MELO3C016620.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C016620.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionProtein MNN4-like
Locationchr06: 29633607 .. 29633954 (-)
RNA-Seq ExpressionMELO3C016620.jh1
SyntenyMELO3C016620.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGATTCTAATGAACATAGGCAAGATAATAAACGAGCACATCATAACGAGGGGTTTGTTCCTCCTTAACCCTTCTCACACGTACTTAATTAAGAAACTATGCTTAAAGGCATATCCGGCATTAGATAATCTTCCTCAAGTAGAGGTGAAGGATGGGGTTTGTTCCTCCTCAACCCTTCACCGCATTATAGCCATCCACAAAAATAAGGCTAAGTCAAAACACCTCAAAACTAAACAAGATGGTAAATCAAAGGTTAAAAAGTTGATGATAAAGAAGAAGAATCGAGGAAGAAGGTCCACTAAAACGCAAGTGGCCAAGGCGAGGATGAGGTCTGAGGAGTGA

mRNA sequence

ATGGAGGAGATTCTAATGAACATAGGCAAGATAATAAACGAGCACATCATAACGAGGGGTTTGTTCCTCCTTAACCCTTCTCACACGTACTTAATTAAGAAACTATGCTTAAAGGCATATCCGGCATTAGATAATCTTCCTCAAGTAGAGGTGAAGGATGGGGTTTGTTCCTCCTCAACCCTTCACCGCATTATAGCCATCCACAAAAATAAGGCTAAGTCAAAACACCTCAAAACTAAACAAGATGGTAAATCAAAGGTTAAAAAGTTGATGATAAAGAAGAAGAATCGAGGAAGAAGGTCCACTAAAACGCAAGTGGCCAAGGCGAGGATGAGGTCTGAGGAGTGA

Coding sequence (CDS)

ATGGAGGAGATTCTAATGAACATAGGCAAGATAATAAACGAGCACATCATAACGAGGGGTTTGTTCCTCCTTAACCCTTCTCACACGTACTTAATTAAGAAACTATGCTTAAAGGCATATCCGGCATTAGATAATCTTCCTCAAGTAGAGGTGAAGGATGGGGTTTGTTCCTCCTCAACCCTTCACCGCATTATAGCCATCCACAAAAATAAGGCTAAGTCAAAACACCTCAAAACTAAACAAGATGGTAAATCAAAGGTTAAAAAGTTGATGATAAAGAAGAAGAATCGAGGAAGAAGGTCCACTAAAACGCAAGTGGCCAAGGCGAGGATGAGGTCTGAGGAGTGA

Protein sequence

MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSSTLHRIIAIHKNKAKSKHLKTKQDGKSKVKKLMIKKKNRGRRSTKTQVAKARMRSEE
Homology
BLAST of MELO3C016620.jh1 vs. NCBI nr
Match: KAA0025420.1 (hypothetical protein E6C27_scaffold417G00040 [Cucumis melo var. makuwa] >TYK04763.1 hypothetical protein E5676_scaffold68G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 188 bits (478), Expect = 1.67e-59
Identity = 102/115 (88.70%), Postives = 106/115 (92.17%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 60
           MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST
Sbjct: 11  MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 70

Query: 61  LHRIIAIHKNKAKSKHLKTKQDGKSKVKKLMIKKKNRGRRSTKTQVAKARMRSEE 115
           LHRIIAIHKNKAKSKHLKTKQDG+         +++RGRRSTKTQVAKARMRSEE
Sbjct: 71  LHRIIAIHKNKAKSKHLKTKQDGR---------RRDRGRRSTKTQVAKARMRSEE 116

BLAST of MELO3C016620.jh1 vs. NCBI nr
Match: KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 5.02e-23
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHT----YLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEEI +N+G+II++HII     + +P  T     LIKKLCLKA  ALDNLPQ+ VKDG+ 
Sbjct: 21  MEEIHVNVGEIISKHIIVG---VKHPRGTRPFPQLIKKLCLKACSALDNLPQIGVKDGIW 80

Query: 61  SSSTLHRIIAIHKNKAKSKHLKTKQDGKSKVK 88
           SS+TL+RIIAI++NKAK K+LK KQDGKS+VK
Sbjct: 81  SSATLYRIIAINRNKAKLKYLKAKQDGKSEVK 109

BLAST of MELO3C016620.jh1 vs. NCBI nr
Match: TYK11921.1 (hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 89.0 bits (219), Expect = 4.20e-19
Identity = 50/93 (53.76%), Postives = 69/93 (74.19%), Query Frame = 0

Query: 2   EEILMNIGKIINEHIITRGLFLLNPS----HTYLIKKLCLKAYPALDNLPQVEVKDGVCS 61
           + +L+NIG++I+EHII    ++ +P        LI++LCLK Y  L+  PQVE+KDGV +
Sbjct: 12  KHLLVNIGEMISEHIIA---WVKHPCGLRPFPQLIERLCLKTYSTLEQFPQVELKDGVWT 71

Query: 62  SSTLHRIIAIHKNKAKSKHLKTKQDGKSKVKKL 90
            +TLHRIIA+HKNKAK K  KTKQDGKS+V+K+
Sbjct: 72  VATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKV 101

BLAST of MELO3C016620.jh1 vs. NCBI nr
Match: TYK00908.1 (hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 4.87e-19
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNP----SHTYLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEE+ +N+G+II EHI+     + +P    S  +LI+KLCLK   AL+ LPQVEVKDG+C
Sbjct: 21  MEELQVNLGEIICEHILE---CVKHPYGARSFPHLIEKLCLKTCLALEKLPQVEVKDGMC 80

