Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAATGAAGGAGTTACATCGGTAGAGATGAATATACAAACAGGATTGGTAAAAATCAGTGGAGAAAGCAACTTCGATCCATCAATCTTTGTCAAAACAATTGCAAAAACCGGCAAAAAAGCTCAATTTCCGGCCACGGAGAACAGCGCACCGGCACCCACACCCACGGCCACACCGATAGGCCAAAACCCACAATTTCCGACCCGGGAGAATATGACCTCGGCACCGGCGGCTACCAGTGACAATGCTTCGGGTCATCATGTTCGTAACAAGAATTCTATTAATTCAAACAATCACTGTTGCAAAAGCGAAAGGACGACCCACTATGGAAATTCTGACGCCGGTAATTTTTCCGACCACCGTAGCCGGTCCGACAAGGTTCACATAAACGAGGCGGCAGCCGTCAATCCGCCAGTGCCTCTGCCACTTCCCAACCGAATGTTTATGCGACCGCCGATGTCATCACCGCGCCTGCCACCGCCTCCGCAATATGGAGATATGAGTTTTCGTGGAAGTCATGGTTTTTGGCCCGGAATGTCGGAACCATGGTCGTCAGCGTCACCCCCACCGCCGCCGATGACAGCAATGGCACCGCCGCATAGCTATTATCGGTGGCCGGAACCCGTACCTTACTATTTGCAAGAGCAACAGCCACCGGTGGGGAATACGCCGAGCCACTACCTATTCAACGACGAGAATACAGAAGGGTGTGTTATTATTTAG
mRNA sequence
ATGGCTTCCAATGAAGGAGTTACATCGGTAGAGATGAATATACAAACAGGATTGGTAAAAATCAGTGGAGAAAGCAACTTCGATCCATCAATCTTTGTCAAAACAATTGCAAAAACCGGCAAAAAAGCTCAATTTCCGGCCACGGAGAACAGCGCACCGGCACCCACACCCACGGCCACACCGATAGGCCAAAACCCACAATTTCCGACCCGGGAGAATATGACCTCGGCACCGGCGGCTACCAGTGACAATGCTTCGGGTCATCATGTTCGTAACAAGAATTCTATTAATTCAAACAATCACTGTTGCAAAAGCGAAAGGACGACCCACTATGGAAATTCTGACGCCGGTAATTTTTCCGACCACCGTAGCCGGTCCGACAAGGTTCACATAAACGAGGCGGCAGCCGTCAATCCGCCAGTGCCTCTGCCACTTCCCAACCGAATGTTTATGCGACCGCCGATGTCATCACCGCGCCTGCCACCGCCTCCGCAATATGGAGATATGAGTTTTCGTGGAAGTCATGGTTTTTGGCCCGGAATGTCGGAACCATGGTCGTCAGCGTCACCCCCACCGCCGCCGATGACAGCAATGGCACCGCCGCATAGCTATTATCGGTGGCCGGAACCCGTACCTTACTATTTGCAAGAGCAACAGCCACCGGTGGGGAATACGCCGAGCCACTACCTATTCAACGACGAGAATACAGAAGGGTGTGTTATTATTTAG
Coding sequence (CDS)
ATGGCTTCCAATGAAGGAGTTACATCGGTAGAGATGAATATACAAACAGGATTGGTAAAAATCAGTGGAGAAAGCAACTTCGATCCATCAATCTTTGTCAAAACAATTGCAAAAACCGGCAAAAAAGCTCAATTTCCGGCCACGGAGAACAGCGCACCGGCACCCACACCCACGGCCACACCGATAGGCCAAAACCCACAATTTCCGACCCGGGAGAATATGACCTCGGCACCGGCGGCTACCAGTGACAATGCTTCGGGTCATCATGTTCGTAACAAGAATTCTATTAATTCAAACAATCACTGTTGCAAAAGCGAAAGGACGACCCACTATGGAAATTCTGACGCCGGTAATTTTTCCGACCACCGTAGCCGGTCCGACAAGGTTCACATAAACGAGGCGGCAGCCGTCAATCCGCCAGTGCCTCTGCCACTTCCCAACCGAATGTTTATGCGACCGCCGATGTCATCACCGCGCCTGCCACCGCCTCCGCAATATGGAGATATGAGTTTTCGTGGAAGTCATGGTTTTTGGCCCGGAATGTCGGAACCATGGTCGTCAGCGTCACCCCCACCGCCGCCGATGACAGCAATGGCACCGCCGCATAGCTATTATCGGTGGCCGGAACCCGTACCTTACTATTTGCAAGAGCAACAGCCACCGGTGGGGAATACGCCGAGCCACTACCTATTCAACGACGAGAATACAGAAGGGTGTGTTATTATTTAG
Protein sequence
MASNEGVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTATPIGQNPQFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCVII
Homology
BLAST of MELO3C015863 vs. NCBI nr
Match:
KAA0057596.1 (hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa])
HSP 1 Score: 491.1 bits (1263), Expect = 5.4e-135
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
Query: 1 MASNEGVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTAT 60
MASNEGVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTAT
Sbjct: 1 MASNEGVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTAT 60
Query: 61 PIGQNPQFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFS 120
PIGQNPQFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFS
Sbjct: 61 PIGQNPQFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFS 120
Query: 121 DHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPG 180
DHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPG
Sbjct: 121 DHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPG 180
Query: 181 MSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCV 240
MSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCV
Sbjct: 181 MSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCV 240
Query: 241 II 243
II
Sbjct: 241 II 242
BLAST of MELO3C015863 vs. NCBI nr
Match:
TYK20998.1 (hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa])
HSP 1 Score: 352.4 bits (903), Expect = 3.0e-93
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 74 MTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINE 133
MTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINE
Sbjct: 1 MTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINE 60
Query: 134 AAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWSSASPPPP 193
AAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWSSASPPPP
Sbjct: 61 AAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWSSASPPPP 120
Query: 194 PMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCVII 243
PMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCVII
Sbjct: 121 PMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCVII 169
BLAST of MELO3C015863 vs. NCBI nr
Match:
KGN45423.2 (hypothetical protein Csa_015802, partial [Cucumis sativus])
HSP 1 Score: 270.4 bits (690), Expect = 1.5e-68
Identity = 142/189 (75.13%), Postives = 152/189 (80.42%), Query Frame = 0
Query: 56 TPTATPIGQNPQFPTRENMTSAP-----AATSDNASGHHVRNKNSINSNNHCCKSERTTH 115
T +PI QNPQFPT+ENMTSAP A +SDNASGH + + +SINSNNHCCKS+
Sbjct: 4 TAAPSPIAQNPQFPTKENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSD---- 63
Query: 116 YGNSDAGNFSDHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGD-M 175
GNSDAGNFSDHRS DKVHINEAA+VNPPV LPL NRM MRPPM S R PPPPQYGD M
Sbjct: 64 -GNSDAGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHM 123
Query: 176 SFRGSHGFWPGMSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHY 235
FRGSHGFWPGMSEPWSS S PP PPHSYYRWPEPVPYYLQEQQPPVGNTP+HY
Sbjct: 124 GFRGSHGFWPGMSEPWSSPSHPP-------PPHSYYRWPEPVPYYLQEQQPPVGNTPNHY 180
Query: 236 LFNDENTEG 239
+FNDENTEG
Sbjct: 184 VFNDENTEG 180
BLAST of MELO3C015863 vs. NCBI nr
Match:
KAG6593135.1 (hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 112.5 bits (280), Expect = 5.3e-21
Identity = 95/248 (38.31%), Postives = 117/248 (47.18%), Query Frame = 0
Query: 1 MASNEGVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTAT 60
MA+NE V SV ++IQ GLV I+ FDP V+ +++TGK A+ +APAP
Sbjct: 1 MAANEDVKSVAIDIQKGLVTITANYTFDPLTIVRAMSRTGKLARLQPMGYAAPAP----- 60
Query: 61 PIGQNPQFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFS 120
+A AA D+ N S S+ HC K + T N G
Sbjct: 61 ---------------AASAAVRDSVH----PNIPSAASDPHCNKIDWTQ---NCVPG--- 120
Query: 121 DHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPG 180
S KVH NEAA PPV +P +R+ +R P Q+G + S GF
Sbjct: 121 -----SSKVHFNEAAGAVPPVDVPYRHRLSLR---------PGSQFGGVGHDASRGFGRP 180
Query: 181 MSEPWSSASPP--PPPM-TAMAPPHSYYRWPEPVPYYLQEQQPP---VGNTPSHYLFNDE 240
M EP PP PP M AM P YYRW EP PYY Q+Q PP V P HYLFNDE
Sbjct: 181 MMEPLPQPLPPAMPPAMPPAMPPGDGYYRWSEPPPYYWQQQPPPAPAVAAAPGHYLFNDE 204
Query: 241 NTEGCVII 243
N + C II
Sbjct: 241 NVDACKII 204
BLAST of MELO3C015863 vs. ExPASy TrEMBL
Match:
A0A5A7UTY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00730 PE=4 SV=1)
HSP 1 Score: 491.1 bits (1263), Expect = 2.6e-135
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
Query: 1 MASNEGVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTAT 60
MASNEGVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTAT
Sbjct: 1 MASNEGVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTAT 60
