MELO3C014946 (gene) Melon (DHL92) v4

Overview


Name	MELO3C014946
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	cytochrome c oxidase subunit 6a, mitochondrial
Location	chr06: 19473643 .. 19478896 (-)
RNA-Seq Expression	MELO3C014946
Synteny	MELO3C014946

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCGTAAGGGTTTGGTCATTTCGTGGACTCGGCAATTTGTGAGAGAGAATCAAAGAGAAAATGGCAATGGCGTCGATCCGATCCAATTTTCTTCGCGCCGCCCTACGCGGTGCCTCTCGAAACTCCGTTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGACGCTCGTAAGTCTCTCTCTCTCGCTTAGGTATTTTTTTTTTAATTGCGATGGTATATGCACTCCAACTGATTCACGTCTCTCTCTATTTGCTTGTCTTTATTGACGGATTTTTTTCCTTGTTGCTTTCAGCAACTTTGTTTAGTCCATTATATGTTTTGATTTCATTCATTTTCCCGCCCTGTTTTCATCTGACGAAATGGGGGAAAGAAGGAGGATGTTGATTATTCAATCGTGTTCAAATTTTGTTTCAAACTAATTTGATTAGATGCTTTTCGTTCCTTTTAGATTGAAAGTCTTGCCTTGCAGAAGGAGGTGTTTTTGAAATTTGAACTCAGATTTAAACGTTATTCAATAGTTTTTTAAAATAATCGGATGGGATTATATACATTGTATTTGACAATTAACTGTGCATGGGGTTTCCAGCCGCTGAGAAGCAGATTTGGTTTAAAGCTTAGGAAAGAAGGCAAAGGGGGAATGATCTATTACTGAGTGGCAACACTATGATTGTTGATTTCTATAATTGAGTAAAAAATCTTGGATTTTGTGGTATATTTAATTTACCTCTGATTTCGAGTGAGTAAGGCACGGTGGAAGGGAAACACAAATGCATCTAATTTATTAGAGGGTTAAGACCTTTAGTCAAGGAACTCTTCTCCAGGTTGAAGGGTGAGTTTTTTCACCTATAATCTGATGCTTTCTTTTTTAATTAATTCTTTTCTGGGATGGAGGTCATGAAAGTTTTTCCACCTCTAATCGTATATCTGTTTCTTCTTTCTCTCACTCCTCTCCACATTTCTCTTTCCTTTTCTTCTCTCACACGTTTATCGGTTGTGGTGGTGGTGGTGGGGGGGGGGGGGATTTCTTCTTTTTTTGGAGTAGGTAAGTACACTACTGGTGCTAAGCTACTTCAGTATTGTGAATTTATTTTCTAGTAATCCACCATAACATATACTTTTGATGCCTCGTTACATTTGTTGGGTGCATATGTATTGTTAGTTTTAAATACTATTTCATTCTTATATTGTTCAAGCACGTAGGAAGAAAAAATTGAGTGCAAGATTGCTATGTCGCTTGTACTCCTTATGTTTGATCTCTCACCTTCCTTTTTTTTTTTTATGTCAGGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCTGGCATTGTAACCTGCTCTATTTTAGCATTCTATAATTTATCAAAGGGGCACCCCCACCATGAAGAGCCCCCTGTAATCTATAACTTCAGTCAATTTATACTTTTTCCTCCAGTGCTGAGTTCCTAGTTGCATTGTGGAATTCTGTATTGTACTCTCATGTGTTAACCATTTATTTTTGTTTGGGTTTTCACTGTCTGCAGGCATATCCATATTTGCACATTCGCAATAAAGAGTTCCCTTGGGGTAAGTTTCCACTTCATTCAAAGTTATATGACATCTTGTATATCTCTTTGCAATTGCTATTTGGGTTTTATAATATATTTTAAGTCAAAACATATAATTTCCATGAAGTGGTGGTTTTTTATTTTTTATTTTATTTTAATTTGATTTTGGTGCTAGTTGTTTCCTTAAAATGAACTAGTAAAGCATTGCTCTTGTGAATTTAAATTTAGACGTAATGCAGAGTTTCCAATAAAACAGTGATTATGCTCCTTTGCAAACTCAGTCATAATTATTGGTGCGTTTTCTTTATTTGGATTGGACATTGTTGATTGTAATCAGAAAGGAAAGTTGATTAGCAGTCCTTATTTTCTCTGTTTACGTTGCTTGATCACAATGTTAGTAAAATAATGTTGGAATCTGGAAGCTGAACCATCCTATTAGTTTGCCAAGTAAATGTACAGCTATTATGTAACCAATAGATTTACTACTAACTCAGCAGCTAGTAACTAATATGCTTGTAACTACCTCGTTCAGCTTGCTAGCAATCTTTAGATCTAGTTCATTACCTTCTCCTTTCATTAATCCAACTCTAACTTAACTTTGAAACTCTTCAACCCCAAATGTTGAATGGGGTAGTTCAACGGCTTCCTCTGTTGGTTGCTTGATCATCTCAGGGTTTTATGGACACTTCCTGGTTTATTATTATTTATTTTATTTTTTAGGACAAGAAACAATTATGTATTACCCATTAACAAAAGAGACAGCCTAAGGGCAAGGAGTTGAGGGCCTACAAAACTAATAAAGAAGAGTCTTCCAATTGTTAAGAATCATAAGAAGGCTATAATTTCCAAAAAAGAAAAAAATGGTGTAATTTATGCACCACCAAGAGTTTGTATGCTGGACAAAGACCAGAAAGAATCGAAAGAAGCAAACTTATCTTCAAACTTCTTGCTCTTTCTTTCTTTCCAAAGACACCCAAGAAGAGCACGAGTATCACATCTTCAATGGATTTTGCCCACCCACAAAATCTACCACCCTCCAACTCGTCGATCATCCAATCATCAATCATCTTAGGAAGGCTTCCTACCGACCCAAATATTTAGAAAAATGAAGAACACGCTTTTTGGCAACAAACTCTCAATGTAAAAACTAAAAACAGGTGATACACAATTTACATCTCTACAAGGCAAGATAGCACATGGAAGGAGAAAGTGACCAACTATAGAACTTCCTTTGGGGCTTCTCAGGGGTATTCAAGCTTCTAAAACCAGTGACTAGAGGAAGCTTCCATCCCTAGGATCCCTCTCCACTCCCTTAAACACCCTACTGTTTTGCTTACCCCACAAAACTTAAGAGACCGAAACTATCTGGCAATCGAAAGAAACCAACCTTTCTTTCCAAATGGCTATCTGTGGAGGAACTCCTTGATCATAGCACTGACATATCTATAACGAACGATCATCATACTAAGGGTGTGGAAAAAGGAACCCTTGACACCACTTACAAAATCACAACATCAAAGAATAGGGTCTAGGTCTTTCTTCACCTTTTGTCAAAGAATACAACAAAAAGGCCCAATAAGCCAAGATATCTTCTTGATTAGCTTGTCCAGCGTGTTAGCACGACTGCAAAGAACCTACCAAGCATAGAGGGCCACCTTTCTAGGGACCTTAATCCTCTAAAAGATCGATTCACCTAAGGGGAAAGGAAGAAAACTTGCATGAGAACTCTTCTGAAGGATTGGGGCTCCAAAATCTGACATCCTTTCTCCCCAATCTATAGGGGTGACTCTTGAGTAAACAAAGAATAGTGGTCACATCTGTTGCTTCCCTATTAGAAAGAGAACAAGTAAAATCCAATTGAAAAGGAACAAAAGCTCTCAGACCACACTAAAAAGGGACAACAAAATGACTTTTGAAAGATGACAATTAATACAATCAAGAAAACATATCCCAATGGGACGTTTGGGGCAATGAGTTGGTTATTATAGTCGTTGGTTATTATAGTCGTAGGTTATTATAGTTTGGTTATAATAGTTTGCGTGCAGGATGTAGATTATTTTAGTTTGGGTGATAATAACATGCATTTGAGTAAACTATCTTAGTTTGAGAAGAAAATAGTAAACACTATAACAAAGAATAAGAAAATGACAAATGTAAAACATAAAATCTTGTAGCAGATAATAAAAACTATAGCAAATAGGGGTTTTGGAGTAGTGTTGATTGTAATTAATTGGAGACTACAAGATAGTGTTTACTGTAGCAAGGAGGTGGTTATTATAATCTTAGATAGTTCATCCTCCAAACAACTCCAAAGAGGTTGTCCACTGTTCTAGCTTTCGAATTAAGTTCTAGCCATGAAGTAGTAGTTGATAATAATTGGTAGGACATTCTTTACAATATTTTCATAGAACTCTAAAAAATGATCTCGTAAAGGGGCGTCACCAAACTAATAGGCTGATTCACGAACTCTAGCTATCTTCTTCTTCTTTTGTCTTTTCTTGTACATGTCCTTTTTCTGTTACTTGTTTGACCGGTCTTCCCTAAAGAGTCGGTCTTGCACTTTGGACAATTGATTCTAAAAAAAGTGAAGGTTTTTACTTTGCAAGTTTTACATGGTTGTGCTAACTAACACGATGGATTGGCTTGTGAAGAAGTTTCCCTTGCTTGGCCCCCTTTGCTGTATTCTTCGTTGGAAGATGAAGGAAGACTTGGATCATATTCTCTGTAGTTCTAAGTTATCGAGAGCTATGTGGGGTTACTCTATTAGACAATTGGGTTCTTGCATGCTAGACATAGGGTTACTAATGATATGACTTGGCGAGTTCCTCCTCCATTTTGCCCTTTTGGAAGGAGGAGGTGCTTTTTATGGATGGCCAGGCTTTGGGTTTTGTAGGGGAATAAAATAGCAGGATGTTGAGGGACTATTTTGATGTTTGGTCCTTTGTTTTAGTTACTACATTTTGCTTTGGGTTTCAGCTTCAAAGACCTTTTGTAACTATTCTGTTGATTCTATTTTGCATAGGTGAAGTCTCTTCCTTGAGAGGGATTTGTCTCTCTTGTATGCTTTTAGGTTTTTGAAGTTGTTCTTAAACCCTTTTTGGGGAACTGTTTGCTAACAGTTGCTTTCCTCATTTATGAAAGATGGCTGAATTTGATGGATGATCTGATATTCATTCTCATCTTTCCTCTATGTTCCTTGCTCAACTGCTTCTTCACCGTTTATTATCCATTGTCAAAGTAAAATTGTTTTTACTGATTTAAAAAATAATATATATATATATATATGTTTCTTGTGCTTTAGGTCCTGATGGTCTCTTTGAGGTGAAGCACCACTAAGGATTACTTTTGGGTTCAAAAGCGCATCAGAGTTCTCATTCTGTTCCATATCAGAAAAGACTTCATGGACTGGTTGGTTTAGATTTTTTCTCTGCAAAGGAAAAGCCATGGCATGGCCATTTTGCATTTGTTAAAATGCTATCAGAATATTATGTGAATCATGGTTTGAAGTTCTTTTTTTTGTCACAGCCTTCCTTCCTGATTAATAAGATAAAATTTCTTCCCATTGTGCTAAAAGGTCTGCGGTAAGCTTTGTTTGGGTTGAAAAGTGAGCTTCTATAACTTCTGGTACTTGATGGGTAATAATTGTTACTTTGGTGAACTGAAACAATTGCTAGGTGTTATCAACACAATTGGATCATTTTCAT