Query: 61  SSSTLHRIIAIHKNKAKSKHLKTKQDG 83
           ++ TL RIIAIHKNKA+ K LKTK++G
Sbjct: 81  TTITLPRIIAIHKNKARLKRLKTKKEG 104

BLAST of MELO3C016620.jh1 vs. NCBI nr
Match: TYJ97737.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 4.94e-19
Identity = 55/84 (65.48%), Postives = 61/84 (72.62%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHT--YLIKKLCLKAYPALDNLPQVEVKDGVCSS 60
           MEEI +NI KII+EHI T  + L   +    YLI+KLCLKA PALD LPQVEVKD V S+
Sbjct: 72  MEEIPVNIDKIISEHI-TAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEVWSN 131

Query: 61  STLHRIIAIHKNKAKSKHLKTKQD 82
           S  H IIAIHKNK K K LKTKQD
Sbjct: 132 SIRHHIIAIHKNKTKLKRLKTKQD 154

BLAST of MELO3C016620.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SGZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00650 PE=4 SV=1)

HSP 1 Score: 188 bits (478), Expect = 8.08e-60
Identity = 102/115 (88.70%), Postives = 106/115 (92.17%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 60
           MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST
Sbjct: 11  MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 70

Query: 61  LHRIIAIHKNKAKSKHLKTKQDGKSKVKKLMIKKKNRGRRSTKTQVAKARMRSEE 115
           LHRIIAIHKNKAKSKHLKTKQDG+         +++RGRRSTKTQVAKARMRSEE
Sbjct: 71  LHRIIAIHKNKAKSKHLKTKQDGR---------RRDRGRRSTKTQVAKARMRSEE 116

BLAST of MELO3C016620.jh1 vs. ExPASy TrEMBL
Match: A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.43e-23
Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHT----YLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEEI +N+G+II++HII     + +P  T     LIKKLCLKA  ALDNLPQ+ VKDG+ 
Sbjct: 21  MEEIHVNVGEIISKHIIVG---VKHPRGTRPFPQLIKKLCLKACSALDNLPQIGVKDGIW 80

Query: 61  SSSTLHRIIAIHKNKAKSKHLKTKQDGKSKVK 88
           SS+TL+RIIAI++NKAK K+LK KQDGKS+VK
Sbjct: 81  SSATLYRIIAINRNKAKLKYLKAKQDGKSEVK 109

BLAST of MELO3C016620.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CJD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00890 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.03e-19
Identity = 50/93 (53.76%), Postives = 69/93 (74.19%), Query Frame = 0

Query: 2   EEILMNIGKIINEHIITRGLFLLNPS----HTYLIKKLCLKAYPALDNLPQVEVKDGVCS 61
           + +L+NIG++I+EHII    ++ +P        LI++LCLK Y  L+  PQVE+KDGV +
Sbjct: 12  KHLLVNIGEMISEHIIA---WVKHPCGLRPFPQLIERLCLKTYSTLEQFPQVELKDGVWT 71

Query: 62  SSTLHRIIAIHKNKAKSKHLKTKQDGKSKVKKL 90
            +TLHRIIA+HKNKAK K  KTKQDGKS+V+K+
Sbjct: 72  VATLHRIIAVHKNKAKFKRHKTKQDGKSEVEKV 101

BLAST of MELO3C016620.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BPB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00710 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.36e-19
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNP----SHTYLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEE+ +N+G+II EHI+     + +P    S  +LI+KLCLK   AL+ LPQVEVKDG+C
Sbjct: 21  MEELQVNLGEIICEHILE---CVKHPYGARSFPHLIEKLCLKTCLALEKLPQVEVKDGMC 80

Query: 61  SSSTLHRIIAIHKNKAKSKHLKTKQDG 83
           ++ TL RIIAIHKNKA+ K LKTK++G
Sbjct: 81  TTITLPRIIAIHKNKARLKRLKTKKEG 104

BLAST of MELO3C016620.jh1 vs. ExPASy TrEMBL
Match: A0A5D3BF32 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00380 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.39e-19
Identity = 55/84 (65.48%), Postives = 61/84 (72.62%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHT--YLIKKLCLKAYPALDNLPQVEVKDGVCSS 60
           MEEI +NI KII+EHI T  + L   +    YLI+KLCLKA PALD LPQVEVKD V S+
Sbjct: 72  MEEIPVNIDKIISEHI-TAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEVWSN 131

Query: 61  STLHRIIAIHKNKAKSKHLKTKQD 82
           S  H IIAIHKNK K K LKTKQD
Sbjct: 132 SIRHHIIAIHKNKTKLKRLKTKQD 154

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0025420.11.67e-5988.70hypothetical protein E6C27_scaffold417G00040 [Cucumis melo var. makuwa] >TYK0476... [more]
KAA0060282.15.02e-2361.96drebrin-like [Cucumis melo var. makuwa][more]
TYK11921.14.20e-1953.76hypothetical protein E5676_scaffold177G00890 [Cucumis melo var. makuwa][more]
TYK00908.14.87e-1956.32hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa][more]
TYJ97737.14.94e-1965.48protein MNN4-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SGZ88.08e-6088.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UWQ42.43e-2361.96Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE... [more]
A0A5D3CJD12.03e-1953.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BPB12.36e-1956.32Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BF322.39e-1965.48Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016620.jh1.t1MELO3C016620.jh1.t1mRNA