MELO3C017164.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C017164.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	BHLH transcription factor
Location	chr02: 23446762 .. 23447630 (+)
RNA-Seq Expression	MELO3C017164.jh1
Synteny	MELO3C017164.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGCAGTCTTCAAAAAGAAAACCCCATTAACCTCTTCTTCTACTTGAGTAATTTACACACTTTTTGTCTCATATCCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAATCAAAAACACCCCATTATCATTCTTAGTGCAATCGATCACTTCTTTAGTTACTAATTATATACTTGATACATTATTACGCATATATTATAGCTTTACAACGTCGACGACAAGAAGAAGATATGTCAAGCAGAAGATCTAGATCTAGACAGTCAGGTAGTTCAAGATCAATCACTGATGACCAAATTAATGATCTTGTTTCTAAGTTGCAACAACTTCTTCCCGAGATTCGTCACAGGCAATCCGATAAGGTAAGACAACAACAATAATACACACACACTAAATGATCATCATCATCATCGAATACTACTACTCTTTTTCTAAATCTCTTAACCATGTTTAAATAATATATTTATAGGTTTCGGCAGCGAAAGTGTTGCAGGAGACGTGTAACTACATACGAAACCTACACAGAGAAGTGGATGATTTGAGCGAGAGACTTTCGGAGTTGTTGGCAACATCTGATACTGCTCAAGCTGCCATTATTAGGAGTTTACTTATGCAATAGAGAGAGAGATGATCGATGATGATGATCAAAAGATAGCTAATTAATTTTGAGTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTGCTATGTTTGGTTTCTGACATAGTTGCTGTTTTCAATGCCCTCTCAGAGACACTTCCATCATAATGTTGTTTTGTAAAAGATCTTCTCAATCCCAAGTCCTTCTTATTATTACTATTCATCAATAAAATTTCTTCTTT

mRNA sequence

TTTGCAGTCTTCAAAAAGAAAACCCCATTAACCTCTTCTTCTACTTGAGTAATTTACACACTTTTTGTCTCATATCCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAAATCAAAAACACCCCATTATCATTCTTAGTGCAATCGATCACTTCTTTAGTTACTAATTATATACTTGATACATTATTACGCATATATTATAGCTTTACAACGTCGACGACAAGAAGAAGATATGTCAAGCAGAAGATCTAGATCTAGACAGTCAGGTAGTTCAAGATCAATCACTGATGACCAAATTAATGATCTTGTTTCTAAGTTGCAACAACTTCTTCCCGAGATTCGTCACAGGCAATCCGATAAGGTTTCGGCAGCGAAAGTGTTGCAGGAGACGTGTAACTACATACGAAACCTACACAGAGAAGTGGATGATTTGAGCGAGAGACTTTCGGAGTTGTTGGCAACATCTGATACTGCTCAAGCTGCCATTATTAGGAGTTTACTTATGCAATAGAGAGAGAGATGATCGATGATGATGATCAAAAGATAGCTAATTAATTTTGAGTTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTGCTATGTTTGGTTTCTGACATAGTTGCTGTTTTCAATGCCCTCTCAGAGACACTTCCATCATAATGTTGTTTTGTAAAAGATCTTCTCAATCCCAAGTCCTTCTTATTATTACTATTCATCAATAAAATTTCTTCTTT

Coding sequence (CDS)

ATGTCAAGCAGAAGATCTAGATCTAGACAGTCAGGTAGTTCAAGATCAATCACTGATGACCAAATTAATGATCTTGTTTCTAAGTTGCAACAACTTCTTCCCGAGATTCGTCACAGGCAATCCGATAAGGTTTCGGCAGCGAAAGTGTTGCAGGAGACGTGTAACTACATACGAAACCTACACAGAGAAGTGGATGATTTGAGCGAGAGACTTTCGGAGTTGTTGGCAACATCTGATACTGCTCAAGCTGCCATTATTAGGAGTTTACTTATGCAATAG

Protein sequence

MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ

Homology

[Close]

BLAST of MELO3C017164.jh1 vs. NCBI nr
Match: XP_008453188.1 (PREDICTED: transcription factor PRE3-like [Cucumis melo])

HSP 1 Score: 167 bits (422), Expect = 1.06e-51
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL
Sbjct: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92

[Close]

BLAST of MELO3C017164.jh1 vs. NCBI nr
Match: XP_004138158.1 (transcription factor PRE3-like [Cucumis sativus] >KAE8652414.1 hypothetical protein Csa_013458 [Cucumis sativus])

HSP 1 Score: 166 bits (419), Expect = 3.05e-51
Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSA+KVLQETCNYIRNL
Sbjct: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSASKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92

[Close]