Query: 61 PIGQNPQFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFS 120
PIGQNPQFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFS
Sbjct: 61 PIGQNPQFPTRENMTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFS 120
Query: 121 DHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPG 180
DHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPG
Sbjct: 121 DHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPG 180
Query: 181 MSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCV 240
MSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCV
Sbjct: 181 MSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCV 240
Query: 241 II 243
II
Sbjct: 241 II 242
BLAST of MELO3C015863 vs. ExPASy TrEMBL
Match:
A0A0A0K5U2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392360 PE=4 SV=1)
HSP 1 Score: 354.4 bits (908), Expect = 3.8e-94
Identity = 188/248 (75.81%), Postives = 204/248 (82.26%), Query Frame = 0
Query: 1 MASNEGVTSVEMNIQTGLVKISGESNFDPSIFVKTIAKTGKKAQFPATENSAPAPTPTAT 60
MASNEGVTSVEMNI+TGLVKISGE NFDP IF+KTI K GKKAQFPA +N+A AP +
Sbjct: 1 MASNEGVTSVEMNIETGLVKISGEKNFDPFIFLKTITKAGKKAQFPAMQNTA-AP----S 60
Query: 61 PIGQNPQFPTRENMTSAP-----AATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSD 120
PI QNPQFPT+ENMTSAP A +SDNASGH + + +SINSNNHCCKS+ GNSD
Sbjct: 61 PIAQNPQFPTKENMTSAPAPAPAATSSDNASGHPIHHSHSINSNNHCCKSD-----GNSD 120
Query: 121 AGNFSDHRSRSDKVHINEAAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGD-MSFRGS 180
AGNFSDHRS DKVHINEAA+VNPPV LPL NRM MRPPM S R PPPPQYGD M FRGS
Sbjct: 121 AGNFSDHRSWPDKVHINEAASVNPPVALPLHNRMLMRPPMPSLRPPPPPQYGDHMGFRGS 180
Query: 181 HGFWPGMSEPWSSASPPPPPMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDE 240
HGFWPGMSEPWSS S PP PPHSYYRWPEPVPYYLQEQQPPVGNTP+HY+FNDE
Sbjct: 181 HGFWPGMSEPWSSPSHPP-------PPHSYYRWPEPVPYYLQEQQPPVGNTPNHYVFNDE 231
Query: 241 NTEGCVII 243
NTEGC+I+
Sbjct: 241 NTEGCIIV 231
BLAST of MELO3C015863 vs. ExPASy TrEMBL
Match:
A0A5D3DBX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00250 PE=4 SV=1)
HSP 1 Score: 352.4 bits (903), Expect = 1.5e-93
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query: 74 MTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINE 133
MTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINE
Sbjct: 1 MTSAPAATSDNASGHHVRNKNSINSNNHCCKSERTTHYGNSDAGNFSDHRSRSDKVHINE 60
Query: 134 AAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWSSASPPPP 193
AAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWSSASPPPP
Sbjct: 61 AAAVNPPVPLPLPNRMFMRPPMSSPRLPPPPQYGDMSFRGSHGFWPGMSEPWSSASPPPP 120
Query: 194 PMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCVII 243
PMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCVII
Sbjct: 121 PMTAMAPPHSYYRWPEPVPYYLQEQQPPVGNTPSHYLFNDENTEGCVII 169
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0057596.1 | 5.4e-135 | 100.00 | hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa] | [more] |
TYK20998.1 | 3.0e-93 | 100.00 | hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa] | [more] |
KGN45423.2 | 1.5e-68 | 75.13 | hypothetical protein Csa_015802, partial [Cucumis sativus] | [more] |
KAG6593135.1 | 5.3e-21 | 38.31 | hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UTY4 | 2.6e-135 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A0A0K5U2 | 3.8e-94 | 75.81 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392360 PE=4 SV=1 | [more] |
A0A5D3DBX5 | 1.5e-93 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |