MELO3C015277.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C015277.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	GATA transcription factor 16-like
Location	chr02: 654128 .. 655735 (-)
RNA-Seq Expression	MELO3C015277.jh1
Synteny	MELO3C015277.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTTAACCCCATTTCTCCATTACTAGGGTTTTACAGTACCGCCTAGGGTTTCTCCATCATCTTCATTCTTATCTCTTTCTCTCTCTCTTTCTCTCTTTCACTCTTTCAGTCGGTTCTGCTCTCTGTTTTTTTTTTTTCTCTTTTTCTTTTCAGTAATGATCTTATGTTCTCCCCTTCTCTCTCTCCCTCGTTCAATTTTCTTCCTAAATCCTGAAATGGGTTTCGTGGATTTAAGCCAAAAGGTCAGTTTTTCATATCCCTTTTCACACGAATCTTTGTTTTTTTTTTTACTGATTTTTGTTAGTTCGAATTCCTCTGTTTTAGGGACTTTTGCTGGCGGATACTAAATGTTGTGTTGATTGTAAGACTACCAAAACTCCTTTGTGGCGTGGAGGCCCTACTGGACCCAAGGTTCTTCCCTTTCTTTATCGTTTCGTTCCTTTTTTTTTTTTTCTTTCCTGTTTGTCTTTTGATTTTCTGGGTTGTTTTTGTTGAGAAGATTTGCCTTCTCCATTCCTTCTTCACTCTGTTCTATTGTTTTCTTGTTTCATGTTTTCCATTTTGCTTTTGTTTGGTCTTGAGCTTATGAGTTTTGATTCATGATCTATTTACGGTTTATAATTTTCCCTTGAAACATACTGTGTTTCTACTGTTTGATTTCGAGCTTTTTTTTTTTAGGATCATGTTCTGTTTTGGCACTAATTTCACTAGAATTTTGTGTTTCTTCTTTGTTCATGAAGTTGATCATTCTTTTCGTTTATGTTCTATTTCTAATGAGCTTCTCCTGTTTTCGATTAGATGATGAGATTTTCCCTTTCATTTTCTTTGTGTGATCTTAAGCCTCTGATTTGGTTTCACTTTCACATTCTTTTGTTCTGTTTTCATTTCTTGTTGAAATAGGAAATCTTCATATCATCAATTAAACAAACCTCTCTTCCCATTTGGGGATTCTTGCAGTCACTGTGTAATGCATGCGGTATTAGGTTTAGAAAGAGAAAAATATTCACCAGAAGAACGAACAGAGGAGGACGTGACAAGAAGAGGGAAAGAGTTCACGACAATCACTCCTCCACCGTTGCCATCGTGTCAGCCACCACTACTTCCTCGAGTGGGACGACCATCACCACCACCACCACCACCTCTGGCGTGGATGGGGATGAGAATTCAGGGGAGTGTGGGTCATCGAGAATGAAAATAATGATGGGATTGGAGGAGGATGTGATGGTGGTGAAGAAACACCGATGGCAATGGCAGAGGAAGGTCGGGGAGGAGGAAAAGCAAGCAGCGGTGTCGTTAATGGCGCTGTCGAATGGCTCGCTGATTTCCTGAGGAAGAAGAAGGTACAGAATTAGGATTCAGTATTATACTCATCAAAGTTCTAACCTATAATACTAATTACCAACCAGAACATCACTTTGTTTTTTGTTCAAAATTAATGAAATTGGAAGAAGACTAGTAATTGGGTTTCTTTCCAAAAAAAAAATGGTAGTTTTAGCATTTAGGCAATGAAGAAGAAGGACATGGGGGAATTCAAAATGATATTTTGTGTAGTTGTAGTGTTGTTTCATGTGTACCTATCCCAAATAAAGGATTACAGATTAACCCTT