BLAST of MELO3C017164.jh1 vs. NCBI nr
Match: XP_038880650.1 (transcription factor PRE3-like [Benincasa hispida])

HSP 1 Score: 159 bits (401), Expect = 1.65e-48
Identity = 90/92 (97.83%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRH QSDKVSAAKVLQETCNYIRNL
Sbjct: 1  MSSRRSRSRQSGSSR-ITDDQINDLVSKLQQLLPEIRHTQSDKVSAAKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 91

[Close]

BLAST of MELO3C017164.jh1 vs. NCBI nr
Match: XP_022135424.1 (transcription factor ILI6-like [Momordica charantia])

HSP 1 Score: 157 bits (397), Expect = 6.73e-48
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRHRQSDKVSAA VLQETCNYIR+L
Sbjct: 1  MSSRRSRSRQSGSSR-ITDDQINDLVSKLQQLLPEIRHRQSDKVSAANVLQETCNYIRSL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 91

[Close]

BLAST of MELO3C017164.jh1 vs. NCBI nr
Match: XP_022987208.1 (transcription factor PRE3-like [Cucurbita maxima])

HSP 1 Score: 154 bits (390), Expect = 7.86e-47
Identity = 86/92 (93.48%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRH QSDKVSAAK+LQETCNYI+NL
Sbjct: 1  MSSRRSRSRQSGSSR-ITDDQINDLVSKLQQLLPEIRHSQSDKVSAAKILQETCNYIKNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Sbjct: 61 HREVDDLSERLSELLASSDTAQAAIIRNLLMQ 91

[Close]

BLAST of MELO3C017164.jh1 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.4e-30
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIR-HRQSDKVSAAKVLQETCNYIRN 60
          MS RRSRSRQS  +  I++DQINDL+ KLQQLLPE+R  R+SDKVSAA+VLQ+TCNYIRN
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLMQ 93
          LHREVDDLSERLSELLA SDTAQAA+IRSLL Q
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of MELO3C017164.jh1 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-29
Identity = 76/93 (81.72%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 1  MSSRR-SRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRN 60
          MSSRR SRSRQSGSSR I+DDQI+DLVSKLQ L+PE+R R+SDKVSA+KVLQETCNYIRN
Sbjct: 1  MSSRRSSRSRQSGSSR-ISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSD--TAQAAIIRSLL 91
          LHREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 LHREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of MELO3C017164.jh1 vs. ExPASy Swiss-Prot
Match: B8APB5 (Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.5e-29
Identity = 75/93 (80.65%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITD+QI+DLVSKLQ LLPE R R +D+V +++VLQETCNYIR+L
Sbjct: 1  MSSRRSRSRQSGSSR-ITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSL 60

Query: 61 HREVDDLSERLSELLATSD--TAQAAIIRSLLM 92
          H+EVDDLSERLSELLATSD  +AQAAIIRSLLM
Sbjct: 61 HQEVDDLSERLSELLATSDMSSAQAAIIRSLLM 92

[Close]

BLAST of MELO3C017164.jh1 vs. ExPASy Swiss-Prot
Match: Q0DUR2 (Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.5e-29
Identity = 75/93 (80.65%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITD+QI+DLVSKLQ LLPE R R +D+V +++VLQETCNYIR+L
Sbjct: 1  MSSRRSRSRQSGSSR-ITDEQISDLVSKLQDLLPEARLRSNDRVPSSRVLQETCNYIRSL 60

Query: 61 HREVDDLSERLSELLATSD--TAQAAIIRSLLM 92
          H+EVDDLSERLSELLATSD  +AQAAIIRSLLM
Sbjct: 61 HQEVDDLSERLSELLATSDMSSAQAAIIRSLLM 92

[Close]

BLAST of MELO3C017164.jh1 vs. ExPASy Swiss-Prot
Match: F4JCN9 (Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.4e-25
Identity = 66/93 (70.97%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRN 60
          MSSR+SRSRQ+G+S  ITD+QINDLV +L +LLPE+  +R+S KVSA++VLQETC+YIRN
Sbjct: 1  MSSRKSRSRQTGAS-MITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLMQ 93
          L +EVDDLSERLS+LL ++D+AQAA+IRSLLMQ
Sbjct: 61 LSKEVDDLSERLSQLLESTDSAQAALIRSLLMQ 92

[Close]

BLAST of MELO3C017164.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BWE2 (transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103493979 PE=4 SV=1)

HSP 1 Score: 167 bits (422), Expect = 5.15e-52
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL
Sbjct: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92

[Close]

BLAST of MELO3C017164.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C1E4 (transcription factor ILI6-like OS=Momordica charantia OX=3673 GN=LOC111007381 PE=4 SV=1)

HSP 1 Score: 157 bits (397), Expect = 3.26e-48
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRHRQSDKVSAA VLQETCNYIR+L
Sbjct: 1  MSSRRSRSRQSGSSR-ITDDQINDLVSKLQQLLPEIRHRQSDKVSAANVLQETCNYIRSL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLATSDTAQAAIIRSLLMQ
Sbjct: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 91

[Close]

BLAST of MELO3C017164.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JIT1 (transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111484830 PE=4 SV=1)

HSP 1 Score: 154 bits (390), Expect = 3.81e-47
Identity = 86/92 (93.48%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRH QSDKVSAAK+LQETCNYI+NL
Sbjct: 1  MSSRRSRSRQSGSSR-ITDDQINDLVSKLQQLLPEIRHSQSDKVSAAKILQETCNYIKNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Sbjct: 61 HREVDDLSERLSELLASSDTAQAAIIRNLLMQ 91

[Close]

BLAST of MELO3C017164.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IDH8 (transcription factor ILI6-like OS=Cucurbita maxima OX=3661 GN=LOC111471611 PE=4 SV=1)

HSP 1 Score: 153 bits (387), Expect = 1.09e-46
Identity = 87/92 (94.57%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSGSSR ITDDQINDLVSKLQQLLPEIRHRQSDK SAA VLQETCNYIR+L
Sbjct: 1  MSSRRSRSRQSGSSR-ITDDQINDLVSKLQQLLPEIRHRQSDKSSAAHVLQETCNYIRSL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERL+ELLATSDTAQAAIIRSLLMQ
Sbjct: 61 HREVDDLSERLAELLATSDTAQAAIIRSLLMQ 91

[Close]

BLAST of MELO3C017164.jh1 vs. ExPASy TrEMBL
Match: A0A6J1E6W2 (transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111429966 PE=4 SV=1)

HSP 1 Score: 153 bits (386), Expect = 1.55e-46
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRNL 60
          MSSRRSRSRQSG SR ITDDQINDLVSKLQQLLPEIRH QSDKVSAAK+LQETCNYI+NL
Sbjct: 1  MSSRRSRSRQSGGSR-ITDDQINDLVSKLQQLLPEIRHSQSDKVSAAKILQETCNYIKNL 60

Query: 61 HREVDDLSERLSELLATSDTAQAAIIRSLLMQ 92
          HREVDDLSERLSELLA+SDTAQAAIIR+LLMQ
Sbjct: 61 HREVDDLSERLSELLASSDTAQAAIIRNLLMQ 91

[Close]

BLAST of MELO3C017164.jh1 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 )

HSP 1 Score: 133.3 bits (334), Expect = 1.0e-31
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEIR-HRQSDKVSAAKVLQETCNYIRN 60
          MS RRSRSRQS  +  I++DQINDL+ KLQQLLPE+R  R+SDKVSAA+VLQ+TCNYIRN
Sbjct: 1  MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLMQ 93
          LHREVDDLSERLSELLA SDTAQAA+IRSLL Q
Sbjct: 61 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ 93

[Close]

BLAST of MELO3C017164.jh1 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 129.0 bits (323), Expect = 1.9e-30
Identity = 76/93 (81.72%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 1  MSSRR-SRSRQSGSSRSITDDQINDLVSKLQQLLPEIRHRQSDKVSAAKVLQETCNYIRN 60
          MSSRR SRSRQSGSSR I+DDQI+DLVSKLQ L+PE+R R+SDKVSA+KVLQETCNYIRN
Sbjct: 1  MSSRRSSRSRQSGSSR-ISDDQISDLVSKLQHLIPELRRRRSDKVSASKVLQETCNYIRN 60

Query: 61 LHREVDDLSERLSELLATSD--TAQAAIIRSLL 91
          LHREVDDLS+RLSELLA++D  +A+AAIIRSLL
Sbjct: 61 LHREVDDLSDRLSELLASTDDNSAEAAIIRSLL 92

[Close]

BLAST of MELO3C017164.jh1 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 )

HSP 1 Score: 115.9 bits (289), Expect = 1.7e-26
Identity = 66/93 (70.97%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRN 60
          MSSR+SRSRQ+G+S  ITD+QINDLV +L +LLPE+  +R+S KVSA++VLQETC+YIRN
Sbjct: 1  MSSRKSRSRQTGAS-MITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRN 60

Query: 61 LHREVDDLSERLSELLATSDTAQAAIIRSLLMQ 93
          L +EVDDLSERLS+LL ++D+AQAA+IRSLLMQ
Sbjct: 61 LSKEVDDLSERLSQLLESTDSAQAALIRSLLMQ 92

