MELO3C016549 (gene) Melon (DHL92) v4

Overview
NameMELO3C016549
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionU3 small nucleolar RNA-associated protein 14 B isoform 1
Locationchr06: 26097910 .. 26100750 (-)
RNA-Seq ExpressionMELO3C016549
SyntenyMELO3C016549
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATTCCAACCTCATTTTTTTTCTGTAAAGGGACCAACAACGGCCACAGGATAACGAGGCAGCCGTATACGGAACAATCAATAACATCTTACTCACACTCACTCCAGATAATCAATAATCCATCATGAATTTCTTCTTCACGTCTCAGATTTCAAACCCTGCTTCCTAATACTTCCTTCATTCCCAAATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTTTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCATCTGCAATCCGAGTGGGCTTCGTTTGAGGTTTTATGGGCGGAGATTGTTCTTTCCGGGTGGTGGTTGGGTTGAACAACGGGTTTTTGGAAAACATAGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGCGGTGACGGCGGAGACGATGGGGCAACTGCAAGGCTTCTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTTTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGGTATGTATTCTTCTTCTTCTTCTCTGTTTCTCTGCTTTTGATTCGGGAGTTTAAGATCTATTTTTTCTCTTTGGAAAACTGGGTGAAATGTGCTTGATTTTAGCAGTTTTAGTTTTAGTGATTATTGATGAGCATTTAAATGACGCTATACTTTTACTTCCAATGTGCTCTTTTTATTTTAATTTAGCTGGTATTATCACTTCTGGGTTCAATATTCATGTCGCCATTTATCTTATTAAGACAATAAGATCCTCGGCATGTCTTAAAAATGATTCAAATTTTGTTTTGGATTGAATATCAAATTACTGATTCACCCAAAAACTTAAACTAATGAACTGATAATTTAATTGTATCTATTCTTTAGCCATCGCTGTAACTAGTTCTTATTTCGGATTTCTTAACATTTCCAATGAAACATAAAATTTTTCCTTTTAGATGTGATGGAAGTGGAAGGGGAGCTTTTCAACCTTACATTAAAGGGCATTTTCTTTTATATTTGTGAAGAATAAAATGAGAATCGTTAGATATTATATTAAATTTATCATTACCTACGGGCTTAAGTTTTTTTCGGTGAATGGATAATTTAAAATACTATCATAACAAATTGTTTCAAGATGTCTTGAGTTCAAGCCCTTGGAATATTATTTCTTTCCCAATTAATATCTATTTGCTTGGCATGCAAATGCAAGTGAAGGGAATGTTAGATATTATATTTAATTATCCTTACTTACTAGCTTAAGCTTTTAGATGACCGGTGATTTAAGAAGAGTTATAAGGATATATAGTATTCTTACAGAGAGGTTGATTGAGAAAGTGTGGCTAACTTCAATCCCTTCCTTTAGATATATGCTATCAAGTTCTTTTAGAATTATAATTAGATGTAATTTTTGTTCATTAACCATAGGAGCTCCTTTCTAAAATTTAGTTTTGTTTTTGGATGAAATATTTCTTTTCTGAAGTTTAGTTGCGTTTTTGGATGAAATATCTTTGATTTGCTTCATCTGGCTCGGGCTTTAAAAACTGGTTTCTAATGGGATTTGTTTGGATTCAAGAACCGATTGAAGATGAATTCCCTTTTGTTTTAGCTTTTAGAGCCTTGATTTGATCTGTTAACATATATGGCTATTCAGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGTGATATAGTTCAAAGCAATGTTAGTCTTTATTATATCTTTTGCATTTTCAACCTCAAATCTTGAGCTTATGTAATGACAGACTGCCACTTCTTGTCTTGCATTTGCAGTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAAGTGATCTTGAAAGAACTTGTTTGAGGAGATAACTCGATCTTGAAATGATTAGCACACTTCATTTACATCCATATTACAGATCAACACTAAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTCTCTGGTAAATCCCAAGTTTTTATAGATCTTAAGTTCTTATTGTTGTTGGATCATAAACTGTTAGTTTATATTGGTTCGCTTCGTTTTTCTTTTCCTTGTATGTAAGAACATCAAATACTGCATAACTTCTTATTCATTTGTGTATTGATTCTTCCTTTACAAATTCAGTGGTGGATGACAAGTTTGTGAGGGACTCGGTGACGTTCTCCAAGAAAACTTCTTCCACCTTTGGACAGGCTTTTAGTGACTTTACTTCTCCCAGAAAAGGTAAGATTCTTCCTCGACTATATCCCCCCCCCCCCCCCCAAACAAATATTTAACCTACTTGAAACTCAACCACCTCTTGTGATTGATTGATTGAAGGGAAGGAAACTTCTGGTGCAGTTGTCGACATAGAAGCAGAAGTAAAAGATGTGGACTGAACTCGTCTTGGTAAGCGGTTGATTTTGTTGTTGACCGTAGTCTTAAGATACTTGTAAGTGTTCAAATAGCATGCTTTTTCTTATGCAATGCTTGTGAACCATGGATTACAGTTAGTAGTCTTCAGAAGCACATCAAAATTTAGGGGGACAAGATCAGTTGGTTCAATTGGGTTTGCCAGATTGAATTAATTTTTGACACTGGAGATCTTTGTATATTCGTTATATGTTCTTCATGGGTAGAATTTCCAATTCTGAAACAACTGTAGAAATTTGTGAAATGCCTTCACTTTTTGTATATTGATTTTGATACAATAAGTCTAAGGTACAGGCTTTACTCTATAACTAATAAAGACTGATGGACTACAACAT

