MELO3C017014.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C017014.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTranscription activator-like protein
Locationchr07: 472186 .. 472661 (-)
RNA-Seq ExpressionMELO3C017014.jh1
SyntenyMELO3C017014.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCCTAAAATGGAAAACAAGCAGAGGATAGAGATGGAGAGGGAGCAGCAGAGGCGAGAACAATCAAAGAAGATAGAGCAAGAACCGCCGTACTACATTTCTCCGATGCAGCCATTGACGGAAAGTGCTTACGGCGGAGGAATGTACGGCACGGAGGAGGGAGATCAGGAAAGCCTGCAGATCAAGAAAGTACCTGCGAGCCAGACGCAGAGCGCCGATGGACCAGTCGAAGCGGAAATGAAGCTGAAGCATCCGCCTCCGCCGTCATCAGGCGACAGAGACATCGATATCACCGGGCAATCGTATTTCCAGTAGCGTGAAATTAAAAGCTCGTGAAGGCTGCCCCGATTGCCTATTGTGAATGTGTTTAATAATGGCGATCGAGAGGTAGTTTGTTCCATGTAATTTGGTTCGTTTTCTTTACTCGATTGATGCGTTTGCTTTTTTTATGGATCTATGAATGATTGCATCAGTTA

mRNA sequence

TACCCTAAAATGGAAAACAAGCAGAGGATAGAGATGGAGAGGGAGCAGCAGAGGCGAGAACAATCAAAGAAGATAGAGCAAGAACCGCCGTACTACATTTCTCCGATGCAGCCATTGACGGAAAGTGCTTACGGCGGAGGAATGTACGGCACGGAGGAGGGAGATCAGGAAAGCCTGCAGATCAAGAAAGTACCTGCGAGCCAGACGCAGAGCGCCGATGGACCAGTCGAAGCGGAAATGAAGCTGAAGCATCCGCCTCCGCCGTCATCAGGCGACAGAGACATCGATATCACCGGGCAATCGTATTTCCAGTAGCGTGAAATTAAAAGCTCGTGAAGGCTGCCCCGATTGCCTATTGTGAATGTGTTTAATAATGGCGATCGAGAGGTAGTTTGTTCCATGTAATTTGGTTCGTTTTCTTTACTCGATTGATGCGTTTGCTTTTTTTATGGATCTATGAATGATTGCATCAGTTA

Coding sequence (CDS)

ATGGAAAACAAGCAGAGGATAGAGATGGAGAGGGAGCAGCAGAGGCGAGAACAATCAAAGAAGATAGAGCAAGAACCGCCGTACTACATTTCTCCGATGCAGCCATTGACGGAAAGTGCTTACGGCGGAGGAATGTACGGCACGGAGGAGGGAGATCAGGAAAGCCTGCAGATCAAGAAAGTACCTGCGAGCCAGACGCAGAGCGCCGATGGACCAGTCGAAGCGGAAATGAAGCTGAAGCATCCGCCTCCGCCGTCATCAGGCGACAGAGACATCGATATCACCGGGCAATCGTATTTCCAGTAG

Protein sequence

MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQIKKVPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ
Homology
BLAST of MELO3C017014.jh1 vs. NCBI nr
Match: XP_008452943.1 (PREDICTED: uncharacterized protein LOC103493802 [Cucumis melo])

HSP 1 Score: 196 bits (497), Expect = 7.37e-63
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQIKK 60
           MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQ+KK
Sbjct: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQMKK 60

Query: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ
Sbjct: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101

BLAST of MELO3C017014.jh1 vs. NCBI nr
Match: XP_011654420.1 (uncharacterized protein LOC105435391 [Cucumis sativus])

HSP 1 Score: 176 bits (446), Expect = 4.59e-55
Identity = 92/102 (90.20%), Postives = 97/102 (95.10%), Query Frame = 0

Query: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEE-GDQESLQIK 60
           MENKQ+IEMEREQQRRE+SKKIEQEPPYYIS MQPLTE AYGGGMYGT++ GDQ+SLQIK
Sbjct: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIK 60

Query: 61  KVPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           KVPAS TQSADGPV AEMKLKHPPPPSSGDRDIDITGQSYFQ
Sbjct: 61  KVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSYFQ 102

