MELO3C017740.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C017740.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Protein of unknown function (DUF 3339)
Location	chr07: 25367477 .. 25368073 (+)
RNA-Seq Expression	MELO3C017740.jh1
Synteny	MELO3C017740.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAAAGAAGACAAAGCAAAGAAGAAAACAATGGCGGATTGGGGCCCAGTTTTCGTGGCTGTGGTTCTCTTCCTCCTTCTATCCCCCGGCCTTCTCTTCCAAATCCCCGGCCATCACAGCTTCATTCAGTTCGGCAACTTCCAAACCAGCGGCTCCTCCATTTTCATCCATTCCCTCATCTTCTTTGCCCTAATTTCCCTCTTCACCTTCGTCATTCAACTCCACATCTACATATGATCATCCCAAAATTATCGAACCTATTTCTAATTTCCAGGTATATACACTCGCGTTCCTTCTTTCGATTTCGCTTTTCGATTCTCTACTTTCTCTGTCTGTATAGTTTCCGTATGGATCTTTGTTTAGAGTGAAGCATATATATTATTTATGTTGTAATACATATATATTTTCAATTATAGGTTTTGAAATTGTTGAAGATGAATGAAGATGATCATCATCTCATCATCTCATCATCTCATCATAATCGTACGGAATTTAAGTAAAGATTAATTGGGATTTCTTAATCTGTGTTATTATGGAGTTGTTGTGTGATGATTTAATTAAAGAATATTGGAGTAATGGATGAGAAATTTTGGAA

mRNA sequence

GAAAAAAAGAAGACAAAGCAAAGAAGAAAACAATGGCGGATTGGGGCCCAGTTTTCGTGGCTGTGGTTCTCTTCCTCCTTCTATCCCCCGGCCTTCTCTTCCAAATCCCCGGCCATCACAGCTTCATTCAGTTCGGCAACTTCCAAACCAGCGGCTCCTCCATTTTCATCCATTCCCTCATCTTCTTTGCCCTAATTTCCCTCTTCACCTTCGTCATTCAACTCCACATCTACATATGATCATCCCAAAATTATCGAACCTATTTCTAATTTCCAGGTATATACACTCGCGTTCCTTCTTTCGATTTCGCTTTTCGATTCTCTACTTTCTCTGTCTGTATAGTTTCCGTATGGATCTTTGTTTAGAGTGAAGCATATATATTATTTATGTTGTAATACATATATATTTTCAATTATAGGTTTTGAAATTGTTGAAGATGAATGAAGATGATCATCATCTCATCATCTCATCATCTCATCATAATCGTACGGAATTTAAGTAAAGATTAATTGGGATTTCTTAATCTGTGTTATTATGGAGTTGTTGTGTGATGATTTAATTAAAGAATATTGGAGTAATGGATGAGAAATTTTGGAA

Coding sequence (CDS)

ATGGCGGATTGGGGCCCAGTTTTCGTGGCTGTGGTTCTCTTCCTCCTTCTATCCCCCGGCCTTCTCTTCCAAATCCCCGGCCATCACAGCTTCATTCAGTTCGGCAACTTCCAAACCAGCGGCTCCTCCATTTTCATCCATTCCCTCATCTTCTTTGCCCTAATTTCCCTCTTCACCTTCGTCATTCAACTCCACATCTACATATGA

Protein sequence

MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTFVIQLHIYI

Homology

[Close]

BLAST of MELO3C017740.jh1 vs. NCBI nr
Match: XP_008454011.1 (PREDICTED: uncharacterized protein LOC103494560 [Cucumis melo])

HSP 1 Score: 128 bits (321), Expect = 5.02e-37
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60

Query: 61 VIQLHIYI 68
          VIQLHIYI
Sbjct: 61 VIQLHIYI 68

[Close]

BLAST of MELO3C017740.jh1 vs. NCBI nr
Match: XP_038900916.1 (uncharacterized protein LOC120087962 [Benincasa hispida])

HSP 1 Score: 124 bits (311), Expect = 1.69e-35
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQ+PGHH F+QFGNFQTSG+SIFIHSLIFFALISLFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFVQFGNFQTSGASIFIHSLIFFALISLFTF 60

Query: 61 VIQLHIYI 68
          VIQLHIYI
Sbjct: 61 VIQLHIYI 68

[Close]