mRNA sequence

TCCTTAACCCCATTTCTCCATTACTAGGGTTTTACAGTACCGCCTAGGGTTTCTCCATCATCTTCATTCTTATCTCTTTCTCTCTCTCTTTCTCTCTTTCACTCTTTCAGTCGGTTCTGCTCTCTGTTTTTTTTTTTTCTCTTTTTCTTTTCAGTAATGATCTTATGTTCTCCCCTTCTCTCTCTCCCTCGTTCAATTTTCTTCCTAAATCCTGAAATGGGTTTCGTGGATTTAAGCCAAAAGGGACTTTTGCTGGCGGATACTAAATGTTGTGTTGATTGTAAGACTACCAAAACTCCTTTGTGGCGTGGAGGCCCTACTGGACCCAAGTCACTGTGTAATGCATGCGGTATTAGGTTTAGAAAGAGAAAAATATTCACCAGAAGAACGAACAGAGGAGGACGTGACAAGAAGAGGGAAAGAGTTCACGACAATCACTCCTCCACCGTTGCCATCGTGTCAGCCACCACTACTTCCTCGAGTGGGACGACCATCACCACCACCACCACCACCTCTGGCGTGGATGGGGATGAGAATTCAGGGGAGTGTGGGTCATCGAGAATGAAAATAATGATGGGATTGGAGGAGGATGTGATGGTGGTGAAGAAACACCGATGGCAATGGCAGAGGAAGGTCGGGGAGGAGGAAAAGCAAGCAGCGGTGTCGTTAATGGCGCTGTCGAATGGCTCGCTGATTTCCTGAGGAAGAAGAAGGTACAGAATTAGGATTCAGTATTATACTCATCAAAGTTCTAACCTATAATACTAATTACCAACCAGAACATCACTTTGTTTTTTGTTCAAAATTAATGAAATTGGAAGAAGACTAGTAATTGGGTTTCTTTCCAAAAAAAAAATGGTAGTTTTAGCATTTAGGCAATGAAGAAGAAGGACATGGGGGAATTCAAAATGATATTTTGTGTAGTTGTAGTGTTGTTTCATGTGTACCTATCCCAAATAAAGGATTACAGATTAACCCTT

Coding sequence (CDS)

ATGATCTTATGTTCTCCCCTTCTCTCTCTCCCTCGTTCAATTTTCTTCCTAAATCCTGAAATGGGTTTCGTGGATTTAAGCCAAAAGGGACTTTTGCTGGCGGATACTAAATGTTGTGTTGATTGTAAGACTACCAAAACTCCTTTGTGGCGTGGAGGCCCTACTGGACCCAAGTCACTGTGTAATGCATGCGGTATTAGGTTTAGAAAGAGAAAAATATTCACCAGAAGAACGAACAGAGGAGGACGTGACAAGAAGAGGGAAAGAGTTCACGACAATCACTCCTCCACCGTTGCCATCGTGTCAGCCACCACTACTTCCTCGAGTGGGACGACCATCACCACCACCACCACCACCTCTGGCGTGGATGGGGATGAGAATTCAGGGGAGTGTGGGTCATCGAGAATGAAAATAATGATGGGATTGGAGGAGGATGTGATGGTGGTGAAGAAACACCGATGGCAATGGCAGAGGAAGGTCGGGGAGGAGGAAAAGCAAGCAGCGGTGTCGTTAATGGCGCTGTCGAATGGCTCGCTGATTTCCTGA

Protein sequence

MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIFTRRTNRGGRDKKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTSGVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS

Homology

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BLAST of MELO3C015277.jh1 vs. NCBI nr
Match: XP_008450587.1 (PREDICTED: GATA transcription factor 16-like [Cucumis melo])

HSP 1 Score: 341 bits (875), Expect = 6.27e-118
Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60
           MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL
Sbjct: 1   MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60

Query: 61  CNACGIRFRKRKIFTRRTNRGGRDKKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTS 120
           CNACGIRFRKRKIFTRRTNRGGRDKKRERV DNHSSTVAIVSATTTSSSGTT TTTTTTS
Sbjct: 61  CNACGIRFRKRKIFTRRTNRGGRDKKRERVRDNHSSTVAIVSATTTSSSGTT-TTTTTTS 120

Query: 121 GVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLI 180
           GVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLI
Sbjct: 121 GVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLI 180

[Close]

BLAST of MELO3C015277.jh1 vs. NCBI nr
Match: TYK10277.1 (GATA transcription factor 16-like [Cucumis melo var. makuwa])

HSP 1 Score: 291 bits (746), Expect = 2.78e-98
Identity = 159/180 (88.33%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 21  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK-------------------SLC 80
           MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK                   SLC
Sbjct: 1   MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKEIFISSIKQTSLPIWGFLQSLC 60

Query: 81  NACGIRFRKRKIFTRRTNRGGRDKKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTSG 140
           NACGIRFRKRKIFTRRTNRGGRDKKRERV DNHSSTVAIVSATTTSSSGTT TTTTTTSG
Sbjct: 61  NACGIRFRKRKIFTRRTNRGGRDKKRERVRDNHSSTVAIVSATTTSSSGTT-TTTTTTSG 120

Query: 141 VDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS 181
           VDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS
Sbjct: 121 VDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS 179

[Close]

BLAST of MELO3C015277.jh1 vs. NCBI nr
Match: XP_011659732.1 (GATA transcription factor 16 [Cucumis sativus] >KGN66031.1 hypothetical protein Csa_006937 [Cucumis sativus])

HSP 1 Score: 267 bits (683), Expect = 5.57e-89
Identity = 140/161 (86.96%), Postives = 151/161 (93.79%), Query Frame = 0


Query: 21  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIFTRRTNR 80
           MGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKR+I TR TNR
Sbjct: 1   MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR 60

Query: 81  GGRDKKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTSGVDGDENSGECGSSRMKIMM 140
             RDKKRE+V+DNHSS VA VSATTTSSSGTTITTTT++SGVDGDENSGECGS RM++MM
Sbjct: 61  --RDKKREKVNDNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMM 120

Query: 141 GLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS 181
            LEEDVMVVKK +WQWQRKVGEEEKQAA+SL+ALSN SLIS
Sbjct: 121 SLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS 159

[Close]

BLAST of MELO3C015277.jh1 vs. NCBI nr
Match: XP_038880207.1 (GATA transcription factor 17-like [Benincasa hispida])

HSP 1 Score: 233 bits (594), Expect = 4.91e-75
Identity = 135/188 (71.81%), Postives = 151/188 (80.32%), Query Frame = 0


Query: 1   MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60
           MIL SP LSLP SI FLN EMG +DL QKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL
Sbjct: 1   MILRSPRLSLPHSICFLNREMGMMDLRQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60

Query: 61  CNACGIRFRKRKIFTRRTNRGGRDKKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTS 120
           CNACGIRFRKR+I T  TNRG  D+KRERVH+N S+    VSATT SS+GTT TTT+ + 
Sbjct: 61  CNACGIRFRKRRISTIGTNRGY-DRKRERVHNNGSTITTTVSATT-SSTGTTTTTTSGSG 120

Query: 121 GVDGDENSGECGSSRMKIMMGLEEDVMVV-------KKHRWQWQRKVGEEEKQAAVSLMA 180
             DGDEN GECGS  M++MM LEE+VMVV       KK R+Q +RK+GEEEKQAAVSLMA
Sbjct: 121 DGDGDENLGECGSLGMRLMMALEEEVMVVQNLPSSVKKQRFQRERKLGEEEKQAAVSLMA 180

[Close]

BLAST of MELO3C015277.jh1 vs. NCBI nr
Match: KAG6588601.1 (GATA transcription factor 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154 bits (388), Expect = 4.48e-44
Identity = 99/168 (58.93%), Postives = 118/168 (70.24%), Query Frame = 0


