MELO3C017105 (gene) Melon (DHL92) v4

Overview


Name	MELO3C017105
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	NHL domain protein
Location	chr02: 25826182 .. 25827122 (-)
RNA-Seq Expression	MELO3C017105
Synteny	MELO3C017105

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATCCGATAATGGCGTTTACCGATGTAGATCAAGAAGAGTCTCCTTGTTGTGAGGCTGATAAATCCAATTCTTTGTTGCCGACAGCCCGGTGCGGTTGTTTTCGGCTATCGTGCTTTGGATCTCGCCGTGTAGCCACTGTCGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAGCGAGGGACGGTGGTGGGCGAGAGGGGTTAAGGTTATTTTGAAGCTCCGTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTTATTCGTCGATTTAATCGGAATCGTAGTGGTGGTTGTGGTGGTGGTGGTGGTGGTGGAAGTGGGGTTAGGGCTGGGAAATTTCAATATGATCCTTTGAGCTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATGGATGATTTCAATGGTTATCGAAACTTCTCTGCTCGTTATGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACTAAGGATGTTTCTGCCGTCGCGTAAAGGTGCGCTGTGTTTAATAAAATACGCCGTGTTTAGTGCTGTTATTGTCCACACATTGGGCTGGCTGACATCACCGCCGCCATCGCCGTCGCCGCCACCTCCTCCGTTAGATTTTTCTTGTTTTCTTTTTTAATTCTCAAAAGTAAATACATGTTTGAGTTAATTTTGGACTTTCCTTTCTCTTTCTTCCTAATGGTATTGGTGGCACATCAGGATCAATGTACTATACCATAAGAGTGGGTTTTTTTTTCTTAAAAAAGAATATTCTTTTATATTAAATTATATCCTAATAGTGTATAATAATATTGATTAGAGGACTTGCTTTGTTTTATATGGGGGTTAAATAAAAAGGTCATATAATGTTTGTATATGTATTGTCCTTGTATGAATTGAAAAATAGTATCAACA

mRNA sequence

GAAATCCGATAATGGCGTTTACCGATGTAGATCAAGAAGAGTCTCCTTGTTGTGAGGCTGATAAATCCAATTCTTTGTTGCCGACAGCCCGGTGCGGTTGTTTTCGGCTATCGTGCTTTGGATCTCGCCGTGTAGCCACTGTCGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAGCGAGGGACGGTGGTGGGCGAGAGGGGTTAAGGTTATTTTGAAGCTCCGTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTTATTCGTCGATTTAATCGGAATCGTAGTGGTGGTTGTGGTGGTGGTGGTGGTGGTGGAAGTGGGGTTAGGGCTGGGAAATTTCAATATGATCCTTTGAGCTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATGGATGATTTCAATGGTTATCGAAACTTCTCTGCTCGTTATGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACTAAGGATGTTTCTGCCGTCGCGTAAAGGTGCGCTGTGTTTAATAAAATACGCCGTGTTTAGTGCTGTTATTGTCCACACATTGGGCTGGCTGACATCACCGCCGCCATCGCCGTCGCCGCCACCTCCTCCGTTAGATTTTTCTTGTTTTCTTTTTTAATTCTCAAAAGTAAATACATGTTTGAGTTAATTTTGGACTTTCCTTTCTCTTTCTTCCTAATGGTATTGGTGGCACATCAGGATCAATGTACTATACCATAAGAGTGGGTTTTTTTTTCTTAAAAAAGAATATTCTTTTATATTAAATTATATCCTAATAGTGTATAATAATATTGATTAGAGGACTTGCTTTGTTTTATATGGGGGTTAAATAAAAAGGTCATATAATGTTTGTATATGTATTGTCCTTGTATGAATTGAAAAATAGTATCAACA

Coding sequence (CDS)

ATGGCGTTTACCGATGTAGATCAAGAAGAGTCTCCTTGTTGTGAGGCTGATAAATCCAATTCTTTGTTGCCGACAGCCCGGTGCGGTTGTTTTCGGCTATCGTGCTTTGGATCTCGCCGTGTAGCCACTGTCGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAGCGAGGGACGGTGGTGGGCGAGAGGGGTTAAGGTTATTTTGAAGCTCCGTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTTATTCGTCGATTTAATCGGAATCGTAGTGGTGGTTGTGGTGGTGGTGGTGGTGGTGGAAGTGGGGTTAGGGCTGGGAAATTTCAATATGATCCTTTGAGCTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATGGATGATTTCAATGGTTATCGAAACTTCTCTGCTCGTTATGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACTAAGGATGTTTCTGCCGTCGCGTAA

Protein sequence

MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA

Homology

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BLAST of MELO3C017105 vs. NCBI nr
Match: XP_008453108.1 (PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo] >TYJ98568.1 putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 363.6 bits (932), Expect = 9.4e-97
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120
           GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 174
           LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

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BLAST of MELO3C017105 vs. NCBI nr
Match: KAA0057881.1 (putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 358.6 bits (919), Expect = 3.0e-95
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGC--GGGGGGGSGVRAGKFQY 120
           GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGC  GGGGGGGSGVRAGKFQY
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 174
           DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 175

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BLAST of MELO3C017105 vs. NCBI nr
Match: XP_011657987.1 (uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical protein Csa_013668 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 6.5e-90
Identity = 164/176 (93.18%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60

Query: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG---GGGGGSGVRAGKFQ 120
           GRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG   GGGGGSGVRAGKFQ
Sbjct: 61  GRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQ 120

Query: 121 YDPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 174
           YDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 YDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 175

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BLAST of MELO3C017105 vs. NCBI nr
Match: XP_038878924.1 (uncharacterized protein LOC120071012 [Benincasa hispida])

HSP 1 Score: 317.4 bits (812), Expect = 7.7e-83
Identity = 158/175 (90.29%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV +EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWER+RASQVHSE
Sbjct: 1   MAFTDV-EEESP-CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERLRASQVHSE 60

Query: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120
           GRWWARGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS      GGGG GVRAGKFQYDP
Sbjct: 61  GRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS------GGGGGGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 174
           LSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGT  KDVS+VA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTIIKDVSSVA 167

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BLAST of MELO3C017105 vs. NCBI nr
Match: KAG7023141.1 (hypothetical protein SDJN02_14166, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.0 bits (746), Expect = 3.5e-75
Identity = 143/169 (84.62%), Postives = 148/169 (87.57%), Query Frame = 0


Query: 7   DQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGRWWAR 66
           D EE P CEA  SNSLLPT RCGCFRLSC  SRR   VGPSWWERIRASQVHSEGRWWAR
Sbjct: 5   DAEEPPPCEAANSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRASQVHSEGRWWAR 64

Query: 67  GVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDPLSYAMN 126
           GV+VILK+REWSEIVAGPRWKTFIRRFNRNR+G  GGGGGGG+  R GKF YDPLSYAMN
Sbjct: 65  GVRVILKIREWSEIVAGPRWKTFIRRFNRNRNG--GGGGGGGATGRPGKFHYDPLSYAMN 124

Query: 127 FDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 174
           FDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Sbjct: 125 FDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 171

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BLAST of MELO3C017105 vs. ExPASy TrEMBL
Match: A0A5D3BK38 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001870 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 4.5e-97
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120
           GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 174
           LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of MELO3C017105 vs. ExPASy TrEMBL
Match: A0A1S3BVG0 (uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 4.5e-97
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120
           GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDP 120

Query: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 174
           LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 LSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 173

[Close]

BLAST of MELO3C017105 vs. ExPASy TrEMBL
Match: A0A5A7UWM1 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001790 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.5e-95
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE
Sbjct: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60

Query: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGC--GGGGGGGSGVRAGKFQY 120
           GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGC  GGGGGGGSGVRAGKFQY
Sbjct: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 174
           DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 175

[Close]

BLAST of MELO3C017105 vs. ExPASy TrEMBL
Match: A0A0A0LUB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.1e-90
Identity = 164/176 (93.18%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MAFTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSE 60
           MAFTDV +EESPCC+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+E
Sbjct: 1   MAFTDV-EEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNE 60

Query: 61  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG---GGGGGSGVRAGKFQ 120
           GRWW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRSGGCGG   GGGGGSGVRAGKFQ
Sbjct: 61  GRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQ 120

Query: 121 YDPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA 174
           YDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Sbjct: 121 YDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKNVSAVA 175

[Close]

BLAST of MELO3C017105 vs. ExPASy TrEMBL
Match: A0A6J1JH52 (uncharacterized protein LOC111485666 OS=Cucurbita maxima OX=3661 GN=LOC111485666 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.3e-75
Identity = 142/169 (84.02%), Postives = 147/169 (86.98%), Query Frame = 0


Query: 7   DQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGRWWAR 66
           D EE P  EAD SNSLLPT RCGCFRLSC  SRR   VGPSWWERIR SQVHSEGRWWAR
Sbjct: 5   DAEEPPPYEADNSNSLLPTTRCGCFRLSCLESRRAVAVGPSWWERIRGSQVHSEGRWWAR 64

Query: 67  GVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDPLSYAMN 126
           GV+VILK+REWSEIVAGPRWKTFIRRFNRNR+G  GGGGGG +  R GKFQYDPLSYAMN
Sbjct: 65  GVRVILKIREWSEIVAGPRWKTFIRRFNRNRNG--GGGGGGAAAGRPGKFQYDPLSYAMN 124

Query: 127 FDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA 174
           FDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Sbjct: 125 FDEGSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGGTTGKDISTVA 171

[Close]

BLAST of MELO3C017105 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-27
Identity = 70/175 (40.00%), Postives = 98/175 (56.00%), Query Frame = 0


Query: 6   VDQEESPCCEADKSNSL---LPTARCGCFRLSCFGSRRVATVGPS-WWERI-RASQVHSE 65
           +  +  P  E D ++ +   L   R  CF + C  S + +T G S WW+RI    ++  +
Sbjct: 1   MSHQSPPIAEVDATDDMHEALFAKRGCCFLMPCLASSQPSTRGGSVWWQRITTVDKLEPD 60

Query: 66  GRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNR------------NRSGGCGGGGGGG 125
            RWW RG +   ++REWSE+VAGPRWKT+IRRF R            N SGGCGGG    
Sbjct: 61  ERWWIRGWR---RMREWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPN 120

Query: 126 SGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKT 164
                GKF+YD LSY++NFD+G+ Q G  DD+      YR++S R+A+   P+ T
Sbjct: 121 RSSDQGKFRYDQLSYSLNFDDGN-QTGHFDDEFP----YRDYSMRFAAPSLPVST 167

[Close]

BLAST of MELO3C017105 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 107.8 bits (268), Expect = 8.6e-24
Identity = 66/161 (40.99%), Postives = 92/161 (57.14%), Query Frame = 0


Query: 9   EESPCCEADKSNSL---LPTARCGCFRLSCFGSRRVA-TVGPSWWERIR-ASQVHSEGRW 68
           E  P  E D ++ +   +   R  CF L C GS + +   G  WW+RIR   ++  + RW
Sbjct: 587 ESFPISEMDATDEMHEAMFAKRGCCFILPCLGSSQPSGPNGSVWWQRIRTVDKLEPDERW 646

Query: 69  WARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGG-GGGGSGVRAGKFQYDPLS 128
           W  G    +K+REWSEIVAGP+WKTFIRRF RN    C GG  GG +      F+YD  S
Sbjct: 647 WVSG---WMKMREWSEIVAGPKWKTFIRRFGRNHC--CNGGIDGGCNRPEHVSFRYDSWS 706

Query: 129 YAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKT 164
           Y++NFD+G +Q G  +D+      YR++S R+A+   P+ T
Sbjct: 707 YSLNFDDG-KQTGHFEDEFP----YRDYSMRFAAPSLPVST 737

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BLAST of MELO3C017105 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-23
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 43  TVGPSWWERIRASQVHSEGRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCG 102
           TV  SWW+RI  +  H E RWW   V+  LK+REWSEIVAGPRWKTFIRRFNR+   G  
Sbjct: 19  TVKSSWWQRIHRNN-HQEPRWW---VRAFLKIREWSEIVAGPRWKTFIRRFNRDPRRGQD 78

Query: 103 GGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIP 159
                     + KF+YDP+SY ++F++  +     DDD     G R+FS RYAS+P
Sbjct: 79  WDD-------SDKFRYDPVSYTLSFEDEDKD----DDDEAGVGGVRSFSMRYASVP 119

[Close]

BLAST of MELO3C017105 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 102.1 bits (253), Expect = 4.7e-22
Identity = 67/142 (47.18%), Postives = 81/142 (57.04%), Query Frame = 0


Query: 27  RCGCFRLSCFGSRRVATVGPSWWERIRA--SQVHS-----EGRWWARGVKVILKLREWSE 86
           RC CF  S   SR    VG S W RIR      HS     E RWW   ++  LK+REWSE
Sbjct: 19  RCCCFP-SFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWW---IRASLKIREWSE 78

Query: 87  IVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDD 146
           IVAGPRWKTFIRRFNR+   G            + KFQYDPLSY++NFD+        DD
Sbjct: 79  IVAGPRWKTFIRRFNRDPRRGRDWDA-------SEKFQYDPLSYSLNFDD--------DD 138

Query: 147 DMDDF---NGYRNFSARYASIP 159
           + D++    G R+FS R+AS+P
Sbjct: 139 EEDEYVGLGGLRSFSTRFASVP 141

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BLAST of MELO3C017105 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 2.4e-05
Identity = 27/75 (36.00%), Postives = 37/75 (49.33%), Query Frame = 0


Query: 56  QVHSEGRWWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGK 115
           Q    G W   G + +  L+E SE +AGP+WK FIR F+  R              R   
Sbjct: 51  QEERRGNW---GSEKLKGLKEISEKIAGPKWKNFIRSFSSGRK----------KMRRDVD 110

Query: 116 FQYDPLSYAMNFDEG 131
           F YD  +Y++NFD+G
Sbjct: 111 FTYDLKNYSLNFDDG 112

The following BLAST results are available for this feature:

BLAST of MELO3C017105 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453108.1	9.4e-97	100.00	PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo] >TYJ98568.1 putat...	[more]
KAA0057881.1	3.0e-95	98.86	putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa]	[more]
XP_011657987.1	6.5e-90	93.18	uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical ...	[more]
XP_038878924.1	7.7e-83	90.29	uncharacterized protein LOC120071012 [Benincasa hispida]	[more]
KAG7023141.1	3.5e-75	84.62	hypothetical protein SDJN02_14166, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MELO3C017105 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C017105 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BK38	4.5e-97	100.00	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]
A0A1S3BVG0	4.5e-97	100.00	uncharacterized protein LOC103493921 OS=Cucumis melo OX=3656 GN=LOC103493921 PE=...	[more]
A0A5A7UWM1	1.5e-95	98.86	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]
A0A0A0LUB2	3.1e-90	93.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1	[more]
A0A6J1JH52	8.3e-75	84.02	uncharacterized protein LOC111485666 OS=Cucurbita maxima OX=3661 GN=LOC111485666...	[more]

BLAST of MELO3C017105 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01430.1	2.2e-27	40.00	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT5G14890.1	8.6e-24	40.99	NHL domain-containing protein	[more]
AT3G48020.1	3.3e-23	49.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G62865.1	4.7e-22	47.18	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25240.1	2.4e-05	36.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 4..170
None	No IPR available	PANTHER	PTHR47076:SF9	BNAA06G16930D PROTEIN	coord: 4..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C017105.1	MELO3C017105.1	mRNA