BLAST of MELO3C017014.jh1 vs. NCBI nr
Match: KAG6591229.1 (hypothetical protein SDJN03_13575, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024115.1 hypothetical protein SDJN02_12928, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160 bits (404), Expect = 1.06e-48
Identity = 83/101 (82.18%), Postives = 91/101 (90.10%), Query Frame = 0

Query: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQIKK 60
           ME  Q++EMEREQQRRE++KK+EQEPP+YISPMQPLTESAYGGGMYGTEEG Q+SLQ K 
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGTEEGQQQSLQKK- 60

Query: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
            PAS TQSADGPVE+ MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  -PASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

BLAST of MELO3C017014.jh1 vs. NCBI nr
Match: XP_022936823.1 (uncharacterized protein LOC111443294 [Cucurbita moschata] >XP_022976625.1 uncharacterized protein LOC111476971 [Cucurbita maxima] >XP_023535795.1 uncharacterized protein LOC111797123 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158 bits (399), Expect = 6.15e-48
Identity = 82/101 (81.19%), Postives = 90/101 (89.11%), Query Frame = 0

Query: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQIKK 60
           ME  Q++EMEREQQRRE++KK+EQEPP+YISPMQPLTESAYGGGMYG EEG Q+SLQ K 
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGAEEGQQQSLQKK- 60

Query: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
            PAS TQSADGPVE+ MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  -PASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

BLAST of MELO3C017014.jh1 vs. NCBI nr
Match: XP_038899828.1 (uncharacterized protein LOC120087055 [Benincasa hispida])

HSP 1 Score: 156 bits (395), Expect = 2.51e-47
Identity = 81/101 (80.20%), Postives = 92/101 (91.09%), Query Frame = 0

Query: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQIKK 60
           ME+ Q++EMEREQQRRE+SKK+EQ+PP+YISPM+PLTESAYGGGMYG EEG++ SLQ K 
Sbjct: 1   MESNQKMEMEREQQRREESKKMEQQPPHYISPMKPLTESAYGGGMYGGEEGEERSLQKK- 60

Query: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
            PAS+TQSADGPVE EMK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  -PASETQSADGPVEREMKPKHAPPPSSGDRDIDITGQSYFQ 99

BLAST of MELO3C017014.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BV26 (uncharacterized protein LOC103493802 OS=Cucumis melo OX=3656 GN=LOC103493802 PE=4 SV=1)

HSP 1 Score: 196 bits (497), Expect = 3.57e-63
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0

Query: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQIKK 60
           MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQ+KK
Sbjct: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQMKK 60

Query: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ
Sbjct: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101

BLAST of MELO3C017014.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L393 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G658490 PE=4 SV=1)

HSP 1 Score: 176 bits (446), Expect = 2.22e-55
Identity = 92/102 (90.20%), Postives = 97/102 (95.10%), Query Frame = 0

Query: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEE-GDQESLQIK 60
           MENKQ+IEMEREQQRRE+SKKIEQEPPYYIS MQPLTE AYGGGMYGT++ GDQ+SLQIK
Sbjct: 1   MENKQKIEMEREQQRREESKKIEQEPPYYISRMQPLTECAYGGGMYGTDDKGDQDSLQIK 60

Query: 61  KVPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
           KVPAS TQSADGPV AEMKLKHPPPPSSGDRDIDITGQSYFQ
Sbjct: 61  KVPASTTQSADGPVVAEMKLKHPPPPSSGDRDIDITGQSYFQ 102

BLAST of MELO3C017014.jh1 vs. ExPASy TrEMBL
Match: A0A6J1IJZ9 (uncharacterized protein LOC111476971 OS=Cucurbita maxima OX=3661 GN=LOC111476971 PE=4 SV=1)

HSP 1 Score: 158 bits (399), Expect = 2.98e-48
Identity = 82/101 (81.19%), Postives = 90/101 (89.11%), Query Frame = 0

Query: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQIKK 60
           ME  Q++EMEREQQRRE++KK+EQEPP+YISPMQPLTESAYGGGMYG EEG Q+SLQ K 
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGAEEGQQQSLQKK- 60

Query: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
            PAS TQSADGPVE+ MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  -PASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

BLAST of MELO3C017014.jh1 vs. ExPASy TrEMBL
Match: A0A6J1FEB2 (uncharacterized protein LOC111443294 OS=Cucurbita moschata OX=3662 GN=LOC111443294 PE=4 SV=1)

