MELO3C014452 (gene) Melon (DHL92) v4

Overview


Name	MELO3C014452
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr05: 2316243 .. 2316707 (+)
RNA-Seq Expression	MELO3C014452
Synteny	MELO3C014452

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATTGGTGCATCCAAATGTTGTTCTTATACTCAGATTTTGGCACACATTTGTCCAAGCAACAAACAATCACAAGACATCTCGTATCGTCAAAAACAAGCACGTCCAGACTACGTTCACAACGAGGTGCAAGCCCATCTGAGTACGTCAACTCGACATCCCACCTCACTTTTCGCCCAATGGTCGGACGTGGCATTCCGACGAAACCCGTCCACCAAGCATAAAACAATTGCAAGACATCTCGTATCCTCACAGACAAGCACGTCCAGAGACTACGGCCACAACAAGGTGCAAGCATTATCCAAGCAAGCCCATCCGAGCATCAATTCAACATCCCGCTCTCACTCCCTGCCCGACGTACAAGCCCGTCATTCTGGTCAAACCTCTCCACCAAGCACGAAGCAATTGCAAGACAAGCACGCCCAAACTAAGTGCTTCTCCAATGATTTGTTGATATTTTAG

mRNA sequence

ATGACAATTGGTGCATCCAAATGTTGTTCTTATACTCAGATTTTGGCACACATTTGTCCAAGCAACAAACAATCACAAGACATCTCGTATCGTCAAAAACAAGCACGTCCAGACTACGTTCACAACGAGGTGCAAGCCCATCTGAGTACGTCAACTCGACATCCCACCTCACTTTTCGCCCAATGGTCGGACGTGGCATTCCGACGAAACCCGTCCACCAAGCATAAAACAATTGCAAGACATCTCGTATCCTCACAGACAAGCACGTCCAGAGACTACGGCCACAACAAGGTGCAAGCATTATCCAAGCAAGCCCATCCGAGCATCAATTCAACATCCCGCTCTCACTCCCTGCCCGACGTACAAGCCCGTCATTCTGGTCAAACCTCTCCACCAAGCACGAAGCAATTGCAAGACAAGCACGCCCAAACTAAGTGCTTCTCCAATGATTTGTTGATATTTTAG

Coding sequence (CDS)

ATGACAATTGGTGCATCCAAATGTTGTTCTTATACTCAGATTTTGGCACACATTTGTCCAAGCAACAAACAATCACAAGACATCTCGTATCGTCAAAAACAAGCACGTCCAGACTACGTTCACAACGAGGTGCAAGCCCATCTGAGTACGTCAACTCGACATCCCACCTCACTTTTCGCCCAATGGTCGGACGTGGCATTCCGACGAAACCCGTCCACCAAGCATAAAACAATTGCAAGACATCTCGTATCCTCACAGACAAGCACGTCCAGAGACTACGGCCACAACAAGGTGCAAGCATTATCCAAGCAAGCCCATCCGAGCATCAATTCAACATCCCGCTCTCACTCCCTGCCCGACGTACAAGCCCGTCATTCTGGTCAAACCTCTCCACCAAGCACGAAGCAATTGCAAGACAAGCACGCCCAAACTAAGTGCTTCTCCAATGATTTGTTGATATTTTAG

Protein sequence

MTIGASKCCSYTQILAHICPSNKQSQDISYRQKQARPDYVHNEVQAHLSTSTRHPTSLFAQWSDVAFRRNPSTKHKTIARHLVSSQTSTSRDYGHNKVQALSKQAHPSINSTSRSHSLPDVQARHSGQTSPPSTKQLQDKHAQTKCFSNDLLIF

Homology

[Close]

BLAST of MELO3C014452 vs. NCBI nr
Match: TYK03168.1 (hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-11
Identity = 71/183 (38.80%), Postives = 82/183 (44.81%), Query Frame = 0


Query: 27  DISYRQKQARPDYVHNEVQAHLSTSTRH--PTSLFAQWSDVAFRRNPSTKHKTIARHLVS 86
           D +   + ARP    + VQA L     H  P SL  Q S+VA RRNPST+HK IARHLVS
Sbjct: 107 DTNKPARSARPHRGASIVQAKLIRVREHDIPLSLPVQQSNVALRRNPSTEHKEIARHLVS 166

Query: 87  SQTSTSRDYGHNKVQALSKQAHPSINS--------------------------------- 146
           S+ S    Y + +VQALS QAHPSINS                                 
Sbjct: 167 SRISPLGVYAYIEVQALSLQAHPSINSTLALTPCPTNKPIVMAKPLHQARSNRKKSPLGV 226

