MELO3C015701 (gene) Melon (DHL92) v4

Overview
NameMELO3C015701
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
Descriptioncysteine protease XCP1-like
Locationchr01: 27578318 .. 27580270 (-)
RNA-Seq ExpressionMELO3C015701
SyntenyMELO3C015701
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATAAGTGTGAAACTGTTAGCCATTTACCTAATGTTAAAATAAGAATAATAATAATTCTAAACATAACTTAGTGAAAAAGATTGCAAAAAAGAACCAATCTTAAAGACACAGTATTAACAAAAATATTGAAATGGAATAAACTGCTTCACTTTAAAGAAATCCCACAAAATCTACCAAACAAACAGTTTATATAAGAACCCCCCAACCCCCTTTCTCTACTCATTCCACCAATTTCTTTCCTCTCCTTCAAAAATGGCTTTCTCTACCTTCTCCAAAACAACCCTCATCCTCTCTGCCACTTTATTCATCACTTACGGTATCGCTCATGATTTTTCAATCGTAGGCTATTCCCCCGAGCACTTAGCCTCCATGGATAAAACCATCGAGCTGTTTGAGTCATGGATGTCAAAGCACAGTAAAACGTATCGGAGTGTTGAAGAGAAACTCCATAGATTTGAGATATTCCTCGACAATTTGAAGCACATTGATGAAACAAACAAGAAGGTTTCTAGCTATTGGCTGGGGTTGAATGAATTTGCAGACCTGAGCCATGAAGAATTCAAGAGTAAATATTTGGGATTGAGAGTTGAGTTTCCGAGGAAACGATCGTCTCGTGGGTTTAGCTATAGAGATGTGGAGGACTTGCCCGAGTCGGTTGATTGGAGAACTAAAGGAGCTGTTACTCCTGTCAAGAACCAAGGCTCTTGCGGTCTCTTCCTTTTTGCATCTATTTATTTCTACCTAGTTATGGTAAGAGTTCAAAACTTTCCTACATGATATTTGAACAAAACTATGATTTGAAATTCAGGGAGTTGCTGGGCATTTTCAACCGTTGCGGCTGTGGAGGGGATAAACCAAATTGTCACTGGAAATCTAACCTCCTTGTCCGAACAAGAATTGATCGATTGTGACCGAAGCTTCAACAACGGGTGCTACGGTGGTTTGATGGATTATGCCTTCCAATACATAATGTCGAATTCCGGACTTCGAAAGGAAGAAGACTACCCATATCTAATGGAGGAAGGAAGATGTATCAGAGAAAAGGTGAAAACTTAATCTTCTAGAAACACAAAAAACAAAGCTTGCACTTCCTAATATTTACTAAAAACATGTTACTATAATCCCTAGGAACAATTTGAGGTAGTGACCATTAGCGGTTACGAAGATGTGCCAGCAAACGATGAACAGAGTCTCCTAAAAGCATTGAGTCACCAACCTGTCAGTGTAGCCATTGAAGCTTCTGGTAGAAATTTCCAATTCTACAAAGGGGTAAGATTGTAAACGCAGTCATACTTCTACTTTTCTTCATAAAGAATTTGAAATGGATGGTTTGGTTCTGCTTTGAGTTTGACCTAACCACAAAATCATTGGTTTGTCTTTCAACAGGGAATATTCACAGGCCGTTGTGGAACCGAAATGGATCATGGCGTGACAGCCGTTGGGTATGGTTCATCAGAGGGAACAGACTACATTATAGTAAAGAACTCATGGGGACCAAAATGGGGAGAAAATGGATATATTAGGATGAAGAGAAATACAGGAAAACCTGAAGGACTATGTGGAATCAACCAAATGGCTTCTTATCCAACCAAAGAGAAATAATCCAATGAAGTTAGCCCTCTAGTCTCTATGATTGTCATATTCTTTTTTTCTTCCCACCAATTTCCTTTCAAATCGATATGAAAGGCAACTTTTATTACCTTTTAACAATAAAAGGACCAAATTTGTAATGGTTTGACATGAAATAAATTGCTACTCCTTTTAGAATATTGCATCTTATTACCAGAAAGGTTTTTTTTCTTAAAAGAACCCTTCCCAAGTGGCCCAAAGAATGGCAACACTAAATGAAGAAAGGGTAGCATAACGACAAAAAGAAAGAACAAAAATTCTAGGTTTCACATAATAGAAAATGTGGGGAAATTACTCGCTGCAGTATGTCAACAATTCTCCAG