BLAST of MELO3C017740.jh1 vs. NCBI nr
Match: XP_004152115.1 (uncharacterized protein LOC101215007 [Cucumis sativus])

HSP 1 Score: 124 bits (310), Expect = 2.40e-35
Identity = 65/68 (95.59%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQIPGH+SF+QFGNFQTSG+SIFIHSLIFFALISLFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHNSFVQFGNFQTSGASIFIHSLIFFALISLFTF 60

Query: 61 VIQLHIYI 68
          VIQLHIYI
Sbjct: 61 VIQLHIYI 68

[Close]

BLAST of MELO3C017740.jh1 vs. NCBI nr
Match: XP_022932694.1 (uncharacterized protein LOC111439163 [Cucurbita moschata] >XP_022972135.1 uncharacterized protein LOC111470767 [Cucurbita maxima] >XP_023539087.1 uncharacterized protein LOC111799839 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 121 bits (303), Expect = 2.81e-34
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQ+PGHH FIQFGNFQTSG+SIFIHSLIFFALI LFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTF 60

Query: 61 VIQLHIY 67
          V+QLHIY
Sbjct: 61 VLQLHIY 67

[Close]

BLAST of MELO3C017740.jh1 vs. NCBI nr
Match: XP_022145182.1 (uncharacterized protein LOC111014687 [Momordica charantia])

HSP 1 Score: 118 bits (296), Expect = 3.29e-33
Identity = 59/68 (86.76%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQ+PGHH F++FGNF TSG+SIFIHSLIFFAL+ LFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTF 60

Query: 61 VIQLHIYI 68
          V+QLHIYI
Sbjct: 61 VVQLHIYI 68

[Close]

BLAST of MELO3C017740.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BX44 (uncharacterized protein LOC103494560 OS=Cucumis melo OX=3656 GN=LOC103494560 PE=4 SV=1)

HSP 1 Score: 128 bits (321), Expect = 2.43e-37
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60

Query: 61 VIQLHIYI 68
          VIQLHIYI
Sbjct: 61 VIQLHIYI 68

[Close]

BLAST of MELO3C017740.jh1 vs. ExPASy TrEMBL
Match: A0A6J1I7P7 (uncharacterized protein LOC111470767 OS=Cucurbita maxima OX=3661 GN=LOC111470767 PE=4 SV=1)

HSP 1 Score: 121 bits (303), Expect = 1.36e-34
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQ+PGHH FIQFGNFQTSG+SIFIHSLIFFALI LFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTF 60

Query: 61 VIQLHIY 67
          V+QLHIY
Sbjct: 61 VLQLHIY 67

[Close]

BLAST of MELO3C017740.jh1 vs. ExPASy TrEMBL
Match: A0A6J1EXQ9 (uncharacterized protein LOC111439163 OS=Cucurbita moschata OX=3662 GN=LOC111439163 PE=4 SV=1)

HSP 1 Score: 121 bits (303), Expect = 1.36e-34
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQ+PGHH FIQFGNFQTSG+SIFIHSLIFFALI LFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTF 60

Query: 61 VIQLHIY 67
          V+QLHIY
Sbjct: 61 VLQLHIY 67

[Close]

BLAST of MELO3C017740.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CVS1 (uncharacterized protein LOC111014687 OS=Momordica charantia OX=3673 GN=LOC111014687 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 1.59e-33
Identity = 59/68 (86.76%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQ+PGHH F++FGNF TSG+SIFIHSLIFFAL+ LFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTF 60

Query: 61 VIQLHIYI 68
          V+QLHIYI
Sbjct: 61 VVQLHIYI 68

[Close]

BLAST of MELO3C017740.jh1 vs. ExPASy TrEMBL
Match: A0A6A1UN09 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004505 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.91e-26
Identity = 46/67 (68.66%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          M+DWGPVFVAVVLF+LL+PGLLFQ+PGHH +++FGNFQTSG+SI IHSL++F LI +F  
Sbjct: 1  MSDWGPVFVAVVLFVLLTPGLLFQVPGHHGYVEFGNFQTSGASILIHSLLYFGLICIFFL 60

Query: 61 VIQLHIY 67
           I++H+Y
Sbjct: 61 AIKVHLY 67

[Close]

