MELO3C014562 (gene) Melon (DHL92) v4

Overview


Name	MELO3C014562
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RING-type domain-containing protein
Location	chr05: 1379232 .. 1382607 (+)
RNA-Seq Expression	MELO3C014562
Synteny	MELO3C014562

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTTCTCGTCAAGAACTCCTAGATCGCGAGTAGAGAATATTCTCGAGCATCGTTTTCTTTTCTTCTGGTTCAGAATAATTCCTTCAGCATCTCTTTTCATCTCAAGTTTTTGATTGATTTGTGCTGAACAACAACTATTTGGGGTTCTTGTGTAATTTAAGAGCGAGGAAGATCGGAAAGACAAACCCTCGTGTACTCGCTATGTCTTCTTCCGGAATCTCTTCCCAAAGCTCCCAATTGACAGATGCGGTTCAAGGACTAGTTCTTAGCGATCAGGTTTTATTATTTATCTATTCATTTTCGGAGTTGATGTACTTTTACGCGCTTTCTTTATTTAAGAGAATCTGAGGTGTGTGAGAAATGGTTGTTTTTCGATTTGTGTTGATAGTTCTTATTGGAAGTATTGGTGTTCTCAAATCTGAAATTGTTGATTTAGTCTTGGTGTCATTTGCTTTTCAAGATTTGCGTTTCTTGGGGGCTAATTAAATGAGTCAGAGATTGTTGGGTTAGTCTTGTTTTTTTCATCGTCTAGATTATGGACGTCGGGGATTGTTTTCTGCGTTTTGATGTCTAGAGGAAAATGGTTCAATCGAATTGAATATCATAATAATCTGTTCATGTTCACCCGTTTGTCAGTAATTGTTGTTTTTCTTTTGCGAATTTGGTCGGTCGCGTGTGAATAATTTTATTTATTCTTTAAAGAAGATTGATTTTTCCTCTATTTCAGTTCGAGTTGCATTACCATGATTTTGTCCAAGTGTCTGTTTTCTGACTTTCTGGATTTGTATGTTTAGTTGGAAATGTAGATCTTTCTTGTTCTGGTTCAGAATAATTCTTTAGTCTCTCCTTTTTTCTTTAGTTTTGATTTGTGCTGAACAACTGTTCGGGTTCTGTGTTTTTTAGAGCGATAAAGATCGGAGGGTTATGACAACTTCTTCCGGAATCTCTATCCAGAGCGCTGAAATTTCAGATGCCGTTCAAGAACAAGTAACTTGCCACCAGGTTTTTTCTATCTATTCATTTTCGATGTCGATCTACTTTCAAGCACTTTCCTTTTTCTAGAGAATCAGGGGCGTAAAACTGTGGTAGGAAATGATTGTCTACAATTTGTTTTGCTAGTTCTTATGGGAAATATAGTGAATCTGAAACCGTTAATCTAGTTAGTTTTGTTGCCATTTGTTTTTTCTAGATCTGTAACCGTTGGGTTGATCATGTTTCTTTCATTGTCAAGATTGTGGATATCAGGCCCTGCGATATAATATCTAGGGAGAATATGGTTTTGAATTGAATTTTAGATTGGTTGAATGGCTATGAGGAATCATAAAAAGCAGGAACTATTGCTTATGTTCATCTTGTTTTTCTCTTGCGTTGGTTTGTCACCTGTGTTTGTTTTTCTTTATTCTATCAGGAAGATTTCCTCTCTTTCAGTTAGAGCTGCATTTCTATGATTCTGTTTGATTGCTTGTTTTAGAATATTGAATATTCTCTGCATGCTTCAAGGATTTCTTATTTTGTGGATTTGTATGTTCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATTTGCTTGAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCACGCCTATTGGTTTGTTCCTATCGATTCATCTTTCGTCTACTTATAAATATTTTCTATAGCATGACTTATTCATTTCGTTGTCGCTCTATGCTTGTATTGGAGATGGAGTTTTAAGTTGTTGCGAACGTATTCCTGGGAGTCCGCTAAACTTTGTAGGAGAAAATTCACTGTATCCATATTGCCTTTGGTGCAATGTTTCTAATTGTACTTGAGGTTGCTCGGATTTAATTGGAAGAGGTATGCTGTTTTAGATTTATAACCAAAACATCTTGGAGTTAGGGAATTGTATGGTATGGAGTCATATCGATAATTTGTTGTTATTTGAAAGAAAGATATATCATAAACTATCCGAAGTCAGAGTTAAGTCTTGTCTTATATAGTTTATTGGTAGTTGAACTTAAAATGCTTGGTGGTATTTGGACCAAATTAGACTGACAACCGCCGGTTAATTATTATGACATATGATGGACACACTCTAAATATGACACATATCAAACACCGTGTTGAATATTTGATGGGATGGGTACAAAGTACAATAGACACAAAGCACATATTGGAACAATTATTAGGCATTTGGATATCTCCGAATTCGGCAGAGATGGCATGTCGCGTATGCTTCTTTTTTGGAAGCGAGTTACCCTTTCAGCTCTTCCAAATTATGAATTTTCGATGCATGTTATAGTTGTATGTTTTGGCTTTATTTTATTTTATTTAGTCTTTCATTTACTTTCTTGAAGTGCAACTTGCATCCTTCGATGGGCCTCATACACTCAAAAGCCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGGTTTGTCCATTCATTATTCTCGGGAGATCTTTTGTAGATTTAGTTTAGATTTGAACCATTGTTTTAAATTACCGTTCTTATTAAATATTGCCTTTGCATTGTTAGCATCCACGACTACATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCGTGGTATAAACCTCTAATCTTTGAAGAACGGGAGGAAACGTATGATGAGCCTGAGGACGACCAATACTATCATTATGAGGATGATGATGAAGAGTTAGAGGATGCCTACCTGGGTGAATCACCATCTCTCCGCATCGGGAATCGAAGGTGGGGATACAATGGTTACGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGAGGACCAAGTTCATCGAGGGATCCCGTAACAAAACAGGCCTCCAAAGACAAAACAGGTCGACGTGCTAAAAGGGCCTTGAAACGGGAAGCAGCAGATAAGGCTGCAGCCGCCAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAGTGATTTTTATATTTAAAACTTCTGTACATAACTAAGCTCTTTTCTTTTCTATGTGTACAGCTCTTTGATTCAATCTTCTTTTCCTTAGCCAATGTGCCTTGCTAAAAGGCTGGTGGCTCCCAATGAAAAACTAAGATAGAGATCATACATGCTGACAAGGGCGGCGTACATGGCAGCGCCTGCAGAATTCTTTGTACAAAACTTTGGATCTCAAAATCATTCGTAAAAGAATTATTAGGAGTTAGCGCTGTAAGTTTCATGTATTGAAACTTTCCAGAACAAACTAGGCGATGAACATATTTGTTATTGTTGTAGCTACTTGTAGTACATCTAATAAAATTTGTCTTTTCAGGAG

