MELO3C015662.jh1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO3C015662.jh1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr02: 4433322 .. 4433501 (+)
RNA-Seq ExpressionMELO3C015662.jh1
SyntenyMELO3C015662.jh1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGCTCAAAGAAAATCAAATAGTAGCTGTCAGGAGTTCAACATGGACTGTAGCTAGTATAATTATAGAGACAGATGCAAAATGTGCAAAGAGGAAAGTTGAACATTATTACGAGCTGCGTCGAGAAAAATACAAGCTTGCTTTAAACAAAAACAACTCTTACTCTGGTGATTCA

mRNA sequence

ATGGAGGAGCTCAAAGAAAATCAAATAGTAGCTGTCAGGAGTTCAACATGGACTGTAGCTAGTATAATTATAGAGACAGATGCAAAATGTGCAAAGAGGAAAGTTGAACATTATTACGAGCTGCGTCGAGAAAAATACAAGCTTGCTTTAAACAAAAACAACTCTTACTCTGGTGATTCA

Coding sequence (CDS)

ATGGAGGAGCTCAAAGAAAATCAAATAGTAGCTGTCAGGAGTTCAACATGGACTGTAGCTAGTATAATTATAGAGACAGATGCAAAATGTGCAAAGAGGAAAGTTGAACATTATTACGAGCTGCGTCGAGAAAAATACAAGCTTGCTTTAAACAAAAACAACTCTTACTCTGGTGATTCA

Protein sequence

MEELKENQIVAVRSSTWTVASIIIETDAKCAKRKVEHYYELRREKYKLALNKNNSYSGDS
Homology
BLAST of MELO3C015662.jh1 vs. NCBI nr
Match: TYK22029.1 (uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 3.59e-09
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0

Query: 18 TVASIIIETDAKCAKRKVEHYYELRREKYKLALNKNNSYSGDS 60
          TVAS+II T A+CAKRKVEHYY+ RREKY++A N+NN YS  S
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGS 44

BLAST of MELO3C015662.jh1 vs. NCBI nr
Match: KAA0032933.1 (uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 3.82e-09
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0

Query: 18 TVASIIIETDAKCAKRKVEHYYELRREKYKLALNKNNSYSGDS 60
          TVAS+II T A+CAKRKVEHYY+ RREKY++A N+NN YS  S
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGS 44

BLAST of MELO3C015662.jh1 vs. NCBI nr
Match: KAA0045599.1 (hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 6.24e-08
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0

Query: 18 TVASIIIETDAKCAKRKVEHYYELRREKYKLALNKNNSYSGDS 60
          TVAS+IIET A+CAKR+VEHYYE RR K+++A N+NN  S  S
Sbjct: 51 TVASMIIETWARCAKREVEHYYEHRRRKFEVASNRNNLCSSGS 93

BLAST of MELO3C015662.jh1 vs. NCBI nr
Match: TYK05364.1 (hypothetical protein E5676_scaffold83G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 52.4 bits (124), Expect = 1.75e-06
Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 0

Query: 22 IIIETDAKCAKRKVEHYYELRREKYKLALNKNNSYSG 58
          +II  DA+CAKR+V HYYELR+EK+++A N+NN YSG
Sbjct: 56 MIIGIDAECAKREVGHYYELRQEKHEVASNRNNPYSG 92

BLAST of MELO3C015662.jh1 vs. NCBI nr
Match: KAA0037849.1 (uncharacterized protein E6C27_scaffold113G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 46.2 bits (108), Expect = 2.35e-04
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 0

Query: 26 TDAKCAKRKVEHYYELRREKYKLALNKNNSYSGDS 60
          T  +CAKR+VEHYYEL R+K+++A NKNN YS  S
Sbjct: 50 TWVECAKREVEHYYELCRKKHEVASNKNNPYSSGS 84

BLAST of MELO3C015662.jh1 vs. ExPASy TrEMBL
Match: A0A5D3DFG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold482G00720 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.74e-09
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0

Query: 18 TVASIIIETDAKCAKRKVEHYYELRREKYKLALNKNNSYSGDS 60
          TVAS+II T A+CAKRKVEHYY+ RREKY++A N+NN YS  S
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGS 44

BLAST of MELO3C015662.jh1 vs. ExPASy TrEMBL
Match: A0A5A7SR74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G00040 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.85e-09
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0

Query: 18 TVASIIIETDAKCAKRKVEHYYELRREKYKLALNKNNSYSGDS 60
          TVAS+II T A+CAKRKVEHYY+ RREKY++A N+NN YS  S
Sbjct: 2  TVASMIIGTWAECAKRKVEHYYKARREKYEVASNRNNLYSSGS 44

BLAST of MELO3C015662.jh1 vs. ExPASy TrEMBL
Match: A0A5A7TWH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001050 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.02e-08
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0

Query: 18 TVASIIIETDAKCAKRKVEHYYELRREKYKLALNKNNSYSGDS 60
          TVAS+IIET A+CAKR+VEHYYE RR K+++A N+NN  S  S
Sbjct: 51 TVASMIIETWARCAKREVEHYYEHRRRKFEVASNRNNLCSSGS 93

BLAST of MELO3C015662.jh1 vs. ExPASy TrEMBL
Match: A0A5D3C253 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00340 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.48e-07
Identity = 24/37 (64.86%), Postives = 32/37 (86.49%), Query Frame = 0

Query: 22 IIIETDAKCAKRKVEHYYELRREKYKLALNKNNSYSG 58
          +II  DA+CAKR+V HYYELR+EK+++A N+NN YSG
Sbjct: 56 MIIGIDAECAKREVGHYYELRQEKHEVASNRNNPYSG 92

BLAST of MELO3C015662.jh1 vs. ExPASy TrEMBL
Match: A0A5A7T963 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold113G00420 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.14e-04
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 0

Query: 26 TDAKCAKRKVEHYYELRREKYKLALNKNNSYSGDS 60
          T  +CAKR+VEHYYEL R+K+++A NKNN YS  S
Sbjct: 50 TWVECAKREVEHYYELCRKKHEVASNKNNPYSSGS 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK22029.13.59e-0969.77uncharacterized protein E5676_scaffold482G00720 [Cucumis melo var. makuwa][more]
KAA0032933.13.82e-0969.77uncharacterized protein E6C27_scaffold269G00040 [Cucumis melo var. makuwa][more]
KAA0045599.16.24e-0865.12hypothetical protein E6C27_scaffold243G001050 [Cucumis melo var. makuwa][more]
TYK05364.11.75e-0664.86hypothetical protein E5676_scaffold83G00340 [Cucumis melo var. makuwa][more]
KAA0037849.12.35e-0462.86uncharacterized protein E6C27_scaffold113G00420 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DFG81.74e-0969.77Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SR741.85e-0969.77Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TWH63.02e-0865.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C2538.48e-0764.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T9631.14e-0462.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C015662.jh1.t1MELO3C015662.jh1.t1mRNA