mRNA sequence

AATCGTAAGGGTTTGGTCATTTCGTGGACTCGGCAATTTGTGAGAGAGAATCAAAGAGAAAATGGCAATGGCGTCGATCCGATCCAATTTTCTTCGCGCCGCCCTACGCGGTGCCTCTCGAAACTCCGTTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGACGCTCGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCTGGCATTGTAACCTGCTCTATTTTAGCATTCTATAATTTATCAAAGGGGCACCCCCACCATGAAGAGCCCCCTGTAATCTATAACTTCAGTCAATTTATACTTTTTCCTCCAGTGCTGAGTTCCTAGTTGCATTGTGGAATTCTGTATTGTACTCTCATGTGTTAACCATTTATTTTTGTTTGGGTTTTCACTGTCTGCAGGCATATCCATATTTGCACATTCGCAATAAAGAGTTCCCTTGGGGTCCTGATGGTCTCTTTGAGGTGAAGCACCACTAAGGATTACTTTTGGGTTCAAAAGCGCATCAGAGTTCTCATTCTGTTCCATATCAGAAAAGACTTCATGGACTGGTTGGTTTAGATTTTTTCTCTGCAAAGGAAAAGCCATGGCATGGCCATTTTGCATTTGTTAAAATGCTATCAGAATATTATGTGAATCATGGTTTGAAGTTCTTTTTTTTGTCACAGCCTTCCTTCCTGATTAATAAGATAAAATTTCTTCCCATTGTGCTAAAAGGTCTGCGGTAAGCTTTGTTTGGGTTGAAAAGTGAGCTTCTATAACTTCTGGTACTTGATGGGTAATAATTGTTACTTTGGTGAACTGAAACAATTGCTAGGTGTTATCAACACAATTGGATCATTTTCAT

Coding sequence (CDS)