mRNA sequence

GAATTCCAACCTCATTTTTTTTCTGTAAAGGGACCAACAACGGCCACAGGATAACGAGGCAGCCGTATACGGAACAATCAATAACATCTTACTCACACTCACTCCAGATAATCAATAATCCATCATGAATTTCTTCTTCACGTCTCAGATTTCAAACCCTGCTTCCTAATACTTCCTTCATTCCCAAATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTTTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCATCTGCAATCCGAGTGGGCTTCGTTTGAGGTTTTATGGGCGGAGATTGTTCTTTCCGGGTGGTGGTTGGGTTGAACAACGGGTTTTTGGAAAACATAGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGCGGTGACGGCGGAGACGATGGGGCAACTGCAAGGCTTCTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTTTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGTGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAAGTGATCTTGAAAGAACTTGTTTGAGGAGATAACTCGATCTTGAAATGATTAGCACACTTCATTTACATCCATATTACAGATCAACACTAAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTCTCTGTGGTGGATGACAAGTTTGTGAGGGACTCGGTGACGTTCTCCAAGAAAACTTCTTCCACCTTTGGACAGGCTTTTAGTGACTTTACTTCTCCCAGAAAAGGAAACTTCTGGTGCAGTTGTCGACATAGAAGCAGAAGTAAAAGATGTGGACTGAACTCGTCTTGGTAAGCGGTTGATTTTGTTGTTGACCGTAGTCTTAAGATACTTGTAAGTGTTCAAATAGCATGCTTTTTCTTATGCAATGCTTGTGAACCATGGATTACAGTTAGTAGTCTTCAGAAGCACATCAAAATTTAGGGGGACAAGATCAGTTGGTTCAATTGGGTTTGCCAGATTGAATTAATTTTTGACACTGGAGATCTTTGTATATTCGTTATATGTTCTTCATGGGTAGAATTTCCAATTCTGAAACAACTGTAGAAATTTGTGAAATGCCTTCACTTTTTGTATATTGATTTTGATACAATAAGTCTAAGGTACAGGCTTTACTCTATAACTAATAAAGACTGATGGACTACAACAT

Coding sequence (CDS)

ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTTTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCATCTGCAATCCGAGTGGGCTTCGTTTGAGGTTTTATGGGCGGAGATTGTTCTTTCCGGGTGGTGGTTGGGTTGAACAACGGGTTTTTGGAAAACATAGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGCGGTGACGGCGGAGACGATGGGGCAACTGCAAGGCTTCTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTTTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGTGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAA

Protein sequence

MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Homology
[Close]
BLAST of MELO3C016549 vs. NCBI nr
Match: XP_008452285.1 (PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 uncharacterized protein E6C27_scaffold230G00230 [Cucumis melo var. makuwa] >TYK03278.1 uncharacterized protein E5676_scaffold298G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 352.4 bits (903), Expect = 2.1e-93
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120
           VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120

Query: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 171
           LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Sbjct: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 170