[Close]

BLAST of MELO3C017164.jh1 vs. TAIR 10
Match: AT5G39860.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 104.0 bits (258), Expect = 6.6e-23
Identity = 63/94 (67.02%), Postives = 80/94 (85.11%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRN 60
          MS+R  RSRQS S+  I+D+Q+ DLVSKL+Q+LPEI + R+SDK SA+KVLQETCNYIRN
Sbjct: 1  MSNR--RSRQSSSAPRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRN 60

Query: 61 LHREVDDLSERLSELLAT--SDTAQAAIIRSLLM 92
          L+REVD+LSERLS+LL +   D+ +AA+IRSLLM
Sbjct: 61 LNREVDNLSERLSQLLESVDEDSPEAAVIRSLLM 92

[Close]

BLAST of MELO3C017164.jh1 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-22
Identity = 62/94 (65.96%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 1  MSSRRSRSRQSGSSRSITDDQINDLVSKLQQLLPEI-RHRQSDKVSAAKVLQETCNYIRN 60
          MS+R  RSRQ+ ++  I+DDQ+ DLVSKL+Q LPEI   R+SDKVSA+KVLQETCNYIR 
Sbjct: 1  MSNR--RSRQTSNASRISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRK 60

Query: 61 LHREVDDLSERLSELL--ATSDTAQAAIIRSLLM 92
          LHREVD+LS+RLS+LL     D+ +AA+IRSLLM
Sbjct: 61 LHREVDNLSDRLSQLLDSVDEDSPEAAVIRSLLM 92

The following BLAST results are available for this feature:

BLAST of MELO3C017164.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453188.1	1.06e-51	100.00	PREDICTED: transcription factor PRE3-like [Cucumis melo]	[more]
XP_004138158.1	3.05e-51	98.91	transcription factor PRE3-like [Cucumis sativus] >KAE8652414.1 hypothetical prot...	[more]
XP_038880650.1	1.65e-48	97.83	transcription factor PRE3-like [Benincasa hispida]	[more]
XP_022135424.1	6.73e-48	96.74	transcription factor ILI6-like [Momordica charantia]	[more]
XP_022987208.1	7.86e-47	93.48	transcription factor PRE3-like [Cucurbita maxima]	[more]

BLAST of MELO3C017164.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA64	1.4e-30	79.57	Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1	[more]
Q8GW32	2.7e-29	81.72	Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1	[more]
B8APB5	3.5e-29	80.65	Transcription factor ILI6 OS=Oryza sativa subsp. indica OX=39946 GN=ILI6 PE=3 SV...	[more]
Q0DUR2	3.5e-29	80.65	Transcription factor ILI6 OS=Oryza sativa subsp. japonica OX=39947 GN=ILI6 PE=1 ...	[more]
F4JCN9	2.4e-25	70.97	Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1	[more]

BLAST of MELO3C017164.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BWE2	5.15e-52	100.00	transcription factor PRE3-like OS=Cucumis melo OX=3656 GN=LOC103493979 PE=4 SV=1	[more]
A0A6J1C1E4	3.26e-48	96.74	transcription factor ILI6-like OS=Momordica charantia OX=3673 GN=LOC111007381 PE...	[more]
A0A6J1JIT1	3.81e-47	93.48	transcription factor PRE3-like OS=Cucurbita maxima OX=3661 GN=LOC111484830 PE=4 ...	[more]
A0A6J1IDH8	1.09e-46	94.57	transcription factor ILI6-like OS=Cucurbita maxima OX=3661 GN=LOC111471611 PE=4 ...	[more]
A0A6J1E6W2	1.55e-46	92.39	transcription factor PRE3-like OS=Cucurbita moschata OX=3662 GN=LOC111429966 PE=...	[more]

BLAST of MELO3C017164.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74500.1	1.0e-31	79.57	activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1	[more]
AT1G26945.1	1.9e-30	81.72	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G47710.1	1.7e-26	70.97	BANQUO 3	[more]
AT5G39860.1	6.6e-23	67.02	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT3G28857.1	1.1e-22	65.96	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR46446:SF3	TRANSCRIPTION FACTOR PRE3	coord: 1..91
None	No IPR available	CDD	cd11442	bHLH_AtPRE_like	coord: 17..77 e-value: 4.45975E-22 score: 79.2695
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 20..61 e-value: 3.6E-7 score: 30.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 6..60 score: 9.864142
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 19..88 e-value: 1.8E-10 score: 42.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 20..78
IPR044293	Transcription factor PRE	PANTHER	PTHR46446	TRANSCRIPTION FACTOR PRE	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017164.jh1.t1	MELO3C017164.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0040008	regulation of growth
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0046983	protein dimerization activity