ATGGCAATGGCGTCGATCCGATCCAATTTTCTTCGCGCCGCCCTACGCGGTGCCTCTCGAAACTCCGTTCAGCCTAAACGCGGCTTTGCTTCCTCTGCTCACGACGACGCTCGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCTGGCATTGTAACCTGCTCTATTTTAGCATTCTATAATTTATCAAAGGGGCACCCCCACCATGAAGAGCCCCCTGTAATCTATAACTTCAGTCAATTTATACTTTTTCCTCCAGTGCTGAGTTCCTAG

Protein sequence

MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNLSKGHPHHEEPPVIYNFSQFILFPPVLSS

Homology

[Close]

BLAST of MELO3C014946 vs. NCBI nr
Match: XP_011650607.1 (cytochrome c oxidase subunit 6a, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 174.5 bits (441), Expect = 4.2e-40
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMASIRSN LRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY
Sbjct: 1  MAMASIRSNLLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 NLSKGHPHHEEPPVIYNFSQFILFPPVLSS 91
          NLSKGHPHHEEPPV YNFSQFILFP VLS+
Sbjct: 61 NLSKGHPHHEEPPVSYNFSQFILFPQVLST 90

[Close]

BLAST of MELO3C014946 vs. NCBI nr
Match: XP_008450167.1 (PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Cucumis melo])

HSP 1 Score: 150.2 bits (378), Expect = 8.5e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY
Sbjct: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 NLSKGHPHHEEPP 74
          NLSKGHPHHEEPP
Sbjct: 61 NLSKGHPHHEEPP 73

[Close]

BLAST of MELO3C014946 vs. NCBI nr
Match: XP_011650608.1 (cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sativus] >KAE8650204.1 hypothetical protein Csa_009645 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 4.2e-32
Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMASIRSN LRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY
Sbjct: 1  MAMASIRSNLLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 NLSKGHPHHEEPP 74
          NLSKGHPHHEEPP
Sbjct: 61 NLSKGHPHHEEPP 73

[Close]

BLAST of MELO3C014946 vs. NCBI nr
Match: XP_038905594.1 (cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida])

HSP 1 Score: 142.5 bits (358), Expect = 1.8e-30
Identity = 68/73 (93.15%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMASIRSN LRAA+RGASRNS QPKRGFASSAHDDARETAKWEKITYAGI TC+ILAFY
Sbjct: 1  MAMASIRSNLLRAAVRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIATCTILAFY 60

Query: 61 NLSKGHPHHEEPP 74
          NLSKGHPHHEEPP
Sbjct: 61 NLSKGHPHHEEPP 73

[Close]

BLAST of MELO3C014946 vs. NCBI nr
Match: XP_023551866.1 (cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.4 bits (355), Expect = 3.9e-30
Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMA+IRSN LRAALRGASRNS QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFY
Sbjct: 1  MAMATIRSNLLRAALRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPP 74
          NLSKGHPH+EEPP
Sbjct: 61 NLSKGHPHYEEPP 73

[Close]

BLAST of MELO3C014946 vs. ExPASy Swiss-Prot
Match: Q9T070 (Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX6A PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.0e-17
Identity = 46/74 (62.16%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAF 60
          MA A +RS   RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPP 74
          Y LSKGH H E+PP
Sbjct: 61 YVLSKGHHHGEDPP 74

[Close]

BLAST of MELO3C014946 vs. ExPASy TrEMBL
Match: A0A1S3BPM0 (cytochrome c oxidase subunit 6a, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491837 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.1e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY
Sbjct: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60

Query: 61 NLSKGHPHHEEPP 74
          NLSKGHPHHEEPP
Sbjct: 61 NLSKGHPHHEEPP 73

[Close]

BLAST of MELO3C014946 vs. ExPASy TrEMBL
Match: A0A0A0L3I0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G115610 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-31
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 3  MASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNL 62
          MASIRSN LRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNL
Sbjct: 1  MASIRSNLLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFYNL 60

Query: 63 SKGHPHHEEPP 74
          SKGHPHHEEPP
Sbjct: 61 SKGHPHHEEPP 71

[Close]

BLAST of MELO3C014946 vs. ExPASy TrEMBL
Match: A0A6J1ERW3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435960 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.5e-30
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMA+IRSN LRAA RGASRNS QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFY
Sbjct: 1  MAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPP 74
          NLSKGHPH+EEPP
Sbjct: 61 NLSKGHPHYEEPP 73

[Close]

BLAST of MELO3C014946 vs. ExPASy TrEMBL
Match: A0A6J1J8L1 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111482732 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.6e-29
Identity = 66/73 (90.41%), Postives = 68/73 (93.15%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMA IRSN LRAA RGASRN  QPKRGFASSAHDDARETAKWEKITYAGIV+CSILAFY
Sbjct: 1  MAMAMIRSNLLRAAFRGASRNPAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFY 60

Query: 61 NLSKGHPHHEEPP 74
          NLSKGHPH+EEPP
Sbjct: 61 NLSKGHPHYEEPP 73

[Close]

BLAST of MELO3C014946 vs. ExPASy TrEMBL
Match: A0A6J1KMD3 (cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495450 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 64/73 (87.67%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSAHDDARETAKWEKITYAGIVTCSILAFY 60
          MAMA+IRSN LRAA+RGASRNS QPKRGFASSAHDDA ETAKWEKITYAGI  C+ LAFY
Sbjct: 1  MAMATIRSNLLRAAIRGASRNSAQPKRGFASSAHDDALETAKWEKITYAGIAACTTLAFY 60

Query: 61 NLSKGHPHHEEPP 74
          NLSKGHPHHEEPP
Sbjct: 61 NLSKGHPHHEEPP 73

[Close]

BLAST of MELO3C014946 vs. TAIR 10
Match: AT4G37830.1 (cytochrome c oxidase-related )

HSP 1 Score: 88.6 bits (218), Expect = 2.8e-18
Identity = 46/74 (62.16%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAF 60
          MA A +RS   RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPP 74
          Y LSKGH H E+PP
Sbjct: 61 YVLSKGHHHGEDPP 74

[Close]

BLAST of MELO3C014946 vs. TAIR 10
Match: AT4G37830.2 (cytochrome c oxidase-related )

HSP 1 Score: 88.6 bits (218), Expect = 2.8e-18
Identity = 46/74 (62.16%), Postives = 52/74 (70.27%), Query Frame = 0


Query: 1  MAMASIRSNFLRAALRGASRNSVQPKRGFASSA-HDDARETAKWEKITYAGIVTCSILAF 60
          MA A +RS   RA  R A + SV PKR F+SSA HDDA E AKWEKITY GI +C+ LA 
Sbjct: 1  MATAIVRSALSRAVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAV 60

Query: 61 YNLSKGHPHHEEPP 74
          Y LSKGH H E+PP
Sbjct: 61 YVLSKGHHHGEDPP 74

The following BLAST results are available for this feature:

BLAST of MELO3C014946 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650607.1	4.2e-40	95.56	cytochrome c oxidase subunit 6a, mitochondrial isoform X1 [Cucumis sativus]	[more]
XP_008450167.1	8.5e-33	100.00	PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Cucumis melo]	[more]
XP_011650608.1	4.2e-32	98.63	cytochrome c oxidase subunit 6a, mitochondrial isoform X2 [Cucumis sativus] >KAE...	[more]
XP_038905594.1	1.8e-30	93.15	cytochrome c oxidase subunit 6a, mitochondrial [Benincasa hispida]	[more]
XP_023551866.1	3.9e-30	93.15	cytochrome c oxidase subunit 6a, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C014946 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T070	4.0e-17	62.16	Cytochrome c oxidase subunit 6a, mitochondrial OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of MELO3C014946 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPM0	4.1e-33	100.00	cytochrome c oxidase subunit 6a, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0L3I0	1.7e-31	98.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G115610 PE=3 SV=1	[more]
A0A6J1ERW3	5.5e-30	91.78	cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1J8L1	3.6e-29	90.41	cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ...	[more]
A0A6J1KMD3	1.4e-28	87.67	cytochrome c oxidase subunit 6a, mitochondrial-like OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of MELO3C014946 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37830.1	2.8e-18	62.16	cytochrome c oxidase-related	[more]
AT4G37830.2	2.8e-18	62.16	cytochrome c oxidase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036418	Cytochrome c oxidase, subunit VIa superfamily	GENE3D	4.10.95.10	Cytochrome c oxidase, subunit VIa	coord: 29..83 e-value: 3.1E-5 score: 25.8
IPR036418	Cytochrome c oxidase, subunit VIa superfamily	SUPERFAMILY	81411	Mitochondrial cytochrome c oxidase subunit VIa	coord: 30..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..38
None	No IPR available	PANTHER	PTHR11504:SF5	CYTOCHROME C OXIDASE SUBUNIT 6A, MITOCHONDRIAL-LIKE ISOFORM X1	coord: 1..80
IPR001349	Cytochrome c oxidase, subunit VIa	PANTHER	PTHR11504	CYTOCHROME C OXIDASE POLYPEPTIDE VIA	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014946.1	MELO3C014946.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005751	mitochondrial respiratory chain complex IV
molecular_function	GO:0004129	cytochrome-c oxidase activity