[Close]
BLAST of MELO3C016549 vs. NCBI nr
Match: XP_004149291.1 (uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical protein Csa_010420 [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 3.9e-87
Identity = 163/176 (92.61%), Postives = 165/176 (93.75%), Query Frame = 0 

Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGG------GGDGGDDGATARLLGNIALAAGLTY 120
           VFGKH GFKGKRGRLIVARFNQGFGFNGG      GGDGGDDGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 171
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176

[Close]
BLAST of MELO3C016549 vs. NCBI nr
Match: XP_038905451.1 (uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_038905452.1 uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida])

HSP 1 Score: 271.2 bits (692), Expect = 6.2e-69
Identity = 143/172 (83.14%), Postives = 147/172 (85.47%), Query Frame = 0 

Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFST NILH++FCNKPTKFNPLP PKV   + +G RLR YGRRL F        R
Sbjct: 1   MTSFIRFSTLNILHDSFCNKPTKFNPLPAPKVASWDRNGFRLRVYGRRLSFLDVCRGNVR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFN--GGGGDGGDDGATARLLGNIALAAGLTYLSVT 120
           VFGKH G KGKRG LIVARFNQGFGFN  GGGG GGDDGATARLLGNIALA GLTYLSVT
Sbjct: 61  VFGKHGGSKGKRG-LIVARFNQGFGFNGGGGGGGGGDDGATARLLGNIALAVGLTYLSVT 120

Query: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 171
           GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Sbjct: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFK 171

[Close]
BLAST of MELO3C016549 vs. NCBI nr
Match: XP_038905448.1 (uncharacterized protein LOC120091477 isoform X1 [Benincasa hispida] >XP_038905449.1 uncharacterized protein LOC120091477 isoform X1 [Benincasa hispida] >XP_038905450.1 uncharacterized protein LOC120091477 isoform X1 [Benincasa hispida])

HSP 1 Score: 271.2 bits (692), Expect = 6.2e-69
Identity = 143/172 (83.14%), Postives = 147/172 (85.47%), Query Frame = 0 

Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFST NILH++FCNKPTKFNPLP PKV   + +G RLR YGRRL F        R
Sbjct: 1   MTSFIRFSTLNILHDSFCNKPTKFNPLPAPKVASWDRNGFRLRVYGRRLSFLDVCRGNVR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFN--GGGGDGGDDGATARLLGNIALAAGLTYLSVT 120
           VFGKH G KGKRG LIVARFNQGFGFN  GGGG GGDDGATARLLGNIALA GLTYLSVT
Sbjct: 61  VFGKHGGSKGKRG-LIVARFNQGFGFNGGGGGGGGGDDGATARLLGNIALAVGLTYLSVT 120

Query: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 171
           GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Sbjct: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFK 171

[Close]
BLAST of MELO3C016549 vs. NCBI nr
Match: XP_022985259.1 (uncharacterized protein LOC111483302 [Cucurbita maxima])

HSP 1 Score: 268.5 bits (685), Expect = 4.0e-68
Identity = 139/172 (80.81%), Postives = 149/172 (86.63%), Query Frame = 0 

Query: 1   MTSFIRFSTFN-ILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQ 60
           MTSFIRFS+FN +LH+NF  KPT+FNPLPPPKV  C+ +G RLR  G +L F  GGW  +
Sbjct: 1   MTSFIRFSSFNLLLHDNFYKKPTRFNPLPPPKVASCDRNGFRLRLCGGKLPFLSGGWSNK 60

Query: 61  RVFGKHRGFKGKRGRLIVARFNQGFGFN-GGGGDGGDDGATARLLGNIALAAGLTYLSVT 120
            V GK+  FKGKRG LIVARFNQGFGFN GGGG GGDDGATARLLGNIALAAGLTYLSVT
Sbjct: 61  GVLGKYGVFKGKRG-LIVARFNQGFGFNGGGGGGGGDDGATARLLGNIALAAGLTYLSVT 120

Query: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 171
           GQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Sbjct: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFK 171

[Close]
BLAST of MELO3C016549 vs. ExPASy TrEMBL
Match: A0A5A7TVG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001050 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.0e-93
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120
           VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120

Query: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 171
           LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Sbjct: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 170

[Close]
BLAST of MELO3C016549 vs. ExPASy TrEMBL
Match: A0A1S3BUA7 (uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.0e-93
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120
           VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGNIALAAGLTYLSVTGQ 120

Query: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 171
           LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Sbjct: 121 LGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 170

[Close]
BLAST of MELO3C016549 vs. ExPASy TrEMBL
Match: A0A0A0L5A4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.9e-87
Identity = 163/176 (92.61%), Postives = 165/176 (93.75%), Query Frame = 0 

Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGG------GGDGGDDGATARLLGNIALAAGLTY 120
           VFGKH GFKGKRGRLIVARFNQGFGFNGG      GGDGGDDGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 171
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176

[Close]
BLAST of MELO3C016549 vs. ExPASy TrEMBL
Match: A0A6J1JCT5 (uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.9e-68
Identity = 139/172 (80.81%), Postives = 149/172 (86.63%), Query Frame = 0 

Query: 1   MTSFIRFSTFN-ILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQ 60
           MTSFIRFS+FN +LH+NF  KPT+FNPLPPPKV  C+ +G RLR  G +L F  GGW  +
Sbjct: 1   MTSFIRFSSFNLLLHDNFYKKPTRFNPLPPPKVASCDRNGFRLRLCGGKLPFLSGGWSNK 60

Query: 61  RVFGKHRGFKGKRGRLIVARFNQGFGFN-GGGGDGGDDGATARLLGNIALAAGLTYLSVT 120
            V GK+  FKGKRG LIVARFNQGFGFN GGGG GGDDGATARLLGNIALAAGLTYLSVT
Sbjct: 61  GVLGKYGVFKGKRG-LIVARFNQGFGFNGGGGGGGGDDGATARLLGNIALAAGLTYLSVT 120

Query: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 171
           GQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Sbjct: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFK 171

[Close]
BLAST of MELO3C016549 vs. ExPASy TrEMBL
Match: A0A6J1EMN9 (uncharacterized protein LOC111435981 OS=Cucurbita moschata OX=3662 GN=LOC111435981 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.4e-68
Identity = 138/172 (80.23%), Postives = 147/172 (85.47%), Query Frame = 0 

Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60
           MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C+ +G RLR    +L F  GGW    
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60

Query: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGG--GGDGGDDGATARLLGNIALAAGLTYLSVT 120
           V GK+  FKGKRG LIVARFNQGFGFNGG  GG GGDDGATARLLGNIALAAGLTYLSVT
Sbjct: 61  VSGKYGVFKGKRG-LIVARFNQGFGFNGGGSGGGGGDDGATARLLGNIALAAGLTYLSVT 120

Query: 121 GQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 171
           GQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Sbjct: 121 GQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFK 171

[Close]
BLAST of MELO3C016549 vs. TAIR 10
Match: AT4G27390.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 59/79 (74.68%), Postives = 70/79 (88.61%), Query Frame = 0 

Query: 92  DGGDDGATARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAG 151
           +GGD+    R+LGN+ALA GLTYLS+TGQLGW+LDAIVS+WL+ V+VPI+G+ AF WWA 
Sbjct: 87  NGGDNNGNGRILGNLALAIGLTYLSMTGQLGWILDAIVSVWLIVVIVPILGLGAFFWWAQ 146

Query: 152 RDIVQSNCPNCGNEFQIFK 171
           RDIVQSNCPNCGNEFQIFK
Sbjct: 147 RDIVQSNCPNCGNEFQIFK 165

The following BLAST results are available for this feature:
BLAST of MELO3C016549 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008452285.12.1e-93100.00PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 unc... [more]
XP_004149291.13.9e-8792.61uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical ... [more]
XP_038905451.16.2e-6983.14uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_03890545... [more]
XP_038905448.16.2e-6983.14uncharacterized protein LOC120091477 isoform X1 [Benincasa hispida] >XP_03890544... [more]
XP_022985259.14.0e-6880.81uncharacterized protein LOC111483302 [Cucurbita maxima][more]
BLAST of MELO3C016549 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C016549 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TVG51.0e-93100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BUA71.0e-93100.00uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=... [more]
A0A0A0L5A41.9e-8792.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1[more]
A0A6J1JCT51.9e-6880.81uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302... [more]
A0A6J1EMN97.4e-6880.23uncharacterized protein LOC111435981 OS=Cucurbita moschata OX=3662 GN=LOC1114359... [more]
BLAST of MELO3C016549 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G27390.11.4e-3174.68unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36785OS05G0502500 PROTEINcoord: 9..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016549.1MELO3C016549.1mRNA