MELO3C016901.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C016901.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	RWP-RK domain-containing protein
Location	chr07: 1399341 .. 1400302 (+)
RNA-Seq Expression	MELO3C016901.jh1
Synteny	MELO3C016901.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGGGAGGAGAGGAATCCGATGGAGAAGAAGAGAGAGAAGAACAAATCCAAATGGAACAACAATCACATCCGCCGCCGGAATTTGGGGGTCGCCGTCGAGTTCCCCAAACACCTCTAGCAAGACAGGTCTGTAGAAACGAAATAGAAAAATACATCACATCATGGTTGCTCATAGAAACAGAGTAAAACAGAGTGACTCTGTTTTTCCTTTTCTTTTTTTCAAATCTCAATCGGAACAGAGACAAAGAGCTGGAAGAATGACGGTGAACGATTTGAAAGAATATCTTCACCTTCCGATCAGCGAGGCAGCGAAGAAGATGAACCTTTGTCTCACAGTCGTCAAGAAAATCTGCCGCCGGAGTGGGCTCCGCCGCTGGCCTTACAGGAAGGTCCTTTTTCTTTATCTTCTTCTATTTTTCTCCCCCAAATGTTTTCGTTATTTACGGGATTTTCATAGAAAATTGGAATGGGTTATTAGGTGAAGAGTTATCAGAGGAAAATGGGAGCTTTAGGGACGAGATTGAGATCGAGAGATGCAGAGACGAGGGCCAGAGCTGAGGCTGAAATGGAAAGGCTTCGCCAAGAATTGGCTCAGTTTTGTGCCGGAATTGTACCTGATTAAAACGCCGACGTTTTTGTTCATTTGTGAGATTATTTTTTATTTTTTGAAAGGTCTATTTGAGGAATTTTTAGGTGACGAACTCAAATAGAAAAAGAAATAACTAACATTAAGAATTTTGGTATCATGTATTTCTTTCCTGAGACATTATAATTTATTGAAATTTAGTTAGTAAGAGCCTGTCAATTATATCTATTCTTTTAGGAAGGAGAAAGGGACGTTAGTCTTTGGGTAGTTTTTCATGTAAATCCTTCTTTATTTTGTTGTTGGATCTCTCGTCCATTAGGACATTAGAAAGTCTCTGTTTTGTATGTGGTTGGAAGGACTAAAATTCTAAAGAAA

mRNA sequence

AGAGGGAGGAGAGGAATCCGATGGAGAAGAAGAGAGAGAAGAACAAATCCAAATGGAACAACAATCACATCCGCCGCCGGAATTTGGGGGTCGCCGTCGAGTTCCCCAAACACCTCTAGCAAGACAGGTCTGTAGAAACGAAATAGAAAAATACATCACATCATGGTTGCTCATAGAAACAGAGTAAAACAGAGTGACTCTGTTTTTCCTTTTCTTTTTTTCAAATCTCAATCGGAACAGAGACAAAGAGCTGGAAGAATGACGGTGAACGATTTGAAAGAATATCTTCACCTTCCGATCAGCGAGGCAGCGAAGAAGATGAACCTTTGTCTCACAGTCGTCAAGAAAATCTGCCGCCGGAGTGGGCTCCGCCGCTGGCCTTACAGGAAGGTGAAGAGTTATCAGAGGAAAATGGGAGCTTTAGGGACGAGATTGAGATCGAGAGATGCAGAGACGAGGGCCAGAGCTGAGGCTGAAATGGAAAGGCTTCGCCAAGAATTGGCTCAGTTTTGTGCCGGAATTGTACCTGATTAAAACGCCGACGTTTTTGTTCATTTGTGAGATTATTTTTTATTTTTTGAAAGGTCTATTTGAGGAATTTTTAGGTGACGAACTCAAATAGAAAAAGAAATAACTAACATTAAGAATTTTGGTATCATGTATTTCTTTCCTGAGACATTATAATTTATTGAAATTTAGTTAGTAAGAGCCTGTCAATTATATCTATTCTTTTAGGAAGGAGAAAGGGACGTTAGTCTTTGGGTAGTTTTTCATGTAAATCCTTCTTTATTTTGTTGTTGGATCTCTCGTCCATTAGGACATTAGAAAGTCTCTGTTTTGTATGTGGTTGGAAGGACTAAAATTCTAAAGAAA

Coding sequence (CDS)

ATGGTTGCTCATAGAAACAGAGTAAAACAGAGTGACTCTGTTTTTCCTTTTCTTTTTTTCAAATCTCAATCGGAACAGAGACAAAGAGCTGGAAGAATGACGGTGAACGATTTGAAAGAATATCTTCACCTTCCGATCAGCGAGGCAGCGAAGAAGATGAACCTTTGTCTCACAGTCGTCAAGAAAATCTGCCGCCGGAGTGGGCTCCGCCGCTGGCCTTACAGGAAGGTGAAGAGTTATCAGAGGAAAATGGGAGCTTTAGGGACGAGATTGAGATCGAGAGATGCAGAGACGAGGGCCAGAGCTGAGGCTGAAATGGAAAGGCTTCGCCAAGAATTGGCTCAGTTTTGTGCCGGAATTGTACCTGATTAA