Query: 21  MGFVDLSQKGLLLAD------TKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIF 80
           MG +D++QKGLLL         KCCVDC TTKTPLWRGGP GPKSLCNACGIRFRKR+I 
Sbjct: 1   MGMMDVTQKGLLLRTQLQDQTNKCCVDCNTTKTPLWRGGPAGPKSLCNACGIRFRKRRIS 60

Query: 81  TRRTNRGGRDKKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTSGV--DGDENSGECG 140
           T R    G  +K+ER H   S+ +  VSATT+SSSGTT   TTT+ G   DG+E+ GEC 
Sbjct: 61  TNR----GYVRKKERPHS--STAMGAVSATTSSSSGTTAINTTTSGGGSGDGEEDLGECR 120

Query: 141 SSRMKIMMGLEEDVMVVKK-HRWQWQRKVGEEEKQAAVSLMALSNGSL 179
           S RM++MM   E+V+VV+     Q Q K+GEEE QAAV LMALS GS+
Sbjct: 121 SLRMRVMMPFREEVVVVQNASSVQKQGKLGEEE-QAAVLLMALSCGSV 161

[Close]

BLAST of MELO3C015277.jh1 vs. ExPASy Swiss-Prot
Match: Q8LC59 (GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 9.1e-13
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 37 KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRK 73
          +CC +CKTTKTP+WRGGPTGPKSLCNACGIR RK++
Sbjct: 26 RCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQR 61

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BLAST of MELO3C015277.jh1 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.5e-12
Identity = 57/143 (39.86%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 37  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIFTRRTNRGGRDKKRERVHDNHSS 96
           K C DC T+KTPLWRGGP GPKSLCNACGIR RK++       RGG +  ++        
Sbjct: 36  KTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKR-------RGGTEDNKK-------- 95

Query: 97  TVAIVSATTTSSSGTTITTTTTTSGVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQW 156
                     SSSG             G+   GE  S +  +M     D+ + K+   + 
Sbjct: 96  -------LKKSSSG------------GGNRKFGE--SLKQSLM-----DLGIRKRSTVEK 137

Query: 157 QRKVGEEEKQAAVSLMALSNGSL 180
           QR+   EE+QAAV LMALS GS+
Sbjct: 156 QRQKLGEEEQAAVLLMALSYGSV 137

[Close]

BLAST of MELO3C015277.jh1 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 5.0e-11
Identity = 51/146 (34.93%), Postives = 68/146 (46.58%), Query Frame = 0


Query: 35  DTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIFTRRTNRGGRDKKRERVHDNH 94
           + K C  C T+KTPLWRGGP GPKSLCNACGIR RK+    RRT    R + +++   N 
Sbjct: 39  EKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKK----RRTLISNRSEDKKKKSHNR 98

Query: 95  SSTVAIVSATTTSSSGTTITTTTTTSGVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRW 154
           +                                  + G S  + +M L  +VM+ +    
Sbjct: 99  NP---------------------------------KFGDSLKQRLMELGREVMMQRSTAE 147

Query: 155 QWQRKVGEEEKQAAVSLMALSNGSLI 181
             +R    EE+QAAV LMALS  S +
Sbjct: 159 NQRRNKLGEEEQAAVLLMALSYASSV 147

[Close]

BLAST of MELO3C015277.jh1 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.2e-10
Identity = 59/161 (36.65%), Postives = 82/161 (50.93%), Query Frame = 0


Query: 35  DTK-CCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIFTRRTNRGGRDKKRERVHDN 94
           DTK  CVDC T +TPLWRGGP GPKSLCNACGI+ RK+    R+   G R +++++   +
Sbjct: 39  DTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKK----RQAALGMRSEEKKKNRKS 98

Query: 95  HSSTVAIVSATTTSSSGTTITTTTTTSGVDGDENSGECGSSRMK-----------IMMGL 154
           + +    +           I        +D D++   C + R             + +G 
Sbjct: 99  NCNNDLNLDHRNAKKYKINI---VDDGKIDIDDDPKICNNKRSSSSSSNKGVSKFLDLGF 158

Query: 155 EEDVM----VVKKHRWQWQRKVGEEEKQAAVSLMALSNGSL 180
           +  VM    V KK  W   RK+GEEE+ AAV LMALS  S+
Sbjct: 159 KVPVMKRSAVEKKRLW---RKLGEEER-AAVLLMALSCSSV 188

[Close]

BLAST of MELO3C015277.jh1 vs. ExPASy Swiss-Prot
Match: Q9SZI6 (Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.0e-08
Identity = 51/154 (33.12%), Postives = 71/154 (46.10%), Query Frame = 0


Query: 37  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIFTRRTNRGG---------RDKKR 96
           + C DC TTKTPLWR GP GPKSLCNACGIR RK +     T               KK 
Sbjct: 199 RICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMATATATAVSGVSPPVMKKKM 258

Query: 97  ERVHDNHSSTVAIVS----ATTTSSSGTTITTTTTTSGVDGDENSGECGSSRMKIMMGLE 156
           +  +   +    I+S       T     T+  T     ++   NS    SS         
Sbjct: 259 QNKNKISNGVYKILSPLPLKVNTCKRMITLEETALAEDLETQSNSTMLSSSDNIYF---- 318

Query: 157 EDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNG 178
           +D+ ++      +Q+   ++EK+AA+ LMALS+G
Sbjct: 319 DDLALLLSKSSAYQQVFPQDEKEAAILLMALSHG 348

[Close]

BLAST of MELO3C015277.jh1 vs. ExPASy TrEMBL
Match: A0A1S3BQ71 (GATA transcription factor 16-like OS=Cucumis melo OX=3656 GN=LOC103492133 PE=4 SV=1)

HSP 1 Score: 341 bits (875), Expect = 3.03e-118
Identity = 179/181 (98.90%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60
           MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL
Sbjct: 1   MILCSPLLSLPRSIFFLNPEMGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSL 60

Query: 61  CNACGIRFRKRKIFTRRTNRGGRDKKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTS 120
           CNACGIRFRKRKIFTRRTNRGGRDKKRERV DNHSSTVAIVSATTTSSSGTT TTTTTTS
Sbjct: 61  CNACGIRFRKRKIFTRRTNRGGRDKKRERVRDNHSSTVAIVSATTTSSSGTT-TTTTTTS 120

Query: 121 GVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLI 180
           GVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLI
Sbjct: 121 GVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLI 180

[Close]

BLAST of MELO3C015277.jh1 vs. ExPASy TrEMBL
Match: A0A5D3CE96 (GATA transcription factor 16-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004280 PE=4 SV=1)

HSP 1 Score: 291 bits (746), Expect = 1.35e-98
Identity = 159/180 (88.33%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 21  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK-------------------SLC 80
           MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPK                   SLC
Sbjct: 1   MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKEIFISSIKQTSLPIWGFLQSLC 60

Query: 81  NACGIRFRKRKIFTRRTNRGGRDKKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTSG 140
           NACGIRFRKRKIFTRRTNRGGRDKKRERV DNHSSTVAIVSATTTSSSGTT TTTTTTSG
Sbjct: 61  NACGIRFRKRKIFTRRTNRGGRDKKRERVRDNHSSTVAIVSATTTSSSGTT-TTTTTTSG 120

Query: 141 VDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS 181
           VDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS
Sbjct: 121 VDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS 179

[Close]

BLAST of MELO3C015277.jh1 vs. ExPASy TrEMBL
Match: A0A0A0M1G9 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569090 PE=4 SV=1)

