MELO3C018169.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C018169.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr04: 8937078 .. 8937251 (+)
RNA-Seq ExpressionMELO3C018169.jh1
SyntenyMELO3C018169.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGAGGCTATACCGACACAGAAATGGTCGTTGGTGAAGTCGTGAGAGACGTGTCATTAAAGGCACTCCCAACGTGCGAACGGGACGACGTCGACAAAGGGTTACTATTGACGCACTGTTTGCCAACATGGTCAATAAGTCGGCAGTGGGGAACTGCTGACACCTGGTAA

mRNA sequence

ATGGAGAGAGGCTATACCGACACAGAAATGGTCGTTGGTGAAGTCGTGAGAGACGTGTCATTAAAGGCACTCCCAACGTGCGAACGGGACGACGTCGACAAAGGGTTACTATTGACGCACTGTTTGCCAACATGGTCAATAAGTCGGCAGTGGGGAACTGCTGACACCTGGTAA

Coding sequence (CDS)

ATGGAGAGAGGCTATACCGACACAGAAATGGTCGTTGGTGAAGTCGTGAGAGACGTGTCATTAAAGGCACTCCCAACGTGCGAACGGGACGACGTCGACAAAGGGTTACTATTGACGCACTGTTTGCCAACATGGTCAATAAGTCGGCAGTGGGGAACTGCTGACACCTGGTAA

Protein sequence

MERGYTDTEMVVGEVVRDVSLKALPTCERDDVDKGLLLTHCLPTWSISRQWGTADTW
Homology
[Close]
BLAST of MELO3C018169.jh1 vs. NCBI nr
Match: KAA0045599.1 (hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 1.95e-08
Identity = 27/41 (65.85%), Postives = 27/41 (65.85%), Query Frame = 0 

Query: 15 VVRDVSLKALPTCERDDVDKGLLLTHCLPTWSISRQWGTAD 55
          VVRD S K L T E DDVDKGLLLTH    W   RQWGT D
Sbjct: 7  VVRDASTKTLQTHELDDVDKGLLLTHYSSIWLTRRQWGTTD 47

[Close]
BLAST of MELO3C018169.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TWH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001050 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 9.44e-09
Identity = 27/41 (65.85%), Postives = 27/41 (65.85%), Query Frame = 0 

Query: 15 VVRDVSLKALPTCERDDVDKGLLLTHCLPTWSISRQWGTAD 55
          VVRD S K L T E DDVDKGLLLTH    W   RQWGT D
Sbjct: 7  VVRDASTKTLQTHELDDVDKGLLLTHYSSIWLTRRQWGTTD 47

The following BLAST results are available for this feature:
BLAST of MELO3C018169.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0045599.11.95e-0865.85hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa][more]
BLAST of MELO3C018169.jh1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C018169.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TWH69.44e-0965.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C018169.jh1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018169.jh1.t1MELO3C018169.jh1.t1mRNA