[Close]

BLAST of MELO3C014452 vs. NCBI nr
Match: KAE8637138.1 (hypothetical protein CSA_015445 [Cucumis sativus] >KAE8637435.1 hypothetical protein CSA_004613 [Cucumis sativus] >KAE8637437.1 hypothetical protein CSA_004615 [Cucumis sativus])

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-09
Identity = 55/117 (47.01%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 21  SNKQSQDISYRQKQARPDYVHNEV-----QAHLSTSTR------HPTSLFAQWSDVAFRR 80
           S KQSQ IS+ Q+QA P+  HN+V     QA  STSTR      HPT  F +     FR 
Sbjct: 165 SKKQSQVISHPQEQASPNNAHNKVQASSKQARPSTSTRLPALTPHPT--FGE--KPTFRP 224

Query: 81  NPSTKHKTIARHLVSSQTSTSRDYGHNKVQALSKQAHPSINSTSRSHSLPDVQARHS 127
           NPSTK + I RHLVSS+TS  +         +       INSTSRSHS P+V A+HS
Sbjct: 225 NPSTKQEAIERHLVSSRTSEPKRRPQQSASIIQASPSKHINSTSRSHSPPEVGAQHS 277

[Close]

BLAST of MELO3C014452 vs. NCBI nr
Match: TYK21002.1 (hypothetical protein E5676_scaffold328G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 5.7e-05
Identity = 48/114 (42.11%), Postives = 54/114 (47.37%), Query Frame = 0


Query: 29  SYRQKQARPDYVHNEVQAHLSTSTRHPTSLFAQWSDVAFRRNPSTKHKTIARHLVSSQTS 88
           S R  QARP    N     L      PT  F Q      + NPST  + I RHL+S +TS
Sbjct: 34  SSRIIQARPSKYINSTSHSLPARCTGPT--FHQ-----LQPNPSTNQEAIPRHLLSPRTS 93

Query: 89  TSRDYGHNKVQALSKQAHPSINSTSRSHSLPDVQAR---HSGQTSPPSTKQLQD 140
           T R         +       I STSRSHS PDV  R   HS QT PP+ KQLQD
Sbjct: 94  TLRIRSQRDASIIQASPSKFIKSTSRSHSPPDVGVRYSIHSNQTLPPNKKQLQD 140

[Close]

BLAST of MELO3C014452 vs. NCBI nr
Match: KAA0057592.1 (hypothetical protein E6C27_scaffold497G00670 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 5.7e-05
Identity = 48/114 (42.11%), Postives = 54/114 (47.37%), Query Frame = 0


Query: 29  SYRQKQARPDYVHNEVQAHLSTSTRHPTSLFAQWSDVAFRRNPSTKHKTIARHLVSSQTS 88
           S R  QARP    N     L      PT  F Q      + NPST  + I RHL+S +TS
Sbjct: 132 SSRIIQARPSKYINSTSHSLPARCTGPT--FHQ-----LQPNPSTNQEAIPRHLLSPRTS 191

Query: 89  TSRDYGHNKVQALSKQAHPSINSTSRSHSLPDVQAR---HSGQTSPPSTKQLQD 140
           T R         +       I STSRSHS PDV  R   HS QT PP+ KQLQD
Sbjct: 192 TLRIRSQRDASIIQASPSKFIKSTSRSHSPPDVGVRYSIHSNQTLPPNKKQLQD 238

[Close]

BLAST of MELO3C014452 vs. NCBI nr
Match: KAE8649393.1 (hypothetical protein Csa_011819, partial [Cucumis sativus])

HSP 1 Score: 57.8 bits (138), Expect = 9.8e-05
Identity = 37/84 (44.05%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 55  PTSLFAQWSDVAFRRNPSTKHKTIARHLVSSQTSTSRDYGHNKVQALSKQAHPSINSTSR 114
           P SL  +     FR NPS K + IA HLV S+TS  +         +       INSTSR
Sbjct: 35  PLSLPTRRRGATFRPNPSAKKEVIASHLVFSRTSKPKRRPQQSASIIQASPSKHINSTSR 94

Query: 115 SHSLPDVQARHSGQTSPPSTKQLQ 139
           S S PDV+AR+  QT P +TKQ Q
Sbjct: 95  SRSPPDVKARYFDQTLPTTTKQSQ 118

[Close]

BLAST of MELO3C014452 vs. ExPASy TrEMBL
Match: A0A5D3BW21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00500 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.2e-11
Identity = 71/183 (38.80%), Postives = 82/183 (44.81%), Query Frame = 0


Query: 27  DISYRQKQARPDYVHNEVQAHLSTSTRH--PTSLFAQWSDVAFRRNPSTKHKTIARHLVS 86
           D +   + ARP    + VQA L     H  P SL  Q S+VA RRNPST+HK IARHLVS
Sbjct: 107 DTNKPARSARPHRGASIVQAKLIRVREHDIPLSLPVQQSNVALRRNPSTEHKEIARHLVS 166

Query: 87  SQTSTSRDYGHNKVQALSKQAHPSINS--------------------------------- 146
           S+ S    Y + +VQALS QAHPSINS                                 
Sbjct: 167 SRISPLGVYAYIEVQALSLQAHPSINSTLALTPCPTNKPIVMAKPLHQARSNRKKSPLGV 226

[Close]

BLAST of MELO3C014452 vs. ExPASy TrEMBL
Match: A0A5A7UP03 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00670 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.8e-05
Identity = 48/114 (42.11%), Postives = 54/114 (47.37%), Query Frame = 0


Query: 29  SYRQKQARPDYVHNEVQAHLSTSTRHPTSLFAQWSDVAFRRNPSTKHKTIARHLVSSQTS 88
           S R  QARP    N     L      PT  F Q      + NPST  + I RHL+S +TS
Sbjct: 132 SSRIIQARPSKYINSTSHSLPARCTGPT--FHQ-----LQPNPSTNQEAIPRHLLSPRTS 191

Query: 89  TSRDYGHNKVQALSKQAHPSINSTSRSHSLPDVQAR---HSGQTSPPSTKQLQD 140
           T R         +       I STSRSHS PDV  R   HS QT PP+ KQLQD
Sbjct: 192 TLRIRSQRDASIIQASPSKFIKSTSRSHSPPDVGVRYSIHSNQTLPPNKKQLQD 238

[Close]

BLAST of MELO3C014452 vs. ExPASy TrEMBL
Match: A0A5D3DBP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00310 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.8e-05
Identity = 48/114 (42.11%), Postives = 54/114 (47.37%), Query Frame = 0


Query: 29  SYRQKQARPDYVHNEVQAHLSTSTRHPTSLFAQWSDVAFRRNPSTKHKTIARHLVSSQTS 88
           S R  QARP    N     L      PT  F Q      + NPST  + I RHL+S +TS
Sbjct: 34  SSRIIQARPSKYINSTSHSLPARCTGPT--FHQ-----LQPNPSTNQEAIPRHLLSPRTS 93

Query: 89  TSRDYGHNKVQALSKQAHPSINSTSRSHSLPDVQAR---HSGQTSPPSTKQLQD 140
           T R         +       I STSRSHS PDV  R   HS QT PP+ KQLQD
Sbjct: 94  TLRIRSQRDASIIQASPSKFIKSTSRSHSPPDVGVRYSIHSNQTLPPNKKQLQD 140

[Close]

BLAST of MELO3C014452 vs. ExPASy TrEMBL
Match: A0A5A7SSW5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001570 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.2e-04
Identity = 35/71 (49.30%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 63  SDVAFRRNPSTKHKTIARHLVSSQTSTSRDYGHNKVQALSKQAHPSINSTSRSHSLPDVQ 122
           SDVA R NPSTKHK IA  LVS +TST R         +       INSTSRSHS PD +
Sbjct: 12  SDVALRSNPSTKHKVIASPLVSPRTSTPRLCQQQGTSIIRPSPSEYINSTSRSHSPPDDR 71

Query: 123 ARHSGQTSPPS 134
             HS   +  S
Sbjct: 72  TWHSNDVNTSS 82

The following BLAST results are available for this feature:

BLAST of MELO3C014452 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03168.1	2.4e-11	38.80	hypothetical protein E5676_scaffold11G00500 [Cucumis melo var. makuwa]	[more]
KAE8637138.1	1.0e-09	47.01	hypothetical protein CSA_015445 [Cucumis sativus] >KAE8637435.1 hypothetical pro...	[more]
TYK21002.1	5.7e-05	42.11	hypothetical protein E5676_scaffold328G00310 [Cucumis melo var. makuwa]	[more]
KAA0057592.1	5.7e-05	42.11	hypothetical protein E6C27_scaffold497G00670 [Cucumis melo var. makuwa]	[more]
KAE8649393.1	9.8e-05	44.05	hypothetical protein Csa_011819, partial [Cucumis sativus]	[more]

BLAST of MELO3C014452 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C014452 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BW21	1.2e-11	38.80	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UP03	2.8e-05	42.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DBP5	2.8e-05	42.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SSW5	5.2e-04	49.30	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO3C014452 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014452.1	MELO3C014452.1	mRNA