BLAST of MELO3C017740.jh1 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 92.4 bits (228), Expect = 1.5e-19
Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADWGPV VAV+LF+LL+PGLLFQIP     ++FGN QTSG+SI +H++IFF LI++FT 
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 VIQLHIY 68
           I+LHIY
Sbjct: 61 AIRLHIY 67

[Close]

BLAST of MELO3C017740.jh1 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 90.1 bits (222), Expect = 7.3e-19
Identity = 42/67 (62.69%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADWGPV +AV+LF++LSPGLLFQIP     ++FGN QTSG+SI +H++IFF LI++FT 
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 VIQLHIY 68
           I +HIY
Sbjct: 61 AINVHIY 67

[Close]

BLAST of MELO3C017740.jh1 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 87.8 bits (216), Expect = 3.6e-18
Identity = 37/68 (54.41%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          M+DWGPV V V+LF++L+PGLLFQ+PG   +++FGNFQTS  S+ +HSL++F+L+ +F  
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 VIQLHIYI 69
           +++HIYI
Sbjct: 61 ALKIHIYI 68

[Close]

BLAST of MELO3C017740.jh1 vs. TAIR 10
Match: AT3G27030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 2.6e-16
Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          M DWGPVFVAV LF+LL+PGLL Q+PG    ++FG FQTSG S+ +H+LI+F L+ +   
Sbjct: 1  MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 61 VIQLHI 67
           +Q+HI
Sbjct: 61 ALQIHI 66

[Close]

BLAST of MELO3C017740.jh1 vs. TAIR 10
Match: AT5G40970.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 80.1 bits (196), Expect = 7.6e-16
Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60
          MADW PV V VVLF++LSPGLLF +PGHH  +QFG  +T+G +I +H+LIFFA  ++   
Sbjct: 1  MADWAPVLVGVVLFVILSPGLLFSLPGHHHTLQFGGMKTNGKAIAVHTLIFFAAYTILIL 60

Query: 61 VIQLHI 67
           + LHI
Sbjct: 61 AVNLHI 66

The following BLAST results are available for this feature:

BLAST of MELO3C017740.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454011.1	5.02e-37	100.00	PREDICTED: uncharacterized protein LOC103494560 [Cucumis melo]	[more]
XP_038900916.1	1.69e-35	94.12	uncharacterized protein LOC120087962 [Benincasa hispida]	[more]
XP_004152115.1	2.40e-35	95.59	uncharacterized protein LOC101215007 [Cucumis sativus]	[more]
XP_022932694.1	2.81e-34	92.54	uncharacterized protein LOC111439163 [Cucurbita moschata] >XP_022972135.1 unchar...	[more]
XP_022145182.1	3.29e-33	86.76	uncharacterized protein LOC111014687 [Momordica charantia]	[more]

BLAST of MELO3C017740.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C017740.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BX44	2.43e-37	100.00	uncharacterized protein LOC103494560 OS=Cucumis melo OX=3656 GN=LOC103494560 PE=...	[more]
A0A6J1I7P7	1.36e-34	92.54	uncharacterized protein LOC111470767 OS=Cucurbita maxima OX=3661 GN=LOC111470767...	[more]
A0A6J1EXQ9	1.36e-34	92.54	uncharacterized protein LOC111439163 OS=Cucurbita moschata OX=3662 GN=LOC1114391...	[more]
A0A6J1CVS1	1.59e-33	86.76	uncharacterized protein LOC111014687 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6A1UN09	4.91e-26	68.66	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G004505 PE=4 SV=1	[more]

BLAST of MELO3C017740.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48660.1	1.5e-19	65.67	Protein of unknown function (DUF 3339)	[more]
AT5G63500.1	7.3e-19	62.69	Protein of unknown function (DUF 3339)	[more]
AT5G08391.1	3.6e-18	54.41	Protein of unknown function (DUF 3339)	[more]
AT3G27030.1	2.6e-16	56.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G40970.1	7.6e-16	56.06	Protein of unknown function (DUF 3339)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 1..67 e-value: 5.7E-31 score: 106.5
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	OS05G0103400 PROTEIN	coord: 1..68
None	No IPR available	PANTHER	PTHR33128:SF55	PROTEIN, PUTATIVE (DUF 3339)-RELATED	coord: 1..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017740.jh1.t1	MELO3C017740.jh1.t1	mRNA