HSP 1 Score: 267 bits (683), Expect = 2.70e-89
Identity = 140/161 (86.96%), Postives = 151/161 (93.79%), Query Frame = 0


Query: 21  MGFVDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIFTRRTNR 80
           MGF+DLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKR+I TR TNR
Sbjct: 1   MGFMDLSQKGLLLADTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRRISTRGTNR 60

Query: 81  GGRDKKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTSGVDGDENSGECGSSRMKIMM 140
             RDKKRE+V+DNHSS VA VSATTTSSSGTTITTTT++SGVDGDENSGECGS RM++MM
Sbjct: 61  --RDKKREKVNDNHSSAVATVSATTTSSSGTTITTTTSSSGVDGDENSGECGSLRMRLMM 120

Query: 141 GLEEDVMVVKKHRWQWQRKVGEEEKQAAVSLMALSNGSLIS 181
            LEEDVMVVKK +WQWQRKVGEEEKQAA+SL+ALSN SLIS
Sbjct: 121 SLEEDVMVVKKQQWQWQRKVGEEEKQAAMSLIALSNDSLIS 159

[Close]

BLAST of MELO3C015277.jh1 vs. ExPASy TrEMBL
Match: A0A6J1F048 (GATA transcription factor 16-like OS=Cucurbita moschata OX=3662 GN=LOC111437809 PE=4 SV=1)

HSP 1 Score: 150 bits (380), Expect = 3.53e-43
Identity = 98/168 (58.33%), Postives = 118/168 (70.24%), Query Frame = 0


Query: 21  MGFVDLSQKGLLLAD------TKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIF 80
           MG ++++QKGLLL         KCCVDC TTKTPLWRGGP GPKSLCNACGIRFRKR+I 
Sbjct: 1   MGMMEVTQKGLLLRTQLQDQTNKCCVDCNTTKTPLWRGGPAGPKSLCNACGIRFRKRRIS 60

Query: 81  TRRTNRGGRDKKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTSGV--DGDENSGECG 140
           T R    G  +K+ER   N S+ +  VSATT+SSSGTT   TTT+ G   DG+E+ GEC 
Sbjct: 61  TNR----GYVRKKERP--NSSTAMGAVSATTSSSSGTTAINTTTSGGGSGDGEEDLGECR 120

Query: 141 SSRMKIMMGLEEDVMVVKK-HRWQWQRKVGEEEKQAAVSLMALSNGSL 179
           S RM++MM   E+V+VV+     Q Q K+GEEE QAAV LMALS GS+
Sbjct: 121 SLRMRVMMPFREEVVVVQNASSVQKQGKLGEEE-QAAVLLMALSCGSV 161

[Close]

BLAST of MELO3C015277.jh1 vs. ExPASy TrEMBL
Match: A0A6J1C5A4 (GATA transcription factor 17-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007526 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 4.32e-41
Identity = 101/175 (57.71%), Postives = 119/175 (68.00%), Query Frame = 0


Query: 16  FLNP-EMGFVDL---SQKGLLLADTK-CCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRK 75
           FLN  EMG +D+     K  +  DTK  CVDCKTTKTPLWRGGP GPKSLCNACGIRFRK
Sbjct: 49  FLNKAEMGMMDVLRRKNKERVEDDTKKYCVDCKTTKTPLWRGGPAGPKSLCNACGIRFRK 108

Query: 76  RKIFTRRTNRGGRDKKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTSGVDGDENS-- 135
           R++ T  TNRG  D+KRE+ H +  ST A +SATT SSS T     +   G DG+E    
Sbjct: 109 RRVSTIGTNRGC-DRKREKAHSHGGSTTAAMSATT-SSSATAADAKSNNGGADGEEEEED 168

Query: 136 -GECGSSRMKIMMGLEEDVMV---VKKHRWQWQRKVGEEEKQAAVSLMALSNGSL 179
            GECGS RM++MM L E+V+V   + K R    RK+GEEE QAAVSLMALS GS+
Sbjct: 169 LGECGSLRMRLMMALGEEVVVQQNISKQRP--PRKLGEEE-QAAVSLMALSCGSV 218