Protein sequence

MVAHRNRVKQSDSVFPFLFFKSQSEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD

Homology

[Close]

BLAST of MELO3C016901.jh1 vs. NCBI nr
Match: KAA0064525.1 (protein RKD2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 225 bits (574), Expect = 1.57e-70
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 8   VKQSDSVFPFLFFKSQSEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRS 67
           VKQSDSVFPFLFFKSQSEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRS
Sbjct: 255 VKQSDSVFPFLFFKSQSEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRS 314

Query: 68  GLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD 123
           GLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
Sbjct: 315 GLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD 370

[Close]

BLAST of MELO3C016901.jh1 vs. NCBI nr
Match: KGN55364.1 (hypothetical protein Csa_012951 [Cucumis sativus])

HSP 1 Score: 189 bits (479), Expect = 1.40e-58
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 24  SEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 83
           + QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK
Sbjct: 84  ARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 143

Query: 84  MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD 123
           MGALGTRLRSRDA TRARAEAEMERLRQELAQFCAGIVPD
Sbjct: 144 MGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD 183

[Close]

BLAST of MELO3C016901.jh1 vs. NCBI nr
Match: XP_022143764.1 (protein RKD1-like [Momordica charantia])

HSP 1 Score: 186 bits (471), Expect = 3.26e-58
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 24  SEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 83
           + QRQRAGRMTVNDLK+YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK
Sbjct: 23  ARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 82

Query: 84  MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVP 122
           MGALGTRLRSRDAETR RAEAEMERLRQELAQFCAGIVP
Sbjct: 83  MGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIVP 121

[Close]

BLAST of MELO3C016901.jh1 vs. NCBI nr
Match: TYK20065.1 (protein RKD2-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 191 bits (486), Expect = 4.96e-57
Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 24  SEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 83
           + QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK
Sbjct: 294 ARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 353

Query: 84  MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD 123
           MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
Sbjct: 354 MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD 393

[Close]

BLAST of MELO3C016901.jh1 vs. NCBI nr
Match: KAG6608345.1 (Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186 bits (471), Expect = 4.95e-55
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 24  SEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 83
           + QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK
Sbjct: 271 ARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 330

Query: 84  MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVP 122
           MGALG RLRSRDAETRARAEAEM+RLRQELAQFCAGIVP
Sbjct: 331 MGALGMRLRSRDAETRARAEAEMDRLRQELAQFCAGIVP 369

[Close]

BLAST of MELO3C016901.jh1 vs. ExPASy Swiss-Prot
Match: Q9LVU8 (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-07
Identity = 24/59 (40.68%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 21  KSQSEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS 80
           K ++ +++R  ++ ++++K++   PI +AAK++N+ LTV+KK CR  G+ RWP+RK+KS
Sbjct: 136 KKRNLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKS 194

[Close]

BLAST of MELO3C016901.jh1 vs. ExPASy Swiss-Prot
Match: Q9M9U9 (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.6e-06
Identity = 24/72 (33.33%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 41  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRA 100
           Y ++PI++AA+++N+ LT++KK CR  G++RWP+RK+ S Q+ +  +    +    E   
Sbjct: 136 YFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEGEENED 195

Query: 101 RAEAEMERLRQE 113
           +    +E+L +E
Sbjct: 196 KLRNALEKLEKE 207

[Close]

BLAST of MELO3C016901.jh1 vs. ExPASy Swiss-Prot
Match: Q9FGD1 (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-05
Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 38  LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAE 97
           +K+Y ++PI++AAK++N+ +T++KK CR  G+ RWP+RK+ S    + AL   L+     
Sbjct: 164 MKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTS----LNALIANLKDLLGN 223

Query: 98  TRARAEAEMERLRQELAQ 116
           T+ R      R   EL +
Sbjct: 224 TKGRTPKSKLRNALELLE 237

[Close]

BLAST of MELO3C016901.jh1 vs. ExPASy Swiss-Prot
Match: Q9M1B0 (Protein NLP9 OS=Arabidopsis thaliana OX=3702 GN=NLP9 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-05
Identity = 22/61 (36.07%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 33  MTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLR 92
           +++N L++Y    + +AAK + +C T +K+ICR+ G+ RWP RK+    R +  + T L 
Sbjct: 536 VSLNVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIMRWPSRKINKVNRSLRKIQTVLD 595

Query: 93  S 94
           S
Sbjct: 596 S 596

[Close]

