MELO3C017418 (gene) Melon (DHL92) v4

Overview


Name	MELO3C017418
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr02: 23388833 .. 23389075 (-)
RNA-Seq Expression	MELO3C017418
Synteny	MELO3C017418

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTGAATAAGAGTCACGAAGAACACAACCAACCCCTTCAACAACAACAAAAATCCAAATCCAACGACGACAGCGGCCCGGAAAATGAAGCCATGGATCCCACGACGAAGCTGTTGATTCGACAAGCAATTGTAACCGGCGACGACAACAACAATGGCGGCGGATCGGAAACTCGCAGCGCCTCGGAGGTTTTAGCCTTCACTAGATCAGTCGACAAAACCGACTCTTCTCTCGAATGA

mRNA sequence

ATGGATGTGAATAAGAGTCACGAAGAACACAACCAACCCCTTCAACAACAACAAAAATCCAAATCCAACGACGACAGCGGCCCGGAAAATGAAGCCATGGATCCCACGACGAAGCTGTTGATTCGACAAGCAATTGTAACCGGCGACGACAACAACAATGGCGGCGGATCGGAAACTCGCAGCGCCTCGGAGGTTTTAGCCTTCACTAGATCAGTCGACAAAACCGACTCTTCTCTCGAATGA

Coding sequence (CDS)

ATGGATGTGAATAAGAGTCACGAAGAACACAACCAACCCCTTCAACAACAACAAAAATCCAAATCCAACGACGACAGCGGCCCGGAAAATGAAGCCATGGATCCCACGACGAAGCTGTTGATTCGACAAGCAATTGTAACCGGCGACGACAACAACAATGGCGGCGGATCGGAAACTCGCAGCGCCTCGGAGGTTTTAGCCTTCACTAGATCAGTCGACAAAACCGACTCTTCTCTCGAATGA

Protein sequence

MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETRSASEVLAFTRSVDKTDSSLE

Homology

[Close]

BLAST of MELO3C017418 vs. NCBI nr
Match: KAA0058205.1 (hypothetical protein E6C27_scaffold274G005260 [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 8.9e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR 60
          MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR
Sbjct: 5  MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR 64

Query: 61 SASEVLAFTRSVDKTDSSLE 81
          SASEVLAFTRSVDKTDSSLE
Sbjct: 65 SASEVLAFTRSVDKTDSSLE 84

[Close]

BLAST of MELO3C017418 vs. NCBI nr
Match: TYK28569.1 (hypothetical protein E5676_scaffold629G002160 [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 8.9e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR 60
          MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR
Sbjct: 1  MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR 60

Query: 61 SASEVLAFTRSVDKTDSSLE 81
          SASEVLAFTRSVDKTDSSLE
Sbjct: 61 SASEVLAFTRSVDKTDSSLE 80

[Close]

BLAST of MELO3C017418 vs. NCBI nr
Match: KGN65494.1 (hypothetical protein Csa_019946 [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17
Identity = 58/82 (70.73%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 1  MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVT--GDDNNNGGGSE 60
          MDVNK+H++ N     QQKSKSN+D+G ENEAMDPTTKLLIRQAIV   G D++NGG +E
Sbjct: 1  MDVNKNHQQQN-----QQKSKSNNDTGRENEAMDPTTKLLIRQAIVNGGGGDDDNGGRAE 60

Query: 61 TRSASEVLAFTRSVDKTDSSLE 81
           R  SEVLAFTRSV+KTDSSLE
Sbjct: 61 IRGPSEVLAFTRSVNKTDSSLE 77

[Close]

BLAST of MELO3C017418 vs. ExPASy TrEMBL
Match: A0A5D3DYW2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002160 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.3e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR 60
          MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR
Sbjct: 1  MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR 60

Query: 61 SASEVLAFTRSVDKTDSSLE 81
          SASEVLAFTRSVDKTDSSLE
Sbjct: 61 SASEVLAFTRSVDKTDSSLE 80

[Close]

BLAST of MELO3C017418 vs. ExPASy TrEMBL
Match: A0A5A7UX55 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005260 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.3e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR 60
          MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR
Sbjct: 5  MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVTGDDNNNGGGSETR 64

Query: 61 SASEVLAFTRSVDKTDSSLE 81
          SASEVLAFTRSVDKTDSSLE
Sbjct: 65 SASEVLAFTRSVDKTDSSLE 84

[Close]

BLAST of MELO3C017418 vs. ExPASy TrEMBL
Match: A0A0A0LWZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G426950 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.4e-18
Identity = 58/82 (70.73%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 1  MDVNKSHEEHNQPLQQQQKSKSNDDSGPENEAMDPTTKLLIRQAIVT--GDDNNNGGGSE 60
          MDVNK+H++ N     QQKSKSN+D+G ENEAMDPTTKLLIRQAIV   G D++NGG +E
Sbjct: 1  MDVNKNHQQQN-----QQKSKSNNDTGRENEAMDPTTKLLIRQAIVNGGGGDDDNGGRAE 60

Query: 61 TRSASEVLAFTRSVDKTDSSLE 81
           R  SEVLAFTRSV+KTDSSLE
Sbjct: 61 IRGPSEVLAFTRSVNKTDSSLE 77

The following BLAST results are available for this feature:

BLAST of MELO3C017418 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058205.1	8.9e-34	100.00	hypothetical protein E6C27_scaffold274G005260 [Cucumis melo var. makuwa]	[more]
TYK28569.1	8.9e-34	100.00	hypothetical protein E5676_scaffold629G002160 [Cucumis melo var. makuwa]	[more]
KGN65494.1	1.5e-17	70.73	hypothetical protein Csa_019946 [Cucumis sativus]	[more]

BLAST of MELO3C017418 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C017418 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DYW2	4.3e-34	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UX55	4.3e-34	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LWZ4	7.4e-18	70.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G426950 PE=4 SV=1	[more]

BLAST of MELO3C017418 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017418.1	MELO3C017418.1	mRNA