MELO3C017950.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAAACGAACTGTCTTTCCATTTCTCACACTCAAATTGCGACACACACAAAAACACCCACAACTCCCTTTTTTTCTTTCTAAACCCAAAACATTCATTTCAAATTAATCAACCATGCCTTTGCCTTCATCTTTCTCCACCCTCAGTACCCTCTCCACTCTCTTCAGGTTTGTTCAAATAATCTCTCTCTCCCCCTTTTCTTTCCACTTCCTTCTACTTAGTTAAATTATAAATTTAGAAAAATTAATTATTGATCATGTGTGATCCTACAGGCGGGGATACGCGACGGCGTCTGCAGAAGGAGTTGCGGCTAGAATTAGCAGCATTATGAAGAAGAAGGAAGAATCTTTAAGAATTGGTAGAGAGAAGATGGCAGTGTCGTGGGTTCCAGACCCCGTTACCGGTTATTATAGACCGGAGAACTGTGGGGCGGAGATGGACGCTGCCGATCTCCGGGCAATGCTCCTAAACCCAACAACAAAGTAATTTATTTAATCAATCTGTAAAGCTAATTAAGAACGTAGAATCGAGAGGTTTAGCGTGAGAGGAATTAGGATTGGATAATATTGTTGGGAGAATTACATGCCACAACACAAATTGGTGAGGTACACAAGCAGATAGGTAGTATTACTCCAGGATCAACCAAAATATTTTTCTTACCATCTTTGGAAGTGTCTGCTGTGCTGTTACAATTATTACTATTAGTTCAATAAAATTTTTACATATATAGTTGTGGATCCAAGATTTCATGTCACATAGAGCATTAATTTTGTATAAAGTTTATAATTTAGCTTATAAATTTTTATTTATATACCATAACA AAGAAAACGAACTGTCTTTCCATTTCTCACACTCAAATTGCGACACACACAAAAACACCCACAACTCCCTTTTTTTCTTTCTAAACCCAAAACATTCATTTCAAATTAATCAACCATGCCTTTGCCTTCATCTTTCTCCACCCTCAGTACCCTCTCCACTCTCTTCAGGCGGGGATACGCGACGGCGTCTGCAGAAGGAGTTGCGGCTAGAATTAGCAGCATTATGAAGAAGAAGGAAGAATCTTTAAGAATTGGTAGAGAGAAGATGGCAGTGTCGTGGGTTCCAGACCCCGTTACCGGTTATTATAGACCGGAGAACTGTGGGGCGGAGATGGACGCTGCCGATCTCCGGGCAATGCTCCTAAACCCAACAACAAAGTAATTTATTTAATCAATCTGTAAAGCTAATTAAGAACGTAGAATCGAGAGGTTTAGCGTGAGAGGAATTAGGATTGGATAATATTGTTGGGAGAATTACATGCCACAACACAAATTGGTGAGGTACACAAGCAGATAGGTAGTATTACTCCAGGATCAACCAAAATATTTTTCTTACCATCTTTGGAAGTGTCTGCTGTGCTGTTACAATTATTACTATTAGTTCAATAAAATTTTTACATATATAGTTGTGGATCCAAGATTTCATGTCACATAGAGCATTAATTTTGTATAAAGTTTATAATTTAGCTTATAAATTTTTATTTATATACCATAACA ATGCCTTTGCCTTCATCTTTCTCCACCCTCAGTACCCTCTCCACTCTCTTCAGGCGGGGATACGCGACGGCGTCTGCAGAAGGAGTTGCGGCTAGAATTAGCAGCATTATGAAGAAGAAGGAAGAATCTTTAAGAATTGGTAGAGAGAAGATGGCAGTGTCGTGGGTTCCAGACCCCGTTACCGGTTATTATAGACCGGAGAACTGTGGGGCGGAGATGGACGCTGCCGATCTCCGGGCAATGCTCCTAAACCCAACAACAAAGTAA MPLPSSFSTLSTLSTLFRRGYATASAEGVAARISSIMKKKEESLRIGREKMAVSWVPDPVTGYYRPENCGAEMDAADLRAMLLNPTTK Homology
BLAST of MELO3C017950.jh1 vs. NCBI nr
Match: KAA0044385.1 (protein SENESCENCE-ASSOCIATED protein 21 [Cucumis melo var. makuwa]) HSP 1 Score: 172 bits (436), Expect = 5.83e-54 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. NCBI nr
Match: XP_008454329.1 (PREDICTED: protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucumis melo] >TYK29513.1 SENESCENCE-ASSOCIATED GENE 21 protein [Cucumis melo var. makuwa]) HSP 1 Score: 160 bits (406), Expect = 2.02e-49 Identity = 84/88 (95.45%), Postives = 84/88 (95.45%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. NCBI nr
Match: XP_011652940.1 (late embryogenesis abundant protein Lea5-A [Cucumis sativus] >KGN52818.1 hypothetical protein Csa_015124 [Cucumis sativus]) HSP 1 Score: 142 bits (359), Expect = 2.99e-42 Identity = 74/86 (86.05%), Postives = 77/86 (89.53%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. NCBI nr
Match: XP_022949199.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata] >KAG6606956.1 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 86.3 bits (212), Expect = 7.73e-20 Identity = 46/74 (62.16%), Postives = 50/74 (67.57%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. NCBI nr
Match: XP_023525742.1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 82.8 bits (203), Expect = 2.12e-18 Identity = 47/80 (58.75%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. ExPASy Swiss-Prot
Match: Q93WF6 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 5.4e-11 Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. ExPASy Swiss-Prot
Match: P46521 (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum OX=3635 GN=LEA5-A PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 9.2e-11 Identity = 38/78 (48.72%), Postives = 45/78 (57.69%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. ExPASy Swiss-Prot
Match: P46522 (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5-D PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-10 Identity = 38/78 (48.72%), Postives = 45/78 (57.69%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. ExPASy Swiss-Prot
Match: Q39644 (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis OX=2711 GN=LEA5 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.8e-10 Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. ExPASy Swiss-Prot
Match: Q9SRX6 (Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.9e-08 Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TSN1 (Protein SENESCENCE-ASSOCIATED protein 21 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001130 PE=4 SV=1) HSP 1 Score: 172 bits (436), Expect = 2.82e-54 Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. ExPASy TrEMBL
Match: A0A5D3E0D0 (SENESCENCE-ASSOCIATED GENE 21 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001150 PE=4 SV=1) HSP 1 Score: 160 bits (406), Expect = 9.76e-50 Identity = 84/88 (95.45%), Postives = 84/88 (95.45%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BZK3 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103494763 PE=4 SV=1) HSP 1 Score: 160 bits (406), Expect = 9.76e-50 Identity = 84/88 (95.45%), Postives = 84/88 (95.45%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. ExPASy TrEMBL
Match: A0A0A0KTB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001850 PE=4 SV=1) HSP 1 Score: 142 bits (359), Expect = 1.45e-42 Identity = 74/86 (86.05%), Postives = 77/86 (89.53%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. ExPASy TrEMBL
Match: A0A6J1GC45 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452622 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.74e-20 Identity = 46/74 (62.16%), Postives = 50/74 (67.57%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. TAIR 10
Match: AT4G02380.1 (senescence-associated gene 21 ) HSP 1 Score: 68.2 bits (165), Expect = 3.8e-12 Identity = 42/89 (47.19%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. TAIR 10
Match: AT4G02380.2 (senescence-associated gene 21 ) HSP 1 Score: 63.5 bits (153), Expect = 9.5e-11 Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. TAIR 10
Match: AT1G02820.1 (Late embryogenesis abundant 3 (LEA3) family protein ) HSP 1 Score: 59.7 bits (143), Expect = 1.4e-09 Identity = 34/82 (41.46%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. TAIR 10
Match: AT4G15910.1 (drought-induced 21 ) HSP 1 Score: 54.3 bits (129), Expect = 5.8e-08 Identity = 36/91 (39.56%), Postives = 48/91 (52.75%), Query Frame = 0
BLAST of MELO3C017950.jh1 vs. TAIR 10
Match: AT3G53770.1 (late embryogenesis abundant 3 (LEA3) family protein ) HSP 1 Score: 48.1 bits (113), Expect = 4.1e-06 Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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