BLAST of MELO3C016901.jh1 vs. ExPASy Swiss-Prot
Match: Q9LE38 (Protein NLP4 OS=Arabidopsis thaliana OX=3702 GN=NLP4 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.6e-05
Identity = 24/74 (32.43%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 6   NRVKQSDSVFPFLFFKSQSEQRQRAGR-MTVNDLKEYLHLPISEAAKKMNLCLTVVKKIC 65
           + V +S +     F     ++R +A + +T++ L++Y    + +AAK + +C T +K+IC
Sbjct: 531 SNVNESSTFSSGGFSMMAEKKRTKADKTITLDVLRQYFAGSLKDAAKNIGVCPTTLKRIC 590

Query: 66  RRSGLRRWPYRKVK 79
           R+ G++RWP RK+K
Sbjct: 591 RQHGIQRWPSRKIK 604

[Close]

BLAST of MELO3C016901.jh1 vs. ExPASy TrEMBL
Match: A0A5A7VF79 (Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G002430 PE=4 SV=1)

HSP 1 Score: 225 bits (574), Expect = 7.61e-71
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 8   VKQSDSVFPFLFFKSQSEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRS 67
           VKQSDSVFPFLFFKSQSEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRS
Sbjct: 255 VKQSDSVFPFLFFKSQSEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRS 314

Query: 68  GLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD 123
           GLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
Sbjct: 315 GLRRWPYRKVKSYQRKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD 370

[Close]

BLAST of MELO3C016901.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L2U8 (RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646380 PE=4 SV=1)

HSP 1 Score: 189 bits (479), Expect = 6.78e-59
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 24  SEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 83
           + QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK
Sbjct: 84  ARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 143

Query: 84  MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD 123
           MGALGTRLRSRDA TRARAEAEMERLRQELAQFCAGIVPD
Sbjct: 144 MGALGTRLRSRDAGTRARAEAEMERLRQELAQFCAGIVPD 183

[Close]

BLAST of MELO3C016901.jh1 vs. ExPASy TrEMBL
Match: A0A6J1CQA6 (protein RKD1-like OS=Momordica charantia OX=3673 GN=LOC111013572 PE=4 SV=1)

HSP 1 Score: 186 bits (471), Expect = 1.58e-58
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 24  SEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 83
           + QRQRAGRMTVNDLK+YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK
Sbjct: 23  ARQRQRAGRMTVNDLKDYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 82

Query: 84  MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVP 122
           MGALGTRLRSRDAETR RAEAEMERLRQELAQFCAGIVP
Sbjct: 83  MGALGTRLRSRDAETRNRAEAEMERLRQELAQFCAGIVP 121

[Close]

BLAST of MELO3C016901.jh1 vs. ExPASy TrEMBL
Match: A0A5D3D916 (Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001880 PE=4 SV=1)

HSP 1 Score: 191 bits (486), Expect = 2.40e-57
Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 24  SEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 83
           + QRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK
Sbjct: 294 ARQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRK 353

Query: 84  MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD 123
           MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD
Sbjct: 354 MGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGIVPD 393

[Close]

BLAST of MELO3C016901.jh1 vs. ExPASy TrEMBL
Match: A0A6J1BQU6 (protein RKD3-like OS=Momordica charantia OX=3673 GN=LOC111004772 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 3.87e-36
Identity = 65/99 (65.66%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 22  SQSEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQ 81
           S + QR R GRMTVND+ +YLHLPISEA+KK+N+C TV+KKICRRSGL RWPYRK++SY+
Sbjct: 133 SLAAQRARTGRMTVNDVWQYLHLPISEASKKLNVCNTVLKKICRRSGLSRWPYRKIRSYE 192

Query: 82  RKMGALGTRLRSRDAETRARAEAEMERLRQELAQFCAGI 120
           R++ AL   + S   +TRARAEAE+ER+++ELA FCAGI
Sbjct: 193 RRIAALRATMNSSYGDTRARAEAEIERVQKELADFCAGI 231

[Close]

BLAST of MELO3C016901.jh1 vs. TAIR 10
Match: AT5G53040.1 (RWP-RK domain-containing protein )

HSP 1 Score: 57.8 bits (138), Expect = 7.3e-09
Identity = 24/59 (40.68%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 21  KSQSEQRQRAGRMTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKS 80
           K ++ +++R  ++ ++++K++   PI +AAK++N+ LTV+KK CR  G+ RWP+RK+KS
Sbjct: 136 KKRNLKKKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKS 194

[Close]

BLAST of MELO3C016901.jh1 vs. TAIR 10
Match: AT1G18790.1 (RWP-RK domain-containing protein )