mRNA sequence

CATAAGTGTGAAACTGTTAGCCATTTACCTAATGTTAAAATAAGAATAATAATAATTCTAAACATAACTTAGTGAAAAAGATTGCAAAAAAGAACCAATCTTAAAGACACAGTATTAACAAAAATATTGAAATGGAATAAACTGCTTCACTTTAAAGAAATCCCACAAAATCTACCAAACAAACAGTTTATATAAGAACCCCCCAACCCCCTTTCTCTACTCATTCCACCAATTTCTTTCCTCTCCTTCAAAAATGGCTTTCTCTACCTTCTCCAAAACAACCCTCATCCTCTCTGCCACTTTATTCATCACTTACGGTATCGCTCATGATTTTTCAATCGTAGGCTATTCCCCCGAGCACTTAGCCTCCATGGATAAAACCATCGAGCTGTTTGAGTCATGGATGTCAAAGCACAGTAAAACGTATCGGAGTGTTGAAGAGAAACTCCATAGATTTGAGATATTCCTCGACAATTTGAAGCACATTGATGAAACAAACAAGAAGGTTTCTAGCTATTGGCTGGGGTTGAATGAATTTGCAGACCTGAGCCATGAAGAATTCAAGAGTAAATATTTGGGATTGAGAGTTGAGTTTCCGAGGAAACGATCGTCTCGTGGGTTTAGCTATAGAGATGTGGAGGACTTGCCCGAGTCGGTTGATTGGAGAACTAAAGGAGCTGTTACTCCTGTCAAGAACCAAGGCTCTTGCGGGAGTTGCTGGGCATTTTCAACCGTTGCGGCTGTGGAGGGGATAAACCAAATTGTCACTGGAAATCTAACCTCCTTGTCCGAACAAGAATTGATCGATTGTGACCGAAGCTTCAACAACGGGTGCTACGGTGGTTTGATGGATTATGCCTTCCAATACATAATGTCGAATTCCGGACTTCGAAAGGAAGAAGACTACCCATATCTAATGGAGGAAGGAAGATGTATCAGAGAAAAGGAACAATTTGAGGTAGTGACCATTAGCGGTTACGAAGATGTGCCAGCAAACGATGAACAGAGTCTCCTAAAAGCATTGAGTCACCAACCTGTCAGTGTAGCCATTGAAGCTTCTGGTAGAAATTTCCAATTCTACAAAGGGGGAATATTCACAGGCCGTTGTGGAACCGAAATGGATCATGGCGTGACAGCCGTTGGGTATGGTTCATCAGAGGGAACAGACTACATTATAGTAAAGAACTCATGGGGACCAAAATGGGGAGAAAATGGATATATTAGGATGAAGAGAAATACAGGAAAACCTGAAGGACTATGTGGAATCAACCAAATGGCTTCTTATCCAACCAAAGAGAAATAATCCAATGAAGTTAGCCCTCTAGTCTCTATGATTGTCATATTCTTTTTTTCTTCCCACCAATTTCCTTTCAAATCGATATGAAAGGCAACTTTTATTACCTTTTAACAATAAAAGGACCAAATTTGTAATGGTTTGACATGAAATAAATTGCTACTCCTTTTAGAATATTGCATCTTATTACCAGAAAGGTTTTTTTTCTTAAAAGAACCCTTCCCAAGTGGCCCAAAGAATGGCAACACTAAATGAAGAAAGGGTAGCATAACGACAAAAAGAAAGAACAAAAATTCTAGGTTTCACATAATAGAAAATGTGGGGAAATTACTCGCTGCAGTATGTCAACAATTCTCCAG

Coding sequence (CDS)

ATGGCTTTCTCTACCTTCTCCAAAACAACCCTCATCCTCTCTGCCACTTTATTCATCACTTACGGTATCGCTCATGATTTTTCAATCGTAGGCTATTCCCCCGAGCACTTAGCCTCCATGGATAAAACCATCGAGCTGTTTGAGTCATGGATGTCAAAGCACAGTAAAACGTATCGGAGTGTTGAAGAGAAACTCCATAGATTTGAGATATTCCTCGACAATTTGAAGCACATTGATGAAACAAACAAGAAGGTTTCTAGCTATTGGCTGGGGTTGAATGAATTTGCAGACCTGAGCCATGAAGAATTCAAGAGTAAATATTTGGGATTGAGAGTTGAGTTTCCGAGGAAACGATCGTCTCGTGGGTTTAGCTATAGAGATGTGGAGGACTTGCCCGAGTCGGTTGATTGGAGAACTAAAGGAGCTGTTACTCCTGTCAAGAACCAAGGCTCTTGCGGGAGTTGCTGGGCATTTTCAACCGTTGCGGCTGTGGAGGGGATAAACCAAATTGTCACTGGAAATCTAACCTCCTTGTCCGAACAAGAATTGATCGATTGTGACCGAAGCTTCAACAACGGGTGCTACGGTGGTTTGATGGATTATGCCTTCCAATACATAATGTCGAATTCCGGACTTCGAAAGGAAGAAGACTACCCATATCTAATGGAGGAAGGAAGATGTATCAGAGAAAAGGAACAATTTGAGGTAGTGACCATTAGCGGTTACGAAGATGTGCCAGCAAACGATGAACAGAGTCTCCTAAAAGCATTGAGTCACCAACCTGTCAGTGTAGCCATTGAAGCTTCTGGTAGAAATTTCCAATTCTACAAAGGGGGAATATTCACAGGCCGTTGTGGAACCGAAATGGATCATGGCGTGACAGCCGTTGGGTATGGTTCATCAGAGGGAACAGACTACATTATAGTAAAGAACTCATGGGGACCAAAATGGGGAGAAAATGGATATATTAGGATGAAGAGAAATACAGGAAAACCTGAAGGACTATGTGGAATCAACCAAATGGCTTCTTATCCAACCAAAGAGAAATAA