HSP 1 Score: 158 bits (399), Expect = 2.98e-48
Identity = 82/101 (81.19%), Postives = 90/101 (89.11%), Query Frame = 0

Query: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQIKK 60
           ME  Q++EMEREQQRRE++KK+EQEPP+YISPMQPLTESAYGGGMYG EEG Q+SLQ K 
Sbjct: 1   METNQKVEMEREQQRREETKKLEQEPPHYISPMQPLTESAYGGGMYGAEEGQQQSLQKK- 60

Query: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
            PAS TQSADGPVE+ MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  -PASDTQSADGPVESGMKPKHAPPPSSGDRDIDITGQSYFQ 99

BLAST of MELO3C017014.jh1 vs. ExPASy TrEMBL
Match: A0A6J1BT98 (uncharacterized protein LOC111005558 OS=Momordica charantia OX=3673 GN=LOC111005558 PE=4 SV=1)

HSP 1 Score: 150 bits (379), Expect = 3.34e-45
Identity = 80/101 (79.21%), Postives = 87/101 (86.14%), Query Frame = 0

Query: 1   MENKQRIEMEREQQRREQSKKIEQEPPYYISPMQPLTESAYGGGMYGTEEGDQESLQIKK 60
           ME  Q+IEMERE+QRRE++KK+EQ+PP  ISPMQPLTESAYGGGMYG EEG Q+ L  KK
Sbjct: 1   MERNQKIEMEREEQRREETKKMEQQPPQNISPMQPLTESAYGGGMYGAEEGQQQLL--KK 60

Query: 61  VPASQTQSADGPVEAEMKLKHPPPPSSGDRDIDITGQSYFQ 101
            PAS TQSADGPVEA MK KH PPPSSGDRDIDITGQSYFQ
Sbjct: 61  KPASDTQSADGPVEAGMKPKHAPPPSSGDRDIDITGQSYFQ 99

BLAST of MELO3C017014.jh1 vs. TAIR 10
Match: AT5G42290.1 (transcription activator-related )

HSP 1 Score: 79.3 bits (194), Expect = 1.9e-15
Identity = 53/110 (48.18%), Postives = 67/110 (60.91%), Query Frame = 0

Query: 7   IEMEREQQRREQSKKIE--QEPPYYISPMQPLTESAYGGGMYGTEEG------DQESLQI 66
           +E E +Q+  E   K E  Q  P YIS MQP+T  AYGGG+YG ++       ++E+  I
Sbjct: 1   MEKEPKQEPEEGRDKYEPHQHQPPYISQMQPVTHEAYGGGLYGQDDEKETTNLEKEAKNI 60

Query: 67  KK------VPASQTQSADGPVEAE-MKLKHPPPPSSGDRDIDITGQSYFQ 102
           +K       PAS TQSADGP E + +  KH  P SSGDRD+DITGQSY Q
Sbjct: 61  EKEPQQQRPPASDTQSADGPDEVKTLTPKHKQPASSGDRDVDITGQSYIQ 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008452943.17.37e-6399.01PREDICTED: uncharacterized protein LOC103493802 [Cucumis melo][more]
XP_011654420.14.59e-5590.20uncharacterized protein LOC105435391 [Cucumis sativus][more]
KAG6591229.11.06e-4882.18hypothetical protein SDJN03_13575, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022936823.16.15e-4881.19uncharacterized protein LOC111443294 [Cucurbita moschata] >XP_022976625.1 unchar... [more]
XP_038899828.12.51e-4780.20uncharacterized protein LOC120087055 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BV263.57e-6399.01uncharacterized protein LOC103493802 OS=Cucumis melo OX=3656 GN=LOC103493802 PE=... [more]
A0A0A0L3932.22e-5590.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G658490 PE=4 SV=1[more]
A0A6J1IJZ92.98e-4881.19uncharacterized protein LOC111476971 OS=Cucurbita maxima OX=3661 GN=LOC111476971... [more]
A0A6J1FEB22.98e-4881.19uncharacterized protein LOC111443294 OS=Cucurbita moschata OX=3662 GN=LOC1114432... [more]
A0A6J1BT983.34e-4579.21uncharacterized protein LOC111005558 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
Match NameE-valueIdentityDescription
AT5G42290.11.9e-1548.18transcription activator-related [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017014.jh1.t1MELO3C017014.jh1.t1mRNA