MELO3C014942 (gene) Melon (DHL92) v4

Overview


Name	MELO3C014942
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Stress response protein NST1-like
Location	chr06: 19643888 .. 19644103 (+)
RNA-Seq Expression	MELO3C014942
Synteny	MELO3C014942

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAATGCCAAAGAGCCCATTCTAGAAGTTGAAGAATGGTTTAGACGGGAAGAAAACATTTACCATGGGCTAGTTGATCTGAAACCGAGGGTGAGCATAATGGGGCTTGATAATGATCAACTGAGTTACAAACACGTTAAGCATGAGGCAGGCAAAGTGATTTTGGTAATAGAAGAATTGAGTGAGGCAAGCGAGATTGAAGTTCCAACCTAA

mRNA sequence

ATGGTGAATGCCAAAGAGCCCATTCTAGAAGTTGAAGAATGGTTTAGACGGGAAGAAAACATTTACCATGGGCTAGTTGATCTGAAACCGAGGGTGAGCATAATGGGGCTTGATAATGATCAACTGAGTTACAAACACGTTAAGCATGAGGCAGGCAAAGTGATTTTGGTAATAGAAGAATTGAGTGAGGCAAGCGAGATTGAAGTTCCAACCTAA

Coding sequence (CDS)

ATGGTGAATGCCAAAGAGCCCATTCTAGAAGTTGAAGAATGGTTTAGACGGGAAGAAAACATTTACCATGGGCTAGTTGATCTGAAACCGAGGGTGAGCATAATGGGGCTTGATAATGATCAACTGAGTTACAAACACGTTAAGCATGAGGCAGGCAAAGTGATTTTGGTAATAGAAGAATTGAGTGAGGCAAGCGAGATTGAAGTTCCAACCTAA

Protein sequence

MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSIMGLDNDQLSYKHVKHEAGKVILVIEELSEASEIEVPT

Homology

[Close]

BLAST of MELO3C014942 vs. NCBI nr
Match: KAA0060351.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 139.8 bits (351), Expect = 9.0e-30
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSIMGLDNDQLSYKHVKHEAGKVILVIEE 60
           MVNAKEPILEVEEWFRREENIYHGLVDLKPRVS MGLDNDQLSYKHVKHEAGKVIL IEE
Sbjct: 66  MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEE 125

Query: 61  LSEASEIEVPT 72
           LSEASEIEVPT
Sbjct: 126 LSEASEIEVPT 136

[Close]

BLAST of MELO3C014942 vs. NCBI nr
Match: KAA0052868.1 (stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 66.6 bits (161), Expect = 9.7e-08
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0


Query: 8  ILEVEEWFRREENIYHGLVDLKPRVSIMGLDNDQLSYKHVKHEAGK 54
          ILE +EW R++E+IYHGL DLK R+ IM LD+DQ  YKH+KH A K
Sbjct: 37 ILEADEWMRQDESIYHGLTDLKSRMGIMRLDDDQPRYKHLKHGAEK 82

[Close]

BLAST of MELO3C014942 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 6   EPILEVEEWFRREENIYHGLVDLKPRVSIMGLDNDQLSYKHVKHEAGKVILVIEELSE 64
           + IL   +W RREENIY GL+DLKP +  M LD+++   KH+KHEA KV++   E S+
Sbjct: 61  DSILNANKWMRREENIYKGLLDLKPDMETMRLDDNRPKNKHLKHEANKVLVGHREASK 118

[Close]

BLAST of MELO3C014942 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06
Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 6   EPILEVEEWFRREENIYHGLVDLKPRVSIMGLDNDQLSYKHVKHEAGKVILVIEELSEAS 65
           + IL   +W RREENIY GL+DLKP +  M LD+++   KH+KHEA KV++   E S+  
Sbjct: 61  DSILNANKWMRREENIYKGLLDLKPDMETMRLDDNRPKNKHLKHEANKVLVGHREASK-K 120

Query: 66  EIE 69
           E+E
Sbjct: 121 EVE 122

[Close]

BLAST of MELO3C014942 vs. ExPASy TrEMBL
Match: A0A5A7V3K9 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G001420 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.4e-30
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSIMGLDNDQLSYKHVKHEAGKVILVIEE 60
           MVNAKEPILEVEEWFRREENIYHGLVDLKPRVS MGLDNDQLSYKHVKHEAGKVIL IEE
Sbjct: 66  MVNAKEPILEVEEWFRREENIYHGLVDLKPRVSTMGLDNDQLSYKHVKHEAGKVILGIEE 125

Query: 61  LSEASEIEVPT 72
           LSEASEIEVPT
Sbjct: 126 LSEASEIEVPT 136

[Close]

BLAST of MELO3C014942 vs. ExPASy TrEMBL
Match: A0A5D3BXZ2 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00240 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.7e-08
Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 0


Query: 8  ILEVEEWFRREENIYHGLVDLKPRVSIMGLDNDQLSYKHVKHEAGK 54
          ILE +EW R++E+IYHGL DLK R+ IM LD+DQ  YKH+KH A K
Sbjct: 37 ILEADEWMRQDESIYHGLTDLKSRMGIMRLDDDQPRYKHLKHGAEK 82

[Close]

BLAST of MELO3C014942 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.8e-07
Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 6   EPILEVEEWFRREENIYHGLVDLKPRVSIMGLDNDQLSYKHVKHEAGKVILVIEELSEAS 65
           + IL   +W RREENIY GL+DLKP +  M LD+++   KH+KHEA KV++   E S+  
Sbjct: 61  DSILNANKWMRREENIYKGLLDLKPDMETMRLDDNRPKNKHLKHEANKVLVGHREASK-K 120

Query: 66  EIE 69
           E+E
Sbjct: 121 EVE 122

[Close]

BLAST of MELO3C014942 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.8e-07
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 6   EPILEVEEWFRREENIYHGLVDLKPRVSIMGLDNDQLSYKHVKHEAGKVILVIEELSE 64
           + IL   +W RREENIY GL+DLKP +  M LD+++   KH+KHEA KV++   E S+
Sbjct: 61  DSILNANKWMRREENIYKGLLDLKPDMETMRLDDNRPKNKHLKHEANKVLVGHREASK 118

The following BLAST results are available for this feature:

BLAST of MELO3C014942 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060351.1	9.0e-30	97.18	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0052868.1	9.7e-08	63.04	stress response protein NST1-like [Cucumis melo var. makuwa] >TYK04357.1 stress ...	[more]
TYK25768.1	1.4e-06	50.00	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0038829.1	1.4e-06	49.21	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C014942 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C014942 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V3K9	4.4e-30	97.18	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BXZ2	4.7e-08	63.04	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TBU7	6.8e-07	49.21	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DQE7	6.8e-07	50.00	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of MELO3C014942 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014942.1	MELO3C014942.1	mRNA