HSP 1 Score: 52.0 bits (123), Expect = 4.0e-07
Identity = 24/72 (33.33%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 41  YLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAETRA 100
           Y ++PI++AA+++N+ LT++KK CR  G++RWP+RK+ S Q+ +  +    +    E   
Sbjct: 136 YFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQKLISNVKELEKMEGEENED 195

Query: 101 RAEAEMERLRQE 113
           +    +E+L +E
Sbjct: 196 KLRNALEKLEKE 207

[Close]

BLAST of MELO3C016901.jh1 vs. TAIR 10
Match: AT5G66990.1 (RWP-RK domain-containing protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06
Identity = 28/78 (35.90%), Postives = 47/78 (60.26%), Query Frame = 0


Query: 38  LKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLRSRDAE 97
           +K+Y ++PI++AAK++N+ +T++KK CR  G+ RWP+RK+ S    + AL   L+     
Sbjct: 164 MKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRKLTS----LNALIANLKDLLGN 223

Query: 98  TRARAEAEMERLRQELAQ 116
           T+ R      R   EL +
Sbjct: 224 TKGRTPKSKLRNALELLE 237

[Close]

BLAST of MELO3C016901.jh1 vs. TAIR 10
Match: AT3G59580.1 (Plant regulator RWP-RK family protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.0e-06
Identity = 22/61 (36.07%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 33  MTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLR 92
           +++N L++Y    + +AAK + +C T +K+ICR+ G+ RWP RK+    R +  + T L 
Sbjct: 536 VSLNVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIMRWPSRKINKVNRSLRKIQTVLD 595

Query: 93  S 94
           S
Sbjct: 596 S 596

[Close]

BLAST of MELO3C016901.jh1 vs. TAIR 10
Match: AT3G59580.2 (Plant regulator RWP-RK family protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.0e-06
Identity = 22/61 (36.07%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 33  MTVNDLKEYLHLPISEAAKKMNLCLTVVKKICRRSGLRRWPYRKVKSYQRKMGALGTRLR 92
           +++N L++Y    + +AAK + +C T +K+ICR+ G+ RWP RK+    R +  + T L 
Sbjct: 536 VSLNVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIMRWPSRKINKVNRSLRKIQTVLD 595

Query: 93  S 94
           S
Sbjct: 596 S 596

The following BLAST results are available for this feature:

BLAST of MELO3C016901.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064525.1	1.57e-70	100.00	protein RKD2-like isoform X1 [Cucumis melo var. makuwa]	[more]
KGN55364.1	1.40e-58	97.00	hypothetical protein Csa_012951 [Cucumis sativus]	[more]
XP_022143764.1	3.26e-58	95.96	protein RKD1-like [Momordica charantia]	[more]
TYK20065.1	4.96e-57	98.00	protein RKD2-like isoform X1 [Cucumis melo var. makuwa]	[more]
KAG6608345.1	4.95e-55	95.96	Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MELO3C016901.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVU8	1.0e-07	40.68	Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1	[more]
Q9M9U9	5.6e-06	33.33	Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1	[more]
Q9FGD1	1.6e-05	35.90	Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1	[more]
Q9M1B0	2.8e-05	36.07	Protein NLP9 OS=Arabidopsis thaliana OX=3702 GN=NLP9 PE=2 SV=1	[more]
Q9LE38	3.6e-05	32.43	Protein NLP4 OS=Arabidopsis thaliana OX=3702 GN=NLP4 PE=2 SV=1	[more]

BLAST of MELO3C016901.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VF79	7.61e-71	100.00	Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0L2U8	6.78e-59	97.00	RWP-RK domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646380 PE=4...	[more]
A0A6J1CQA6	1.58e-58	95.96	protein RKD1-like OS=Momordica charantia OX=3673 GN=LOC111013572 PE=4 SV=1	[more]
A0A5D3D916	2.40e-57	98.00	Protein RKD2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1BQU6	3.87e-36	65.66	protein RKD3-like OS=Momordica charantia OX=3673 GN=LOC111004772 PE=4 SV=1	[more]

BLAST of MELO3C016901.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53040.1	7.3e-09	40.68	RWP-RK domain-containing protein	[more]
AT1G18790.1	4.0e-07	33.33	RWP-RK domain-containing protein	[more]
AT5G66990.1	1.2e-06	35.90	RWP-RK domain-containing protein	[more]
AT3G59580.1	2.0e-06	36.07	Plant regulator RWP-RK family protein	[more]
AT3G59580.2	2.0e-06	36.07	Plant regulator RWP-RK family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 92..119
None	No IPR available	PANTHER	PTHR46373:SF5	RWP-RK DOMAIN PROTEIN	coord: 22..119
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 33..79 e-value: 4.9E-20 score: 71.3
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 20..100 score: 17.097437
IPR044607	Transcription factor RKD-like	PANTHER	PTHR46373	PROTEIN RKD4	coord: 22..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016901.jh1.t1	MELO3C016901.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity