MELO3C018002 (gene) Melon (DHL92) v4

Overview
NameMELO3C018002
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr07: 26174820 .. 26175107 (-)
RNA-Seq ExpressionMELO3C018002
SyntenyMELO3C018002
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCAAGAAGAATAGTACCGGCCTCTCTGTGGCGACCGTGGTGGTGATGATGGTGGTCTTTATGATTGCTACTCTAGCTGACTCCACCATAACGACTGAGAATGTGGCGTCTGGAGCCGTTGTGAACGGCGGTAGCCATGCTTTCCCAAGAAAAAATATCATGAAAAATGGTGATCAAAATGGAGTATGTTTGGTAAAAGGTAAGGCTTGCAAATCTCACAAAGACTGCCCATCCAATTGTGCTTGTTACACCGCTGGCCATTGTGGGGATTGGGTTCTCTAA

mRNA sequence

ATGGAGAGCAAGAAGAATAGTACCGGCCTCTCTGTGGCGACCGTGGTGGTGATGATGGTGGTCTTTATGATTGCTACTCTAGCTGACTCCACCATAACGACTGAGAATGTGGCGTCTGGAGCCGTTGTGAACGGCGGTAGCCATGCTTTCCCAAGAAAAAATATCATGAAAAATGGTGATCAAAATGGAGTATGTTTGGTAAAAGGTAAGGCTTGCAAATCTCACAAAGACTGCCCATCCAATTGTGCTTGTTACACCGCTGGCCATTGTGGGGATTGGGTTCTCTAA

Coding sequence (CDS)

ATGGAGAGCAAGAAGAATAGTACCGGCCTCTCTGTGGCGACCGTGGTGGTGATGATGGTGGTCTTTATGATTGCTACTCTAGCTGACTCCACCATAACGACTGAGAATGTGGCGTCTGGAGCCGTTGTGAACGGCGGTAGCCATGCTTTCCCAAGAAAAAATATCATGAAAAATGGTGATCAAAATGGAGTATGTTTGGTAAAAGGTAAGGCTTGCAAATCTCACAAAGACTGCCCATCCAATTGTGCTTGTTACACCGCTGGCCATTGTGGGGATTGGGTTCTCTAA

Protein sequence

MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGDQNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWVL
Homology
BLAST of MELO3C018002 vs. NCBI nr
Match: KAA0044338.1 (hypothetical protein E6C27_scaffold46G00630 [Cucumis melo var. makuwa] >TYK29467.1 hypothetical protein E5676_scaffold655G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0

Query: 1  MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGD 60
          MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGD
Sbjct: 1  MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGD 60

Query: 61 QNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWVL 96
          QNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWVL
Sbjct: 61 QNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWVL 95

BLAST of MELO3C018002 vs. NCBI nr
Match: KGN52763.1 (hypothetical protein Csa_014543 [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 5.2e-33
Identity = 78/96 (81.25%), Postives = 87/96 (90.62%), Query Frame = 0

Query: 1  MESKKNSTGLSVATVVVMMVVFMIATLADS-TITTENVASGAVVNGGSHAFPRKNIMKNG 60
          MESKK S   +VATVVV+MV FMIATLADS TI TENVA+G +V+GGSHAFPRKN++KNG
Sbjct: 1  MESKKKSIH-TVATVVVVMVAFMIATLADSATIATENVAAGVLVDGGSHAFPRKNVVKNG 60

Query: 61 DQNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWVL 96
           +NGVCLVKGKACKSHKDCPS+CACYTAGHCGDWVL
Sbjct: 61 -ENGVCLVKGKACKSHKDCPSDCACYTAGHCGDWVL 94

BLAST of MELO3C018002 vs. NCBI nr
Match: KGN52762.1 (hypothetical protein Csa_014579 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 2.2e-07
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query: 1  MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNG--GSHAFPRKNIMKN 60
          M+    + GL+VAT++VMM+  +IAT+ +S   TE +    +V     + +FPRK +M+N
Sbjct: 1  MKRMDKNIGLAVATMMVMML--LIATVVESASPTEKITMIELVTNHHAASSFPRK-MMRN 60

Query: 61 GDQNGVCLVKGKACK-SHKDC---PSNCACYTAGHCGDWV 95
          G  NGVC + G+ C   +  C      CACYTAGHCGD+V
Sbjct: 61 GKGNGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFV 97

BLAST of MELO3C018002 vs. NCBI nr
Match: KAG6576916.1 (hypothetical protein SDJN03_24490, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.1 bits (157), Expect = 3.8e-07
Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 0

Query: 1  MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGD 60
          ME K  +TGL    VV+M+ + M+ATLADS          AV  GG     R  I+   +
Sbjct: 1  MEMKMKNTGL---VVVMMVTMIMMATLADS----------AVAEGGGF---RSKILLKSE 60

Query: 61 QNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWV 95
           +  C     +C++H+DCP NCACYTAGHCGD+V
Sbjct: 61 GSSECPTY-LSCETHEDCPFNCACYTAGHCGDFV 77

BLAST of MELO3C018002 vs. NCBI nr
Match: KAA0044337.1 (hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa] >TYK29466.1 hypothetical protein E5676_scaffold655G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 0

Query: 1  MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGD 60
          M+S   + G + AT++VMM+  +IAT+ +S   TE +      +  + +FPRK +M+NG 
Sbjct: 1  MKSMNRNIG-AAATMMVMML--LIATVVESASPTEKMIKLVTDHHAAGSFPRK-MMRNGK 60

Query: 61 QNGVCLVKGKACKSHKDC---PSNCACYTAGHCGDWV 95
           NGVC + G  C     C     +CACYTAGHCGD+V
Sbjct: 61 GNGVCPITGWPCNPAYGCGPFSDSCACYTAGHCGDFV 93

BLAST of MELO3C018002 vs. ExPASy TrEMBL
Match: A0A5D3E009 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00630 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.8e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0

Query: 1  MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGD 60
          MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGD
Sbjct: 1  MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGD 60

Query: 61 QNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWVL 96
          QNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWVL
Sbjct: 61 QNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWVL 95

BLAST of MELO3C018002 vs. ExPASy TrEMBL
Match: A0A0A0KT53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.5e-33
Identity = 78/96 (81.25%), Postives = 87/96 (90.62%), Query Frame = 0

Query: 1  MESKKNSTGLSVATVVVMMVVFMIATLADS-TITTENVASGAVVNGGSHAFPRKNIMKNG 60
          MESKK S   +VATVVV+MV FMIATLADS TI TENVA+G +V+GGSHAFPRKN++KNG
Sbjct: 1  MESKKKSIH-TVATVVVVMVAFMIATLADSATIATENVAAGVLVDGGSHAFPRKNVVKNG 60

Query: 61 DQNGVCLVKGKACKSHKDCPSNCACYTAGHCGDWVL 96
           +NGVCLVKGKACKSHKDCPS+CACYTAGHCGDWVL
Sbjct: 61 -ENGVCLVKGKACKSHKDCPSDCACYTAGHCGDWVL 94

BLAST of MELO3C018002 vs. ExPASy TrEMBL
Match: A0A0A0KWE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-07
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query: 1  MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNG--GSHAFPRKNIMKN 60
          M+    + GL+VAT++VMM+  +IAT+ +S   TE +    +V     + +FPRK +M+N
Sbjct: 1  MKRMDKNIGLAVATMMVMML--LIATVVESASPTEKITMIELVTNHHAASSFPRK-MMRN 60

Query: 61 GDQNGVCLVKGKACK-SHKDC---PSNCACYTAGHCGDWV 95
          G  NGVC + G+ C   +  C      CACYTAGHCGD+V
Sbjct: 61 GKGNGVCPIIGRPCNPEYGGCGPFSDTCACYTAGHCGDFV 97

BLAST of MELO3C018002 vs. ExPASy TrEMBL
Match: A0A5D3E0N0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00620 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.9e-07
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 0

Query: 1  MESKKNSTGLSVATVVVMMVVFMIATLADSTITTENVASGAVVNGGSHAFPRKNIMKNGD 60
          M+S   + G + AT++VMM+  +IAT+ +S   TE +      +  + +FPRK +M+NG 
Sbjct: 1  MKSMNRNIG-AAATMMVMML--LIATVVESASPTEKMIKLVTDHHAAGSFPRK-MMRNGK 60

Query: 61 QNGVCLVKGKACKSHKDC---PSNCACYTAGHCGDWV 95
           NGVC + G  C     C     +CACYTAGHCGD+V
Sbjct: 61 GNGVCPITGWPCNPAYGCGPFSDSCACYTAGHCGDFV 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0044338.11.2e-45100.00hypothetical protein E6C27_scaffold46G00630 [Cucumis melo var. makuwa] >TYK29467... [more]
KGN52763.15.2e-3381.25hypothetical protein Csa_014543 [Cucumis sativus][more]
KGN52762.12.2e-0742.00hypothetical protein Csa_014579 [Cucumis sativus][more]
KAG6576916.13.8e-0743.62hypothetical protein SDJN03_24490, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0044337.11.4e-0641.24hypothetical protein E6C27_scaffold46G00620 [Cucumis melo var. makuwa] >TYK29466... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3E0095.8e-46100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KT532.5e-3381.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000830 PE=4 SV=1[more]
A0A0A0KWE41.1e-0742.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000820 PE=4 SV=1[more]
A0A5D3E0N06.9e-0741.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018002.1MELO3C018002.1mRNA