mRNA sequence

AAATTTTCTCGTCAAGAACTCCTAGATCGCGAGTAGAGAATATTCTCGAGCATCGTTTTCTTTTCTTCTGGTTCAGAATAATTCCTTCAGCATCTCTTTTCATCTCAAGTTTTTGATTGATTTGTGCTGAACAACAACTATTTGGGGTTCTTGTGTAATTTAAGAGCGAGGAAGATCGGAAAGACAAACCCTCGTGTACTCGCTATGTCTTCTTCCGGAATCTCTTCCCAAAGCTCCCAATTGACAGATGCGGTTCAAGGACTAGTTCTTAGCGATCAGAGCGATAAAGATCGGAGGGTTATGACAACTTCTTCCGGAATCTCTATCCAGAGCGCTGAAATTTCAGATGCCGTTCAAGAACAAGTAACTTGCCACCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATTTGCTTGAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCACGCCTATTGTGCAACTTGCATCCTTCGATGGGCCTCATACACTCAAAAGCCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCACGACTACATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCGTGGTATAAACCTCTAATCTTTGAAGAACGGGAGGAAACGTATGATGAGCCTGAGGACGACCAATACTATCATTATGAGGATGATGATGAAGAGTTAGAGGATGCCTACCTGGGTGAATCACCATCTCTCCGCATCGGGAATCGAAGGTGGGGATACAATGGTTACGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGAGGACCAAGTTCATCGAGGGATCCCGTAACAAAACAGGCCTCCAAAGACAAAACAGGTCGACGTGCTAAAAGGGCCTTGAAACGGGAAGCAGCAGATAAGGCTGCAGCCGCCAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAGTGATTTTTATATTTAAAACTTCTGTACATAACTAAGCTCTTTTCTTTTCTATGTGTACAGCTCTTTGATTCAATCTTCTTTTCCTTAGCCAATGTGCCTTGCTAAAAGGCTGGTGGCTCCCAATGAAAAACTAAGATAGAGATCATACATGCTGACAAGGGCGGCGTACATGGCAGCGCCTGCAGAATTCTTTGTACAAAACTTTGGATCTCAAAATCATTCGTAAAAGAATTATTAGGAGTTAGCGCTGTAAGTTTCATGTATTGAAACTTTCCAGAACAAACTAGGCGATGAACATATTTGTTATTGTTGTAGCTACTTGTAGTACATCTAATAAAATTTGTCTTTTCAGGAG

Coding sequence (CDS)

ATGTCTTCTTCCGGAATCTCTTCCCAAAGCTCCCAATTGACAGATGCGGTTCAAGGACTAGTTCTTAGCGATCAGAGCGATAAAGATCGGAGGGTTATGACAACTTCTTCCGGAATCTCTATCCAGAGCGCTGAAATTTCAGATGCCGTTCAAGAACAAGTAACTTGCCACCAGTTGGAAATGGGAAAGAAAGTAGAGATTCAAGGAACGGGGCATGGTAGTCACGATGGGGCTTGTGCAATTTGCTTGAATAAGATAGCACTTCAAGAAACTGCTTTAGTAAGAGGCTGTGAGCACGCCTATTGTGCAACTTGCATCCTTCGATGGGCCTCATACACTCAAAAGCCGACTTGTCCACAATGTAAACATCCATTTGAGTTCCTGATCGTTCATCGTTCTCTTGATGGGAGCATCCACGACTACATGTTTGAGGAGAGTGTATGCCTGCTTCTGAGAGCTTCGTGGTATAAACCTCTAATCTTTGAAGAACGGGAGGAAACGTATGATGAGCCTGAGGACGACCAATACTATCATTATGAGGATGATGATGAAGAGTTAGAGGATGCCTACCTGGGTGAATCACCATCTCTCCGCATCGGGAATCGAAGGTGGGGATACAATGGTTACGTGAGGGCAGGTAGACAGGAAGCCCGACCAGTTCTTAGGCAGGAGTTTACTGGAGGACCAAGTTCATCGAGGGATCCCGTAACAAAACAGGCCTCCAAAGACAAAACAGGTCGACGTGCTAAAAGGGCCTTGAAACGGGAAGCAGCAGATAAGGCTGCAGCCGCCAAGCATCAAGAACATCTGGCTAGGTTTGGCCGGAAGTGA

Protein sequence

MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

Homology

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BLAST of MELO3C014562 vs. NCBI nr
Match: TYJ96112.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 545.0 bits (1403), Expect = 3.6e-151
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60
           MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 277
           SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of MELO3C014562 vs. NCBI nr
Match: XP_016900768.1 (PREDICTED: uncharacterized protein LOC103491476 [Cucumis melo])

HSP 1 Score: 535.4 bits (1378), Expect = 2.9e-148
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60
           MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 272
           SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 271

[Close]

BLAST of MELO3C014562 vs. NCBI nr
Match: KAA0061770.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 525.4 bits (1352), Expect = 3.0e-145
Identity = 268/271 (98.89%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60
           MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYD+PEDDQYYH  
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDDPEDDQYYH-- 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 272
           SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 269

[Close]

BLAST of MELO3C014562 vs. NCBI nr
Match: XP_004140197.1 (uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus] >KGN48101.1 hypothetical protein Csa_003121 [Cucumis sativus])

HSP 1 Score: 510.8 bits (1314), Expect = 7.6e-141
Identity = 264/277 (95.31%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60
           MSSSGISSQSS+LTDAVQGLVL DQSDKDRR M TSSGISIQSAEISDAVQEQVTC QLE
Sbjct: 1   MSSSGISSQSSELTDAVQGLVLCDQSDKDRRAMATSSGISIQSAEISDAVQEQVTCDQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYT+KPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTKKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I EEREETYD+PEDDQYY YE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT GPSSSR+PVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT-GPSSSREPVTKQA 240

Query: 241 -SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 277
            SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 241 SSKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of MELO3C014562 vs. NCBI nr
Match: XP_011657615.1 (E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 2.4e-126
Identity = 235/245 (95.92%), Postives = 238/245 (97.14%), Query Frame = 0