Protein sequence

MAFSTFSKTTLILSATLFITYGIAHDFSIVGYSPEHLASMDKTIELFESWMSKHSKTYRSVEEKLHRFEIFLDNLKHIDETNKKVSSYWLGLNEFADLSHEEFKSKYLGLRVEFPRKRSSRGFSYRDVEDLPESVDWRTKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDRSFNNGCYGGLMDYAFQYIMSNSGLRKEEDYPYLMEEGRCIREKEQFEVVTISGYEDVPANDEQSLLKALSHQPVSVAIEASGRNFQFYKGGIFTGRCGTEMDHGVTAVGYGSSEGTDYIIVKNSWGPKWGENGYIRMKRNTGKPEGLCGINQMASYPTKEK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008451198.15.7e-202100.00PREDICTED: xylem cysteine proteinase 1-like [Cucumis melo] >KAA0059602.1 xylem c... [more]
XP_004153272.17.2e-19797.42cysteine protease XCP1 [Cucumis sativus] >KGN43363.1 hypothetical protein Csa_02... [more]
XP_038888276.13.0e-19596.00cysteine protease XCP1-like [Benincasa hispida][more]
KAG6589062.15.3e-19295.11Cysteine protease XCP1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022928422.12.6e-19194.54cysteine protease XCP1-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
O654933.3e-15272.68Cysteine protease XCP1 OS=Arabidopsis thaliana OX=3702 GN=XCP1 PE=1 SV=1[more]
Q9LM662.9e-14873.16Cysteine protease XCP2 OS=Arabidopsis thaliana OX=3702 GN=XCP2 PE=1 SV=2[more]
P140801.1e-10452.99Chymopapain OS=Carica papaya OX=3649 PE=1 SV=2[more]
P059943.7e-10354.49Papaya proteinase 4 OS=Carica papaya OX=3649 PE=1 SV=3[more]
Q9FMH81.8e-10254.19Probable cysteine protease RD21B OS=Arabidopsis thaliana OX=3702 GN=RD21B PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A5A7UUL92.8e-202100.00Xylem cysteine proteinase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3BQC22.8e-202100.00xylem cysteine proteinase 1-like OS=Cucumis melo OX=3656 GN=LOC103492568 PE=3 SV... [more]
A0A0A0K1M43.5e-19797.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G027790 PE=3 SV=1[more]
A0A6J1EJW11.3e-19194.54cysteine protease XCP1-like OS=Cucurbita moschata OX=3662 GN=LOC111435238 PE=3 S... [more]
A0A6J1JFT71.9e-19093.97cysteine protease XCP1-like OS=Cucurbita maxima OX=3661 GN=LOC111486488 PE=3 SV=... [more]
Match NameE-valueIdentityDescription
AT4G35350.12.3e-15372.68xylem cysteine peptidase 1 [more]
AT1G20850.12.0e-14973.16xylem cysteine peptidase 2 [more]
AT4G35350.21.8e-11370.77xylem cysteine peptidase 1 [more]
AT5G43060.11.3e-10354.19Granulin repeat cysteine protease family protein [more]
AT1G47128.11.7e-10352.42Granulin repeat cysteine protease family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000668Peptidase C1A, papain C-terminalPRINTSPR00705PAPAINcoord: 291..301
score: 55.83
coord: 306..312
score: 65.58
coord: 149..164
score: 66.54
IPR000668Peptidase C1A, papain C-terminalSMARTSM00645pept_c1coord: 131..346
e-value: 2.0E-122
score: 422.7
IPR000668Peptidase C1A, papain C-terminalPFAMPF00112Peptidase_C1coord: 131..346
e-value: 1.4E-81
score: 273.8
IPR013201Cathepsin propeptide inhibitor domain (I29)SMARTSM00848Inhibitor_I29_2coord: 47..103
e-value: 4.3E-27
score: 106.0
IPR013201Cathepsin propeptide inhibitor domain (I29)PFAMPF08246Inhibitor_I29coord: 47..103
e-value: 6.8E-20
score: 71.3
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 26..348
e-value: 1.5E-123
score: 414.4
NoneNo IPR availablePANTHERPTHR12411:SF725CYSTEINE PROTEASE XCP1-LIKEcoord: 24..347
NoneNo IPR availablePANTHERPTHR12411CYSTEINE PROTEASE FAMILY C1-RELATEDcoord: 24..347
IPR025660Cysteine peptidase, histidine active sitePROSITEPS00639THIOL_PROTEASE_HIScoord: 289..299
IPR025661Cysteine peptidase, asparagine active sitePROSITEPS00640THIOL_PROTEASE_ASNcoord: 306..325
IPR000169Cysteine peptidase, cysteine active sitePROSITEPS00139THIOL_PROTEASE_CYScoord: 149..160
IPR039417Papain-like cysteine endopeptidaseCDDcd02248Peptidase_C1Acoord: 132..345
e-value: 7.38659E-116
score: 332.666
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 43..346

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015701.1MELO3C015701.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity