MELO3C015637 (gene) Melon (DHL92) v4

Overview


Name	MELO3C015637
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Gag/pol protein
Location	chr02: 3741391 .. 3741719 (-)
RNA-Seq Expression	MELO3C015637
Synteny	MELO3C015637

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTTCCGAGAAAAATGTGAAATTAGACGGATCTCTGAATCTCGCGTCGGAAATGAACCGGAAGATTTAGAGAAAGATGAAAAGGACAACGATGGAAGAGATAGAGATGTGGTTTATGCGTCGTCTTCCATGCCCTCGCCGCCAAAAAATGCTTTCATTCTGACAAGATGTAGATTTACACCAAATCGTTCGTCGTTTAACGATAACCGATACCAGAGTTCTTTGATTACAAGTGACGGAACTATTGAAGAAGAAGAGAAAATAGAGAGCGGAGGTGATTCGACCCTAAACCCTAAAGTGAGATTGAGAAGAGAGGGAAGAAAGAC

mRNA sequence

ATGCTCTTCCGAGAAAAATGTGAAATTAGACGGATCTCTGAATCTCGCGTCGGAAATGAACCGGAAGATTTAGAGAAAGATGAAAAGGACAACGATGGAAGAGATAGAGATGTGGTTTATGCGTCGTCTTCCATGCCCTCGCCGCCAAAAAATGCTTTCATTCTGACAAGATGTAGATTTACACCAAATCGTTCGTCGTTTAACGATAACCGATACCAGAGTTCTTTGATTACAAGTGACGGAACTATTGAAGAAGAAGAGAAAATAGAGAGCGGAGGTGATTCGACCCTAAACCCTAAAGTGAGATTGAGAAGAGAGGGAAGAAAGAC

Coding sequence (CDS)

ATGCTCTTCCGAGAAAAATGTGAAATTAGACGGATCTCTGAATCTCGCGTCGGAAATGAACCGGAAGATTTAGAGAAAGATGAAAAGGACAACGATGGAAGAGATAGAGATGTGGTTTATGCGTCGTCTTCCATGCCCTCGCCGCCAAAAAATGCTTTCATTCTGACAAGATGTAGATTTACACCAAATCGTTCGTCGTTTAACGATAACCGATACCAGAGTTCTTTGATTACAAGTGACGGAACTATTGAAGAAGAAGAGAAAATAGAGAGCGGAGGTGATTCGACCCTAAACCCTAAAGTGAGATTGAGAAGAGAGGGAAGAAAG

Protein sequence

MLFREKCEIRRISESRVGNEPEDLEKDEKDNDGRDRDVVYASSSMPSPPKNAFILTRCRFTPNRSSFNDNRYQSSLITSDGTIEEEEKIESGGDSTLNPKVRLRREGRK

Homology

[Close]

BLAST of MELO3C015637 vs. NCBI nr
Match: KAA0039548.1 (uncharacterized protein E6C27_scaffold744G00170 [Cucumis melo var. makuwa] >TYK01752.1 uncharacterized protein E5676_scaffold775G00820 [Cucumis melo var. makuwa])

HSP 1 Score: 153.3 bits (386), Expect = 1.2e-33
Identity = 85/109 (77.98%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 1   MLFREKCEIRRISESRVGNEPEDLEKDEKDNDGRDRDVVYASSSMPSPPKNAFILTRCRF 60
           MLF+ KCEIRR S+S + NE ED EKDEKDNDGR+RDVVYASSSMPSP KN  I T    
Sbjct: 1   MLFQGKCEIRRTSKSHIENEVEDSEKDEKDNDGRNRDVVYASSSMPSPQKNTLIPT---- 60

Query: 61  TPNRSSFNDNRYQSSLITSDGTIEEEEKIESGGDSTLNPKVRLRREGRK 110
             +RSSFN+NRYQSS ITSD TIEEEEKIESGGDSTLNPKVRLRREGRK
Sbjct: 61  --SRSSFNNNRYQSSSITSDITIEEEEKIESGGDSTLNPKVRLRREGRK 103

[Close]

BLAST of MELO3C015637 vs. NCBI nr
Match: KAA0054315.1 (uncharacterized protein E6C27_scaffold24G00360 [Cucumis melo var. makuwa] >TYK12351.1 uncharacterized protein E5676_scaffold302G001280 [Cucumis melo var. makuwa])

HSP 1 Score: 152.5 bits (384), Expect = 2.1e-33
Identity = 80/90 (88.89%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 1  MLFREKCEIRRISESRVGNEPEDLEKDEKDNDGRDRDVVYASSSMPSPPKNAFILTRCRF 60
          MLFR KCEIR ISESRVGNE ED EKDEKDNDGRDRDVVYASSSMPS PKNA I TRCRF
Sbjct: 1  MLFRGKCEIRWISESRVGNEAEDSEKDEKDNDGRDRDVVYASSSMPSSPKNALISTRCRF 60

Query: 61 TPNRSSFNDNRYQSSLITSDGTIEEEEKIE 91
          TPN SSFNDNRYQSS ITSD TIEEEEKIE
Sbjct: 61 TPNHSSFNDNRYQSSSITSDRTIEEEEKIE 90

[Close]

BLAST of MELO3C015637 vs. NCBI nr
Match: KAA0061741.1 (uncharacterized protein E6C27_scaffold212G001160 [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 7.8e-33
Identity = 79/90 (87.78%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 1  MLFREKCEIRRISESRVGNEPEDLEKDEKDNDGRDRDVVYASSSMPSPPKNAFILTRCRF 60
          MLFR KCEIR IS+SRVGNE ED EKDEKDNDGRDRDVVYASSSMPS PKNA I TRCRF
Sbjct: 1  MLFRGKCEIRWISKSRVGNEAEDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRF 60

Query: 61 TPNRSSFNDNRYQSSLITSDGTIEEEEKIE 91
          TPN SSFNDNRYQSS ITSD TIEEEEKIE
Sbjct: 61 TPNHSSFNDNRYQSSSITSDRTIEEEEKIE 90

[Close]

BLAST of MELO3C015637 vs. NCBI nr
Match: KAA0039167.1 (uncharacterized protein E6C27_scaffold121G00700 [Cucumis melo var. makuwa] >KAA0052049.1 uncharacterized protein E6C27_scaffold578G00120 [Cucumis melo var. makuwa] >KAA0061151.1 uncharacterized protein E6C27_scaffold753G00180 [Cucumis melo var. makuwa] >TYK05359.1 uncharacterized protein E5676_scaffold83G00280 [Cucumis melo var. makuwa] >TYK12370.1 uncharacterized protein E5676_scaffold302G001500 [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 7.8e-33
Identity = 79/90 (87.78%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 1  MLFREKCEIRRISESRVGNEPEDLEKDEKDNDGRDRDVVYASSSMPSPPKNAFILTRCRF 60
          MLFR KCEIR ISESRVGNE ED EKDEKDNDGRDRDVVYASSSMPS PKNA I TRCRF
Sbjct: 1  MLFRGKCEIRWISESRVGNEAEDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRF 60

Query: 61 TPNRSSFNDNRYQSSLITSDGTIEEEEKIE 91
          TPN SSFN+NRYQSS ITSD TIEEEEKIE
Sbjct: 61 TPNHSSFNENRYQSSSITSDRTIEEEEKIE 90

[Close]

BLAST of MELO3C015637 vs. NCBI nr
Match: XP_008449922.1 (PREDICTED: uncharacterized protein LOC103491651 [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32
Identity = 81/109 (74.31%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 1   MLFREKCEIRRISESRVGNEPEDLEKDEKDNDGRDRDVVYASSSMPSPPKNAFILTRCRF 60
           MLFR K EIRRISESRVGNE ED EKDE+D+DGRDRD VYASSS+PSPPKNA ILTRCR 
Sbjct: 106 MLFRGKREIRRISESRVGNEAEDSEKDEEDDDGRDRDAVYASSSVPSPPKNALILTRCRS 165

Query: 61  TPNRSSFNDNRYQSSLITSDG-TIEEEEKIESGGDSTLNPKVRLRREGR 109
           TPNRSSFNDNRY+SS ITSDG T+EEEEK E G  +    K+ LR   R
Sbjct: 166 TPNRSSFNDNRYRSSSITSDGSTVEEEEKTERGFGNNTASKIELRNSER 214

[Close]

BLAST of MELO3C015637 vs. ExPASy TrEMBL
Match: A0A5D3BSH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold775G00820 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.9e-34
Identity = 85/109 (77.98%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 1   MLFREKCEIRRISESRVGNEPEDLEKDEKDNDGRDRDVVYASSSMPSPPKNAFILTRCRF 60
           MLF+ KCEIRR S+S + NE ED EKDEKDNDGR+RDVVYASSSMPSP KN  I T    
Sbjct: 1   MLFQGKCEIRRTSKSHIENEVEDSEKDEKDNDGRNRDVVYASSSMPSPQKNTLIPT---- 60

Query: 61  TPNRSSFNDNRYQSSLITSDGTIEEEEKIESGGDSTLNPKVRLRREGRK 110
             +RSSFN+NRYQSS ITSD TIEEEEKIESGGDSTLNPKVRLRREGRK
Sbjct: 61  --SRSSFNNNRYQSSSITSDITIEEEEKIESGGDSTLNPKVRLRREGRK 103

