q R +TKSY    GRD YWR+S  +AMP F+  P MF
Sbjct: 61  SKGTRSPVKKSGEK---KKTSSQQRRSVTKSY----GRDGYWRSSTMVAMPFFASTPFMF 103

The following BLAST results are available for this feature:

BLAST of MELO3C018790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455392.1	6.3e-60	100.00	PREDICTED: uncharacterized protein LOC103495564 [Cucumis melo]	[more]
KAA0031624.1	1.9e-48	98.04	uncharacterized protein E6C27_scaffold139G003920 [Cucumis melo var. makuwa] >TYK...	[more]
XP_031745001.1	2.8e-39	74.79	uncharacterized protein LOC116405215 [Cucumis sativus]	[more]
XP_038888636.1	8.3e-36	73.33	uncharacterized protein LOC120078432 [Benincasa hispida]	[more]
XP_022136180.1	9.3e-19	52.34	uncharacterized protein LOC111007936 [Momordica charantia]	[more]

BLAST of MELO3C018790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C018790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C217	3.1e-60	100.00	uncharacterized protein LOC103495564 OS=Cucumis melo OX=3656 GN=LOC103495564 PE=...	[more]
A0A5D3C9U7	9.3e-49	98.04	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K279	7.4e-30	72.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044930 PE=4 SV=1	[more]
A0A6J1C360	4.5e-19	52.34	uncharacterized protein LOC111007936 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1HXF5	7.9e-16	52.50	uncharacterized protein LOC111468353 OS=Cucurbita maxima OX=3661 GN=LOC111468353...	[more]

BLAST of MELO3C018790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..84
None	No IPR available	PANTHER	PTHR35318	BNAA10G08410D PROTEIN	coord: 1..120
None	No IPR available	PANTHER	PTHR35318:SF10	SUBFAMILY NOT NAMED	coord: 1..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018790.1	MELO3C018790.1	mRNA