Query: 33  MTTSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 92
           M TSSGISIQSAEISDAVQEQVTC QLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA
Sbjct: 1   MATSSGISIQSAEISDAVQEQVTCDQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETA 60

Query: 93  LVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 152
           LVRGCEHAYCATCILRWASYT+KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR
Sbjct: 61  LVRGCEHAYCATCILRWASYTKKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLR 120

Query: 153 ASWYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 212
           ASWYKP I EEREETYD+PEDDQYY YEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA
Sbjct: 121 ASWYKPPIIEEREETYDDPEDDQYYPYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRA 180

Query: 213 GRQEARPVLRQEFTGGPSSSRDPVTKQA-SKDKTGRRAKRALKREAADKAAAAKHQEHLA 272
           GRQEARPVLRQEFT GPSSSR+PVTKQA SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 181 GRQEARPVLRQEFT-GPSSSREPVTKQASSKDKTGRRAKRALKREAADKAAAAKHQEHLA 240

Query: 273 RFGRK 277
           RFGRK
Sbjct: 241 RFGRK 244

[Close]

BLAST of MELO3C014562 vs. ExPASy Swiss-Prot
Match: Q99590 (Protein SCAF11 OS=Homo sapiens OX=9606 GN=SCAF11 PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-05
Identity = 21/60 (35.00%), Postives = 32/60 (53.33%), Query Frame = 0


Query: 79  CAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSI 138
           C ICLN +  +E      C H +C TCIL+WA      +CP  + PF+ +    +L+G +
Sbjct: 41  CPICLNCLLEKEVGFPESCNHVFCMTCILKWAE--TLASCPIDRKPFQAVFKFSALEGYV 98

[Close]

BLAST of MELO3C014562 vs. ExPASy TrEMBL
Match: A0A5D3B8D7 (E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00750 PE=4 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 1.8e-151
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0


Query: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60
           MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 277
           SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of MELO3C014562 vs. ExPASy TrEMBL
Match: A0A1S4DXR5 (uncharacterized protein LOC103491476 OS=Cucumis melo OX=3656 GN=LOC103491476 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.4e-148
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60
           MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 272
           SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 271

[Close]

BLAST of MELO3C014562 vs. ExPASy TrEMBL
Match: A0A5A7V3C1 (E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001490 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145
Identity = 268/271 (98.89%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60
           MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE
Sbjct: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYD+PEDDQYYH  
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDDPEDDQYYH-- 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240

Query: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 272
           SKDKTGRRAKRALKREAADKAAAAKHQEHLA
Sbjct: 241 SKDKTGRRAKRALKREAADKAAAAKHQEHLA 269

[Close]

BLAST of MELO3C014562 vs. ExPASy TrEMBL
Match: A0A0A0KK15 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G431760 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.7e-141
Identity = 264/277 (95.31%), Postives = 268/277 (96.75%), Query Frame = 0


Query: 1   MSSSGISSQSSQLTDAVQGLVLSDQSDKDRRVMTTSSGISIQSAEISDAVQEQVTCHQLE 60
           MSSSGISSQSS+LTDAVQGLVL DQSDKDRR M TSSGISIQSAEISDAVQEQVTC QLE
Sbjct: 1   MSSSGISSQSSELTDAVQGLVLCDQSDKDRRAMATSSGISIQSAEISDAVQEQVTCDQLE 60

Query: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQ 120
           MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYT+KPTCPQ
Sbjct: 61  MGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTKKPTCPQ 120

Query: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPLIFEEREETYDEPEDDQYYHYE 180
           CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKP I EEREETYD+PEDDQYY YE
Sbjct: 121 CKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPPIIEEREETYDDPEDDQYYPYE 180

Query: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQA 240
           DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT GPSSSR+PVTKQA
Sbjct: 181 DDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFT-GPSSSREPVTKQA 240

Query: 241 -SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 277
            SKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK
Sbjct: 241 SSKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK 276

[Close]

BLAST of MELO3C014562 vs. ExPASy TrEMBL
Match: A0A6J1FXD4 (uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC111448431 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 6.7e-111
Identity = 206/240 (85.83%), Postives = 221/240 (92.08%), Query Frame = 0


Query: 35  TSSGISIQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALV 94
           TSSGIS++SAE+SDAVQ+   C Q+EM KK+EIQGTGHGSHDGACAICLNKI+L ETALV
Sbjct: 2   TSSGISLKSAELSDAVQDLKVCDQVEMWKKLEIQGTGHGSHDGACAICLNKISLPETALV 61

Query: 95  RGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRAS 154
           RGCEHAYC TCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRAS
Sbjct: 62  RGCEHAYCTTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRAS 121

Query: 155 WYKPLIFEEREETYDEPEDDQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGR 214
           WY+PLI ++REETYD+PE  +YY YED DEELE+AYLG SPSLRIGNRRWG NGYVRAGR
Sbjct: 122 WYEPLIVKDREETYDDPE--EYYPYEDQDEELEEAYLGASPSLRIGNRRWGDNGYVRAGR 181

Query: 215 QEARPVLRQEFTGGPSSSRDPVTKQASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG 274
           QEARPVLR EF+G  SSSR+P TK ASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG
Sbjct: 182 QEARPVLRPEFSGA-SSSREPTTKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFG 238

[Close]

BLAST of MELO3C014562 vs. TAIR 10
Match: AT5G19430.1 (RING/U-box superfamily protein )

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-66
Identity = 138/249 (55.42%), Postives = 174/249 (69.88%), Query Frame = 0


Query: 41  IQSAEISDAVQEQVTCHQLEMGKKVEIQGTGHGSHDGACAICLNKIALQETALVRGCEHA 100
           +   ++ D +Q+    +Q +   + EI     G+H G CAICL++I LQETA+V+GCEH 
Sbjct: 8   VSEQQVIDGIQDLALQNQDKKKIQEEIHEPSFGNHGGCCAICLSEIPLQETAMVKGCEHT 67

Query: 101 YCATCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPL- 160
           YC TCILRWAS  + PTCPQCKHPF+FL VHR+LDGSI D++FEESVCLLLRASW+ PL 
Sbjct: 68  YCVTCILRWASCKESPTCPQCKHPFDFLSVHRALDGSIEDFLFEESVCLLLRASWFVPLD 127

Query: 161 IFEEREETYDEPED-DQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEAR 220
           + E+   ++   +D D  Y YED+D++L++ YL  S SLRIGNRRWG NG+VR+GRQEAR
Sbjct: 128 VVEQASYSHGYHDDFDIPYDYEDEDDDLDEFYLHGS-SLRIGNRRWGGNGFVRSGRQEAR 187

Query: 221 PVLRQEFTGGPSSSRDPVTKQASKDK-------TGRRAKRALKREAADKA----AAAKHQ 277
           PV R   +G  SSS    +    KDK       TGRRAKRA+KREAA+KA    AAAKH+
Sbjct: 188 PVQRYSGSGSSSSSSSGSSSSEPKDKQVKTTNTTGRRAKRAMKREAANKAAEVTAAAKHE 247

[Close]

BLAST of MELO3C014562 vs. TAIR 10
Match: AT5G19430.2 (RING/U-box superfamily protein )

HSP 1 Score: 249.2 bits (635), Expect = 3.8e-66
Identity = 138/235 (58.72%), Postives = 168/235 (71.49%), Query Frame = 0


Query: 57  HQLEMGKKV--EIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQ 116
           H +   KK+  EI     G+H G CAICL++I LQETA+V+GCEH YC TCILRWAS  +
Sbjct: 7   HNIRDKKKIQEEIHEPSFGNHGGCCAICLSEIPLQETAMVKGCEHTYCVTCILRWASCKE 66

Query: 117 KPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRASWYKPL-IFEEREETYDEPED 176
            PTCPQCKHPF+FL VHR+LDGSI D++FEESVCLLLRASW+ PL + E+   ++   +D
Sbjct: 67  SPTCPQCKHPFDFLSVHRALDGSIEDFLFEESVCLLLRASWFVPLDVVEQASYSHGYHDD 126

Query: 177 -DQYYHYEDDDEELEDAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSS 236
            D  Y YED+D++L++ YL  S SLRIGNRRWG NG+VR+GRQEARPV R   +G  SSS
Sbjct: 127 FDIPYDYEDEDDDLDEFYLHGS-SLRIGNRRWGGNGFVRSGRQEARPVQRYSGSGSSSSS 186

Query: 237 RDPVTKQASKDK-------TGRRAKRALKREAADKA----AAAKHQEHLARFGRK 277
               +    KDK       TGRRAKRA+KREAA+KA    AAAKH+ HL R GRK
Sbjct: 187 SSGSSSSEPKDKQVKTTNTTGRRAKRAMKREAANKAAEVTAAAKHEAHLVRLGRK 240

[Close]

BLAST of MELO3C014562 vs. TAIR 10
Match: AT5G12310.1 (RING/U-box superfamily protein )

HSP 1 Score: 236.1 bits (601), Expect = 3.3e-62
Identity = 128/220 (58.18%), Postives = 160/220 (72.73%), Query Frame = 0


Query: 73  GSHDGACAICLNKIALQETALVRGCEHAYCATCILRWASYTQKPTCPQCKHPFEFLIVHR 132
           G+H G CAICL+ I LQETA+V+GCEHAYC TCILRWASY +KPTCPQCK PF+FL VHR
Sbjct: 37  GNHGGCCAICLDTIPLQETAMVKGCEHAYCVTCILRWASYKEKPTCPQCKLPFDFLNVHR 96

Query: 133 SLDGSIHDYMFEESVCLLLRASWYKPLIFEEREE-----TYDEPEDDQYYHYEDDDEELE 192
           +LDGS+ D+MFEESVCLLLRASW++PL   ER        YD     +Y   ++DD++L+
Sbjct: 97  ALDGSVEDFMFEESVCLLLRASWFQPLEAVERVSDNDNFNYDFDIPPEYEEEDEDDDDLD 156

Query: 193 DAYLGESPSLRIGNRRWGYNGYVRAGRQEARPVLRQEFTGGPSSSRDPVTKQASKDK--- 252
           + Y+ +  SLR+GNRRWG NG+VRAGRQEARPV + +  GG +S  +P +  + + K   
Sbjct: 157 EFYM-QGSSLRLGNRRWGDNGFVRAGRQEARPV-QHKNRGGQASGSEPASSSSCEPKEKT 216

Query: 253 ----TGRRAKRALKREAADKA----AAAKHQEHLARFGRK 277
               TGRRAKRA+KREAA+KA    AAAKH+  L R GRK
Sbjct: 217 SSAITGRRAKRAMKREAANKAAEAVAAAKHEALLVRLGRK 254

The following BLAST results are available for this feature:

BLAST of MELO3C014562 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ96112.1	3.6e-151	100.00	E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_016900768.1	2.9e-148	100.00	PREDICTED: uncharacterized protein LOC103491476 [Cucumis melo]	[more]
KAA0061770.1	3.0e-145	98.89	E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis melo var. makuwa]	[more]
XP_004140197.1	7.6e-141	95.31	uncharacterized protein LOC101206609 isoform X1 [Cucumis sativus] >KGN48101.1 hy...	[more]
XP_011657615.1	2.4e-126	95.92	E3 ubiquitin-protein ligase RNF13 isoform X2 [Cucumis sativus]	[more]

BLAST of MELO3C014562 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99590	2.8e-05	35.00	Protein SCAF11 OS=Homo sapiens OX=9606 GN=SCAF11 PE=1 SV=2	[more]

BLAST of MELO3C014562 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3B8D7	1.8e-151	100.00	E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S4DXR5	1.4e-148	100.00	uncharacterized protein LOC103491476 OS=Cucumis melo OX=3656 GN=LOC103491476 PE=...	[more]
A0A5A7V3C1	1.4e-145	98.89	E3 ubiquitin-protein ligase RNF13 isoform X2 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A0A0KK15	3.7e-141	95.31	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G431760 P...	[more]
A0A6J1FXD4	6.7e-111	85.83	uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]

BLAST of MELO3C014562 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19430.1	1.7e-66	55.42	RING/U-box superfamily protein	[more]
AT5G19430.2	3.8e-66	58.72	RING/U-box superfamily protein	[more]
AT5G12310.1	3.3e-62	58.18	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 79..121 e-value: 9.6E-6 score: 35.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 78..122 e-value: 1.6E-8 score: 34.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 79..122 score: 12.430266
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 66..128 e-value: 1.3E-11 score: 45.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..276
None	No IPR available	PANTHER	PTHR47361:SF4	RING/U-BOX SUPERFAMILY PROTEIN	coord: 44..276
None	No IPR available	PANTHER	PTHR47361	RING/U-BOX SUPERFAMILY PROTEIN	coord: 44..276
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 72..129
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 97..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014562.1	MELO3C014562.1	mRNA