[Close]

BLAST of MELO3C015637 vs. ExPASy TrEMBL
Match: A0A5A7UKV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001280 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-33
Identity = 80/90 (88.89%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 1  MLFREKCEIRRISESRVGNEPEDLEKDEKDNDGRDRDVVYASSSMPSPPKNAFILTRCRF 60
          MLFR KCEIR ISESRVGNE ED EKDEKDNDGRDRDVVYASSSMPS PKNA I TRCRF
Sbjct: 1  MLFRGKCEIRWISESRVGNEAEDSEKDEKDNDGRDRDVVYASSSMPSSPKNALISTRCRF 60

Query: 61 TPNRSSFNDNRYQSSLITSDGTIEEEEKIE 91
          TPN SSFNDNRYQSS ITSD TIEEEEKIE
Sbjct: 61 TPNHSSFNDNRYQSSSITSDRTIEEEEKIE 90

[Close]

BLAST of MELO3C015637 vs. ExPASy TrEMBL
Match: A0A5D3DUF5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001500 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.8e-33
Identity = 79/90 (87.78%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 1  MLFREKCEIRRISESRVGNEPEDLEKDEKDNDGRDRDVVYASSSMPSPPKNAFILTRCRF 60
          MLFR KCEIR ISESRVGNE ED EKDEKDNDGRDRDVVYASSSMPS PKNA I TRCRF
Sbjct: 1  MLFRGKCEIRWISESRVGNEAEDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRF 60

Query: 61 TPNRSSFNDNRYQSSLITSDGTIEEEEKIE 91
          TPN SSFN+NRYQSS ITSD TIEEEEKIE
Sbjct: 61 TPNHSSFNENRYQSSSITSDRTIEEEEKIE 90

[Close]

BLAST of MELO3C015637 vs. ExPASy TrEMBL
Match: A0A5A7V7N3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001160 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.8e-33
Identity = 79/90 (87.78%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 1  MLFREKCEIRRISESRVGNEPEDLEKDEKDNDGRDRDVVYASSSMPSPPKNAFILTRCRF 60
          MLFR KCEIR IS+SRVGNE ED EKDEKDNDGRDRDVVYASSSMPS PKNA I TRCRF
Sbjct: 1  MLFRGKCEIRWISKSRVGNEAEDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRF 60

Query: 61 TPNRSSFNDNRYQSSLITSDGTIEEEEKIE 91
          TPN SSFNDNRYQSS ITSD TIEEEEKIE
Sbjct: 61 TPNHSSFNDNRYQSSSITSDRTIEEEEKIE 90

[Close]

BLAST of MELO3C015637 vs. ExPASy TrEMBL
Match: A0A5A7TVU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00730 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 81/109 (74.31%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 1   MLFREKCEIRRISESRVGNEPEDLEKDEKDNDGRDRDVVYASSSMPSPPKNAFILTRCRF 60
           MLFR K EIRRISESRVGNE ED EKDE+D+DGRDRD VYASSS+PSPPKNA ILTRCR 
Sbjct: 106 MLFRGKREIRRISESRVGNEAEDSEKDEEDDDGRDRDAVYASSSVPSPPKNALILTRCRS 165

Query: 61  TPNRSSFNDNRYQSSLITSDG-TIEEEEKIESGGDSTLNPKVRLRREGR 109
           TPNRSSFNDNRY+SS ITSDG T+EEEEK E G  +    K+ LR   R
Sbjct: 166 TPNRSSFNDNRYRSSSITSDGSTVEEEEKTERGFGNNTASKIELRNSER 214

The following BLAST results are available for this feature:

BLAST of MELO3C015637 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039548.1	1.2e-33	77.98	uncharacterized protein E6C27_scaffold744G00170 [Cucumis melo var. makuwa] >TYK0...	[more]
KAA0054315.1	2.1e-33	88.89	uncharacterized protein E6C27_scaffold24G00360 [Cucumis melo var. makuwa] >TYK12...	[more]
KAA0061741.1	7.8e-33	87.78	uncharacterized protein E6C27_scaffold212G001160 [Cucumis melo var. makuwa]	[more]
KAA0039167.1	7.8e-33	87.78	uncharacterized protein E6C27_scaffold121G00700 [Cucumis melo var. makuwa] >KAA0...	[more]
XP_008449922.1	3.0e-32	74.31	PREDICTED: uncharacterized protein LOC103491651 [Cucumis melo]	[more]

BLAST of MELO3C015637 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C015637 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BSH6	5.9e-34	77.98	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UKV8	1.0e-33	88.89	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DUF5	3.8e-33	87.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V7N3	3.8e-33	87.78	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TVU1	1.4e-32	74.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C015637 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015637.1	MELO3C015637.1	mRNA