[Close]

BLAST of MELO3C015277.jh1 vs. TAIR 10
Match: AT5G26930.1 (GATA transcription factor 23 )

HSP 1 Score: 75.1 bits (183), Expect = 6.5e-14
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 37 KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRK 73
          +CC +CKTTKTP+WRGGPTGPKSLCNACGIR RK++
Sbjct: 26 RCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQR 61

[Close]

BLAST of MELO3C015277.jh1 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-13
Identity = 57/143 (39.86%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 37  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIFTRRTNRGGRDKKRERVHDNHSS 96
           K C DC T+KTPLWRGGP GPKSLCNACGIR RK++       RGG +  ++        
Sbjct: 36  KTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKR-------RGGTEDNKK-------- 95

Query: 97  TVAIVSATTTSSSGTTITTTTTTSGVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRWQW 156
                     SSSG             G+   GE  S +  +M     D+ + K+   + 
Sbjct: 96  -------LKKSSSG------------GGNRKFGE--SLKQSLM-----DLGIRKRSTVEK 137

Query: 157 QRKVGEEEKQAAVSLMALSNGSL 180
           QR+   EE+QAAV LMALS GS+
Sbjct: 156 QRQKLGEEEQAAVLLMALSYGSV 137

[Close]

BLAST of MELO3C015277.jh1 vs. TAIR 10
Match: AT3G06740.1 (GATA transcription factor 15 )

HSP 1 Score: 69.3 bits (168), Expect = 3.6e-12
Identity = 51/146 (34.93%), Postives = 68/146 (46.58%), Query Frame = 0


Query: 35  DTKCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIFTRRTNRGGRDKKRERVHDNH 94
           + K C  C T+KTPLWRGGP GPKSLCNACGIR RK+    RRT    R + +++   N 
Sbjct: 39  EKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKK----RRTLISNRSEDKKKKSHNR 98

Query: 95  SSTVAIVSATTTSSSGTTITTTTTTSGVDGDENSGECGSSRMKIMMGLEEDVMVVKKHRW 154
           +                                  + G S  + +M L  +VM+ +    
Sbjct: 99  NP---------------------------------KFGDSLKQRLMELGREVMMQRSTAE 147

Query: 155 QWQRKVGEEEKQAAVSLMALSNGSLI 181
             +R    EE+QAAV LMALS  S +
Sbjct: 159 NQRRNKLGEEEQAAVLLMALSYASSV 147

[Close]

BLAST of MELO3C015277.jh1 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 )

HSP 1 Score: 66.2 bits (160), Expect = 3.0e-11
Identity = 59/161 (36.65%), Postives = 82/161 (50.93%), Query Frame = 0


Query: 35  DTK-CCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKRKIFTRRTNRGGRDKKRERVHDN 94
           DTK  CVDC T +TPLWRGGP GPKSLCNACGI+ RK+    R+   G R +++++   +
Sbjct: 39  DTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKK----RQAALGMRSEEKKKNRKS 98

Query: 95  HSSTVAIVSATTTSSSGTTITTTTTTSGVDGDENSGECGSSRMK-----------IMMGL 154
           + +    +           I        +D D++   C + R             + +G 
Sbjct: 99  NCNNDLNLDHRNAKKYKINI---VDDGKIDIDDDPKICNNKRSSSSSSNKGVSKFLDLGF 158

Query: 155 EEDVM----VVKKHRWQWQRKVGEEEKQAAVSLMALSNGSL 180
           +  VM    V KK  W   RK+GEEE+ AAV LMALS  S+
Sbjct: 159 KVPVMKRSAVEKKRLW---RKLGEEER-AAVLLMALSCSSV 188

[Close]

BLAST of MELO3C015277.jh1 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-10
Identity = 58/165 (35.15%), Postives = 76/165 (46.06%), Query Frame = 0


Query: 37  KCCVDCKTTKTPLWRGGPTGPKSLCNACGIRFRKR------------KIFTRRTNRGGRD 96
           K CVDC T++TPLWRGGP GPKSLCNACGI+ RK+            KI ++  N  G +
Sbjct: 37  KTCVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGIRQDDIKIKSKSNNNLGLE 96

Query: 97  KKRERVHDNHSSTVAIVSATTTSSSGTTITTTTTTSGVDGD-ENSGECGSSRMKIM---- 156
            +  +        V I                   + +  D ENS    +++  +     
Sbjct: 97  SRNVKTGKGEPVNVKIAKCEPGIVKIAKGEPGNVKNKIKRDPENSSSSNNNKKNVKRVGR 156

Query: 157 ---MGLEEDVM----VVKKHRWQWQRKVGEEEKQAAVSLMALSNG 178
               G +   M    V KK  W   RK+GEEE+ AAV LMALS G
Sbjct: 157 FLDFGFKVPAMKRSAVEKKRLW---RKLGEEER-AAVLLMALSCG 197

The following BLAST results are available for this feature:

BLAST of MELO3C015277.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450587.1	6.27e-118	98.90	PREDICTED: GATA transcription factor 16-like [Cucumis melo]	[more]
TYK10277.1	2.78e-98	88.33	GATA transcription factor 16-like [Cucumis melo var. makuwa]	[more]
XP_011659732.1	5.57e-89	86.96	GATA transcription factor 16 [Cucumis sativus] >KGN66031.1 hypothetical protein ...	[more]
XP_038880207.1	4.91e-75	71.81	GATA transcription factor 17-like [Benincasa hispida]	[more]
KAG6588601.1	4.48e-44	58.93	GATA transcription factor 16, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MELO3C015277.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC59	9.1e-13	80.56	GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2	[more]
Q9FJ10	4.5e-12	39.86	GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1	[more]
Q8LG10	5.0e-11	34.93	GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2	[more]
Q9LIB5	4.2e-10	36.65	GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1	[more]
Q9SZI6	4.0e-08	33.12	Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 ...	[more]

BLAST of MELO3C015277.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQ71	3.03e-118	98.90	GATA transcription factor 16-like OS=Cucumis melo OX=3656 GN=LOC103492133 PE=4 S...	[more]
A0A5D3CE96	1.35e-98	88.33	GATA transcription factor 16-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0M1G9	2.70e-89	86.96	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G569090 P...	[more]
A0A6J1F048	3.53e-43	58.33	GATA transcription factor 16-like OS=Cucurbita moschata OX=3662 GN=LOC111437809 ...	[more]
A0A6J1C5A4	4.32e-41	57.71	GATA transcription factor 17-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of MELO3C015277.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26930.1	6.5e-14	80.56	GATA transcription factor 23	[more]
AT5G49300.1	3.2e-13	39.86	GATA transcription factor 16	[more]
AT3G06740.1	3.6e-12	34.93	GATA transcription factor 15	[more]
AT3G16870.1	3.0e-11	36.65	GATA transcription factor 17	[more]
AT4G16141.1	3.3e-10	35.15	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 33..85 e-value: 4.2E-14 score: 62.8
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 39..71 e-value: 3.0E-17 score: 61.9
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 39..64
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 39..87 score: 12.584571
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 39..91 e-value: 1.91197E-14 score: 62.3902
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 35..97 e-value: 1.2E-15 score: 59.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..127
None	No IPR available	PANTHER	PTHR47172:SF9	GATA TRANSCRIPTION FACTOR 16	coord: 35..180
None	No IPR available	PANTHER	PTHR47172	OS01G0976800 PROTEIN	coord: 35..180
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015277.jh1.t1	MELO3C015277.jh1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding