MELO3C014337 (gene) Melon (DHL92) v4

Overview


Name	MELO3C014337
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	chloroplast stem-loop binding protein of 41 kDa a, chloroplastic
Location	chr05: 3774599 .. 3778637 (-)
RNA-Seq Expression	MELO3C014337
Synteny	MELO3C014337

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCCCACAGATTTCCTTCTAACAATTATTTGATTCCATGGCTGCTCTTCCTTTCTCATCTTCCCTTTTCTCTTCCAAGCCTTCCATCTATTTCCCATCTCCTATTTCTCCTTCTTTTACTCCTCTTTCACTTTCTCCAATCTCTAACTCTTCTCCTATTTCTTCTTCTTTCTCCATTTCCCATTCTAATTTTCTCTCCAATTACTCTTCGTCTTCTTCTTCTTTTAGACCCTCCACTGTCTGTTCCTTTAGTGTCAGGGCTAGCTCTTCTACCAAGAAGAAGGTGTTGATTGTCAACACAAACAGCGGTGGGCATGCTGTCATTGGCTTCTATTTTGCTAAAGAGCTTCTGGGTTCTGGCCATGAAGTCACGATTCTCACTGTGGGTGAACAGAGTTCTGATAAGATGAACAAACCCCCTTTCAACAGATTCTCTGTTAGTAATTCTAAACCTTTTCTTTTACATGGTTTTTCGTTTCTGTATTCTCTAACATTCATAGTCTAGGGAGATCCAAAATCAGTGGTTGTTAACTGTTCCTGATCTATCCATGTTTGATTGACAATTCACATTCACATTCTGTTTTTTCGTTTGAAGACTGTTTCCCAAATTCTTAAAAAAGCTATTTTTATGCTTCATTGTATCATGATTTTTAATGGTAAATTTTAGGAGGGAAATAGGTTTTAATAAAATATTTACAAAATATAAAAAAAATTCAAATTCTATTAATGGTAGACATTGATAGAACTAATATACTTCTATCAACATGATTGATAGACAGTAATAGAAGTATATCAGTATTATTATTAATAGAATCCAAAATTTTACTATATATTAATAAATATTTTAGTATATTTTAACATATTTAAAAATGTCTCACTTAAAGATGTAGAATTATATTAAAAAAGTTATTGCAAATGATAAATTCTTAAAAATATTTACAATTGTAGCAACTAATTAGAGATACATCGATAGAAGTCTATGAGTATATGTTGTTAATAAATCTCAAATTCTATTATTTTTAAAAATTAATTTGGTTCAATTTTCTATTCGTGAAAATAAGCCATTATATTAAAATAAAGATAAAAACATTTTTGAGATAAAAGAATGTATATATATATATATATTAAAAGTAATATAATGTATTACACAATGTATTATAAATTGTATAACACAAAATAATAATTATATAAGTTTTTCAAATATAAATCATATTTCTATTTGTGATAGTTTAATGTCTACTAAATATTAAATATTAGTAGTAATCGGATGATTTACAAATATATAGTACCAAATACATTTTAAATAATTGTTTATATTAGAATTTAATTTCTAAATGTATTGTTCACATAGTAGATATAAAAAAATGAAATACAATTATGTTTTTTCAAAGTCTCTATCAAACATGTTTTTATTCAAAATAATAGATTCAATGAAGACATAGTTATATCATTGCTTTTAAATTCTCTACCAAACAAGCTCTTAAATCATTGATTGATCTAAAAATTAAATCGATGAATAAATGGGGATGGTGTGTTAGGAAATTGTGAGTGGTGGAGGCAAGACCGTATGGGGAGATCCAGCTGAAATTGGGAAGGTTCTTGAAGGAGCATCATTTGATGTGGTATTAGATAACAATGGCAAGGACATTGATACTGTGAGGTTTGTGAAATTTTACTTCTTTTCTCTCATCCTTTCTAGTTGTTTGTGTGATATTCTATACATTTAAAGAAAAAATACTTGGATGTATTTATAACTTGTGTGACAGATTTTGCTTTTTGGTTCCTTTATATGAGTGGTGAGAAGGGATTTACAAAATAAGCGATGTCTGGAATGCATCTAAGTATTACCCTTTAAGAATTTAATAGGTTTTTATTAATATCAACCCACCTTTCAAGTATTAAAATAAAATATCTGTTTATGGAGGATGAAGGTATCCGAAGAAATGGTGAGTAAGAATCGAATACACTAGCAAATTGATCTTACAACTAGATACAGTAGTTACATTACACACCGTTGTCAAATTAAAAAATTACAGTACACACTATGTTTACAATACCCACATAATAATATTCAGACTCAAAAAGTAAGTAAAACGATATAACAAGACTTATAAATTGAAAGAACTAGAAAATCTTAAGATCTTGTAGAAACATCAACAAGTAATTGAGGCACGATTTTGATAAGTTTGTCCTAAAGACAATTATTCATTATACACGAGTTGGAAACAAACTACAGCGACCATCAATGGATTGCATCGAATTGTTATTTATAGGTTAGTAAATAAGTAACTATCTAAATTAAGAAATAAAATCAGATAAATGCAAAATTAGAGCACCCAATTGAGATATCATTTGAACAAAATCAAAGTACATAAATCATTCAGATGGAAGAAACTACGTATATAACACGTGAGGAAAGTTCAATATATAAACTAAACATCGTATGATTTGATGGGTCAATCTAACTGAAAATTTTACCCATAAATTCAATCTACATACTAAATCCTTGTAATTTTTCATATCTTTCACAACATTATTAAAAACCATCATGAGAAATTCACATAGCAGACAAACCAAAACATGAAGGATACTCTTTGTTACAAAAATTTTTGCAAGGCAAGAAGATTTAAACCTTAAAAATCAACTACAACCATGCTATAATTCTATCTAAGCTGCCAATTGACCTATATCTTTGACACAGGCCTGTTATTGATTGGGCAAAGAGCTCCGGTGTGAAGCAGTTTCTATTTATCAGCAGTGCTGGAATCTATAAGCCAACTGATGAGCCTCCCCATGTTGAAGGGGTAAACATTACAGTTTCAATATGATCCTATCAGCATATATAATATATAGATTTAAATTTACATTACATTTTCTCAGCCAACAAGGTAAACACTTACAGAATGTTAATCTGCATCATTACTGTGACAGGATCTTGTTAAAGCTGACGCTGGCCATGTTGGTGTTGAGAAATATATGGCGGAGGTTTTCAGCAGCTGGGCTATCTTCCGTCCACAATACATGATTGGATCTGGCAACAACAAAGATTGTGAAGAGTGGTTCTTTGACAGTAAGAGCACACATCTTTATAAACCTGTAAAGTATTTAGACATATCTAACCTTGATTGATGAGTCATGGACTTGATAAATCCTCGATGTAGGAATTGTCCGGGACAGACCGATTCCAATTCCAGGCTCTGGTATGCAGCTGACAAACATCGCACATGTCAGGGACTTGTCTTCCATGTTAACACTAGCTGTAGAGAAGCCGGATGAAGCACACTCTAACATATTCAACTGCGTAACCGATCGAGCAGTGACTCTTGATGGAATGGCCAAGCTATGTGCTCAAGCAGCAGGTCGTCCTGTTAACATAGTGCATTATGATCCAAAAGCAGTTGGGGTTGATGCAAAGAAAGCTTTTCCTTTCAGGAATATGGTGAGTACATAAAATGAAATGGTTCCTTTGCTGCTCTGTTTGAGAAAACTGAAGATTAAAGTGAACAAAAAAAAAAAAAAAAAAAAAAGTTAGATATCAACTCTAAGATATTTGTACCTTTTTTCTGTAGCATTTCTATGCAGAACCAAGAGCAGCCCAGGAGATTTTAGGGTGGAAAAGCACCACAAATCTTCCTGAAGATTTGAAGGAACGATTTGAAGAGTATGTGAAGATTGGTAGAGACAAGAAAGCTATTAAGTTTGAATTAGATGATAAGATACTTGAGTCCTTAAAAGTTCCAGTAGCTGCTTAACCCTTCGGATAATTGTGCAAAACATAGCACTCCAAATCTTACAGTACTTTTGTATATGTATTCTCATTTATTGTACTTCTATCAACTTACCAAAATAAAATGATTTTGAGAGCTGAAGTTTGTTCCCTCATTTCTTATTTTTTGTATTTATAGAAGAAACCAAAGAAAGTAGTATAGATTGCATATATTCCCAGGCTCTCTAGCTCTCTACCAAACAAATGTGGATAATGTACCGGCAGTTCTAATTCATTTCTGGTAAAATATATCAAAGTAAACATTGCACTCT

mRNA sequence

ATCTCCCACAGATTTCCTTCTAACAATTATTTGATTCCATGGCTGCTCTTCCTTTCTCATCTTCCCTTTTCTCTTCCAAGCCTTCCATCTATTTCCCATCTCCTATTTCTCCTTCTTTTACTCCTCTTTCACTTTCTCCAATCTCTAACTCTTCTCCTATTTCTTCTTCTTTCTCCATTTCCCATTCTAATTTTCTCTCCAATTACTCTTCGTCTTCTTCTTCTTTTAGACCCTCCACTGTCTGTTCCTTTAGTGTCAGGGCTAGCTCTTCTACCAAGAAGAAGGTGTTGATTGTCAACACAAACAGCGGTGGGCATGCTGTCATTGGCTTCTATTTTGCTAAAGAGCTTCTGGGTTCTGGCCATGAAGTCACGATTCTCACTGTGGGTGAACAGAGTTCTGATAAGATGAACAAACCCCCTTTCAACAGATTCTCTGAAATTGTGAGTGGTGGAGGCAAGACCGTATGGGGAGATCCAGCTGAAATTGGGAAGGTTCTTGAAGGAGCATCATTTGATGTGGTATTAGATAACAATGGCAAGGACATTGATACTGTGAGGCCTGTTATTGATTGGGCAAAGAGCTCCGGTGTGAAGCAGTTTCTATTTATCAGCAGTGCTGGAATCTATAAGCCAACTGATGAGCCTCCCCATGTTGAAGGGGATCTTGTTAAAGCTGACGCTGGCCATGTTGGTGTTGAGAAATATATGGCGGAGGTTTTCAGCAGCTGGGCTATCTTCCGTCCACAATACATGATTGGATCTGGCAACAACAAAGATTGTGAAGAGTGGTTCTTTGACAGAATTGTCCGGGACAGACCGATTCCAATTCCAGGCTCTGGTATGCAGCTGACAAACATCGCACATGTCAGGGACTTGTCTTCCATGTTAACACTAGCTGTAGAGAAGCCGGATGAAGCACACTCTAACATATTCAACTGCGTAACCGATCGAGCAGTGACTCTTGATGGAATGGCCAAGCTATGTGCTCAAGCAGCAGGTCGTCCTGTTAACATAGTGCATTATGATCCAAAAGCAGTTGGGGTTGATGCAAAGAAAGCTTTTCCTTTCAGGAATATGCATTTCTATGCAGAACCAAGAGCAGCCCAGGAGATTTTAGGGTGGAAAAGCACCACAAATCTTCCTGAAGATTTGAAGGAACGATTTGAAGAGTATGTGAAGATTGGTAGAGACAAGAAAGCTATTAAGTTTGAATTAGATGATAAGATACTTGAGTCCTTAAAAGTTCCAGTAGCTGCTTAACCCTTCGGATAATTGTGCAAAACATAGCACTCCAAATCTTACAGTACTTTTGTATATGTATTCTCATTTATTGTACTTCTATCAACTTACCAAAATAAAATGATTTTGAGAGCTGAAGTTTGTTCCCTCATTTCTTATTTTTTGTATTTATAGAAGAAACCAAAGAAAGTAGTATAGATTGCATATATTCCCAGGCTCTCTAGCTCTCTACCAAACAAATGTGGATAATGTACCGGCAGTTCTAATTCATTTCTGGTAAAATATATCAAAGTAAACATTGCACTCT

Coding sequence (CDS)

ATGGCTGCTCTTCCTTTCTCATCTTCCCTTTTCTCTTCCAAGCCTTCCATCTATTTCCCATCTCCTATTTCTCCTTCTTTTACTCCTCTTTCACTTTCTCCAATCTCTAACTCTTCTCCTATTTCTTCTTCTTTCTCCATTTCCCATTCTAATTTTCTCTCCAATTACTCTTCGTCTTCTTCTTCTTTTAGACCCTCCACTGTCTGTTCCTTTAGTGTCAGGGCTAGCTCTTCTACCAAGAAGAAGGTGTTGATTGTCAACACAAACAGCGGTGGGCATGCTGTCATTGGCTTCTATTTTGCTAAAGAGCTTCTGGGTTCTGGCCATGAAGTCACGATTCTCACTGTGGGTGAACAGAGTTCTGATAAGATGAACAAACCCCCTTTCAACAGATTCTCTGAAATTGTGAGTGGTGGAGGCAAGACCGTATGGGGAGATCCAGCTGAAATTGGGAAGGTTCTTGAAGGAGCATCATTTGATGTGGTATTAGATAACAATGGCAAGGACATTGATACTGTGAGGCCTGTTATTGATTGGGCAAAGAGCTCCGGTGTGAAGCAGTTTCTATTTATCAGCAGTGCTGGAATCTATAAGCCAACTGATGAGCCTCCCCATGTTGAAGGGGATCTTGTTAAAGCTGACGCTGGCCATGTTGGTGTTGAGAAATATATGGCGGAGGTTTTCAGCAGCTGGGCTATCTTCCGTCCACAATACATGATTGGATCTGGCAACAACAAAGATTGTGAAGAGTGGTTCTTTGACAGAATTGTCCGGGACAGACCGATTCCAATTCCAGGCTCTGGTATGCAGCTGACAAACATCGCACATGTCAGGGACTTGTCTTCCATGTTAACACTAGCTGTAGAGAAGCCGGATGAAGCACACTCTAACATATTCAACTGCGTAACCGATCGAGCAGTGACTCTTGATGGAATGGCCAAGCTATGTGCTCAAGCAGCAGGTCGTCCTGTTAACATAGTGCATTATGATCCAAAAGCAGTTGGGGTTGATGCAAAGAAAGCTTTTCCTTTCAGGAATATGCATTTCTATGCAGAACCAAGAGCAGCCCAGGAGATTTTAGGGTGGAAAAGCACCACAAATCTTCCTGAAGATTTGAAGGAACGATTTGAAGAGTATGTGAAGATTGGTAGAGACAAGAAAGCTATTAAGTTTGAATTAGATGATAAGATACTTGAGTCCTTAAAAGTTCCAGTAGCTGCTTAA

Protein sequence

MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSSSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA

Homology

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BLAST of MELO3C014337 vs. NCBI nr
Match: XP_008449375.1 (PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucumis melo] >KAA0057389.1 chloroplast stem-loop binding protein of 41 kDa a [Cucumis melo var. makuwa] >TYK30086.1 chloroplast stem-loop binding protein of 41 kDa a [Cucumis melo var. makuwa])

HSP 1 Score: 804.7 bits (2077), Expect = 3.7e-229
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60
           MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS
Sbjct: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60

Query: 61  SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS 120
           SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS
Sbjct: 61  SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS 120

Query: 121 SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA 180
           SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA
Sbjct: 121 SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA 180

Query: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI 240
           KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI
Sbjct: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI 240

Query: 241 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN 300
           GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN
Sbjct: 241 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN 300

Query: 301 CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL 360
           CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL
Sbjct: 301 CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL 360

Query: 361 GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA
Sbjct: 361 GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 407

[Close]

BLAST of MELO3C014337 vs. NCBI nr
Match: XP_004140080.1 (chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucumis sativus] >KGN47858.1 hypothetical protein Csa_003015 [Cucumis sativus])

HSP 1 Score: 762.3 bits (1967), Expect = 2.1e-216
Identity = 390/409 (95.35%), Postives = 396/409 (96.82%), Query Frame = 0


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYS--S 60
           MAALPFSSSLFSSKPSIYFPS ISPSF   SLSPISNSSPISSSFSISHSNFLSNYS  S
Sbjct: 1   MAALPFSSSLFSSKPSIYFPSSISPSFPHPSLSPISNSSPISSSFSISHSNFLSNYSSFS 60

Query: 61  SSSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGE 120
           SSSSFRPSTV SFSVRASSS KKKVLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGE
Sbjct: 61  SSSSFRPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGE 120

Query: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVID 180
           QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKV+EGASFDVVLDNNGKDIDTVRPVID
Sbjct: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVID 180

Query: 181 WAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQY 240
           WAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVEKY+AEVFSSWA+FRPQY
Sbjct: 181 WAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQY 240

Query: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300
           MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI
Sbjct: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300

Query: 301 FNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360
           FNCV+ RAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE
Sbjct: 301 FNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360

Query: 361 ILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           ILGW+ TTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESL VPVAA
Sbjct: 361 ILGWEGTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLNVPVAA 409

[Close]

BLAST of MELO3C014337 vs. NCBI nr
Match: XP_038888331.1 (chloroplast stem-loop binding protein of 41 kDa a, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 721.8 bits (1862), Expect = 3.2e-204
Identity = 368/407 (90.42%), Postives = 383/407 (94.10%), Query Frame = 0


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60
           MAAL  SSSLFSSKPSI+ PS +SPSF  LSLSPIS+ SP+SSS SISHS FL     S 
Sbjct: 1   MAALASSSSLFSSKPSIHLPSSLSPSFPLLSLSPISHPSPLSSSLSISHS-FL-----SY 60

Query: 61  SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS 120
            SFRPS VCSFSVRA+S  KKKVLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGE+S
Sbjct: 61  PSFRPSNVCSFSVRATSLDKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEES 120

Query: 121 SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA 180
           SDKM KPPFNRFSEIVSGGGKTVWGDPAEIGKV+ GASFDVVLDNNGKDIDTVRPVIDWA
Sbjct: 121 SDKMKKPPFNRFSEIVSGGGKTVWGDPAEIGKVVAGASFDVVLDNNGKDIDTVRPVIDWA 180

Query: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI 240
           KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKY+AEVF SWAIFRPQYMI
Sbjct: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYIAEVFGSWAIFRPQYMI 240

Query: 241 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN 300
           GSGNNKDCEEWFFDRIVR+RP+PIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN
Sbjct: 241 GSGNNKDCEEWFFDRIVRNRPVPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN 300

Query: 301 CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL 360
           CV+DRAVTLDGMAKLCAQAAGRPV+IVH+DPKAVGVDAKKAFPFRNMHFYAEPRAAQ+IL
Sbjct: 301 CVSDRAVTLDGMAKLCAQAAGRPVDIVHFDPKAVGVDAKKAFPFRNMHFYAEPRAAQDIL 360

Query: 361 GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           GWK TTNLPEDLKERFEEYVKIGRDKK IKFELDDKILESLKVPVAA
Sbjct: 361 GWKGTTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLKVPVAA 401

[Close]

BLAST of MELO3C014337 vs. NCBI nr
Match: XP_022963688.1 (chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucurbita moschata])

HSP 1 Score: 703.4 bits (1814), Expect = 1.2e-198
Identity = 361/408 (88.48%), Postives = 381/408 (93.38%), Query Frame = 0


Query: 1   MAAL-PFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSS 60
           MAAL   SSSLF+SKPSI+ PS +SP     SLSPIS+SS ++SSF+ISHS FL   SSS
Sbjct: 1   MAALASSSSSLFTSKPSIHLPSSLSPCLLRSSLSPISSSSALTSSFAISHS-FLPFPSSS 60

Query: 61  SSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQ 120
               R S VCSFSVRASS+ KK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGE+
Sbjct: 61  ----RRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEE 120

Query: 121 SSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDW 180
           SSDKM KPPFNRFSEIVS GGKTVWGDPAE+GKV+ GASFDVVLDNNGKDID+VRPVIDW
Sbjct: 121 SSDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDW 180

Query: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYM 240
           AKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+Y+AEVFSSWA+FRPQYM
Sbjct: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYM 240

Query: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIF 300
           IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNI+HVRDLSSMLTLAVEKPDEAH+NIF
Sbjct: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVRDLSSMLTLAVEKPDEAHANIF 300

Query: 301 NCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI 360
           NCV+DRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI
Sbjct: 301 NCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI 360

Query: 361 LGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           LGWKS+TNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA
Sbjct: 361 LGWKSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 403

[Close]

BLAST of MELO3C014337 vs. NCBI nr
Match: XP_022967430.1 (chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucurbita maxima])

HSP 1 Score: 699.5 bits (1804), Expect = 1.7e-197
Identity = 359/408 (87.99%), Postives = 379/408 (92.89%), Query Frame = 0


Query: 1   MAAL-PFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSS 60
           MAAL   SSSLF+SKPSI+ PS +SP     S+SPIS+ S ++SSF+ISHS FL   SSS
Sbjct: 1   MAALASSSSSLFTSKPSIHLPSSLSPCLLRSSVSPISSPSALTSSFAISHS-FLPFPSSS 60

Query: 61  SSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQ 120
               R S VCSFSVRASS+ KK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGE+
Sbjct: 61  ----RRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEE 120

Query: 121 SSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDW 180
           SSDKM KPPFNRFSEIVS GGKTVWGDPAE+GKV+ GASFDVVLDNNGKDID+VRPVIDW
Sbjct: 121 SSDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDW 180

Query: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYM 240
           AKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+Y+AEVFSSWA+FRPQYM
Sbjct: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYM 240

Query: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIF 300
           IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAH+NIF
Sbjct: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIF 300

Query: 301 NCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI 360
           NCV+DRAVTLDGMAKLCAQAAGRPVNIVHYDPK VGVDAKKAFPFRNMHFYAEPRAAQEI
Sbjct: 301 NCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEI 360

Query: 361 LGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           LGWKS+TNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA
Sbjct: 361 LGWKSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 403

[Close]

BLAST of MELO3C014337 vs. ExPASy Swiss-Prot
Match: Q9LYA9 (Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CSP41A PE=1 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 8.0e-166
Identity = 309/411 (75.18%), Postives = 341/411 (82.97%), Query Frame = 0


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60
           MAAL  SS  FSSK +    SPIS    P SL   S  S  SSSFS   S+  S+ S  +
Sbjct: 1   MAALSSSSLFFSSKTT----SPISNLLIPPSLHRFSLPSS-SSSFSSLSSSSSSSSSLLT 60

Query: 61  SSFRPSTVCS---FSVRASS-STKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTV 120
            S R S   S   F+V+ASS   KK VLIVNTNSGGHAVIGFYFAKELL +GH VTILTV
Sbjct: 61  FSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTV 120

Query: 121 GEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPV 180
           G++SS+KM KPPFNRFSEIVSGGGKTVWG+PA +  V+ G +FDVVLDNNGKD+DTVRPV
Sbjct: 121 GDESSEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPV 180

Query: 181 IDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRP 240
           +DWAKSSGVKQFLFISSAGIYK T++PPHVEGD VKADAGHV VEKY+AE F +WA FRP
Sbjct: 181 VDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRP 240

Query: 241 QYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHS 300
           QYMIGSGNNKDCEEWFFDRIVRDR +PIPGSG+QLTNI+HVRDLSSMLT AV  P+ A  
Sbjct: 241 QYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASG 300

Query: 301 NIFNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAA 360
           NIFNCV+DRAVTLDGMAKLCA AAG+ V IVHYDPKA+GVDAKKAF FRNMHFYAEPRAA
Sbjct: 301 NIFNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAA 360

Query: 361 QEILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           +++LGW+S TNLPEDLKERFEEYVKIGRDKK IKFELDDKILE+LK PVAA
Sbjct: 361 KDLLGWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPVAA 406

[Close]

BLAST of MELO3C014337 vs. ExPASy Swiss-Prot
Match: Q9SA52 (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CSP41B PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.5e-50
Identity = 121/334 (36.23%), Postives = 177/334 (52.99%), Query Frame = 0


Query: 76  SSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQSSDKM----NKPPFNR 135
           S+S++KK+LI+    GG   IG + ++ L+  GH+VT+ T G+    K     +   F  
Sbjct: 49  SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFAD 108

Query: 136 FSEIV---SGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQF 195
           FS  +    G  K    D   +   L    FDVV D NG++ + V P+++      ++Q+
Sbjct: 109 FSSKILHLKGDRK----DYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQY 168

Query: 196 LFISSAGIYKPTDEPPHVEGDLVKADAGHVG---VEKYMAEVFSSWAIFRPQYMIGSGNN 255
           ++ SSAG+Y  +D  PH E D V   + H G    E  +     +W   RP Y+ G  N 
Sbjct: 169 IYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNY 228

Query: 256 KDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDR 315
              EEWFF R+   RPIP+P SG+Q++ + HV+DL++   L V   ++A   IFN   ++
Sbjct: 229 NPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEK 288

Query: 316 AVTLDGMAKLCAQAAGRP-VNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKS 375
            VT DG+AK CA+A G P   IVHY+PK      KKAFPFR+ HF+A    A+ +LGWK 
Sbjct: 289 YVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKP 348

Query: 376 TTNLPEDLKERFEEYVKIGRDKKAIKFELDDKIL 399
             +L E L + +      G  +K   F  DD IL
Sbjct: 349 EFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371

[Close]

BLAST of MELO3C014337 vs. ExPASy TrEMBL
Match: A0A5D3E2H3 (Chloroplast stem-loop binding protein of 41 kDa a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00590 PE=3 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 1.8e-229
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60
           MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS
Sbjct: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60

Query: 61  SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS 120
           SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS
Sbjct: 61  SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS 120

Query: 121 SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA 180
           SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA
Sbjct: 121 SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA 180

Query: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI 240
           KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI
Sbjct: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI 240

Query: 241 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN 300
           GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN
Sbjct: 241 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN 300

Query: 301 CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL 360
           CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL
Sbjct: 301 CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL 360

Query: 361 GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA
Sbjct: 361 GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 407

[Close]

BLAST of MELO3C014337 vs. ExPASy TrEMBL
Match: A0A1S3BLW3 (chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491274 PE=3 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 1.8e-229
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60
           MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS
Sbjct: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60

Query: 61  SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS 120
           SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS
Sbjct: 61  SSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQS 120

Query: 121 SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA 180
           SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA
Sbjct: 121 SDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWA 180

Query: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI 240
           KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI
Sbjct: 181 KSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYMI 240

Query: 241 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN 300
           GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN
Sbjct: 241 GSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFN 300

Query: 301 CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL 360
           CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL
Sbjct: 301 CVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEIL 360

Query: 361 GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA
Sbjct: 361 GWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 407

[Close]

BLAST of MELO3C014337 vs. ExPASy TrEMBL
Match: A0A0A0KE82 (Epimerase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G408170 PE=3 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 1.0e-216
Identity = 390/409 (95.35%), Postives = 396/409 (96.82%), Query Frame = 0


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYS--S 60
           MAALPFSSSLFSSKPSIYFPS ISPSF   SLSPISNSSPISSSFSISHSNFLSNYS  S
Sbjct: 1   MAALPFSSSLFSSKPSIYFPSSISPSFPHPSLSPISNSSPISSSFSISHSNFLSNYSSFS 60

Query: 61  SSSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGE 120
           SSSSFRPSTV SFSVRASSS KKKVLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGE
Sbjct: 61  SSSSFRPSTVFSFSVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGE 120

Query: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVID 180
           QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKV+EGASFDVVLDNNGKDIDTVRPVID
Sbjct: 121 QSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVID 180

Query: 181 WAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQY 240
           WAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVEKY+AEVFSSWA+FRPQY
Sbjct: 181 WAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAVFRPQY 240

Query: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300
           MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI
Sbjct: 241 MIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNI 300

Query: 301 FNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360
           FNCV+ RAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE
Sbjct: 301 FNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQE 360

Query: 361 ILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           ILGW+ TTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESL VPVAA
Sbjct: 361 ILGWEGTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLNVPVAA 409

[Close]

BLAST of MELO3C014337 vs. ExPASy TrEMBL
Match: A0A6J1HIM8 (chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463943 PE=3 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 5.7e-199
Identity = 361/408 (88.48%), Postives = 381/408 (93.38%), Query Frame = 0


Query: 1   MAAL-PFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSS 60
           MAAL   SSSLF+SKPSI+ PS +SP     SLSPIS+SS ++SSF+ISHS FL   SSS
Sbjct: 1   MAALASSSSSLFTSKPSIHLPSSLSPCLLRSSLSPISSSSALTSSFAISHS-FLPFPSSS 60

Query: 61  SSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQ 120
               R S VCSFSVRASS+ KK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGE+
Sbjct: 61  ----RRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEE 120

Query: 121 SSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDW 180
           SSDKM KPPFNRFSEIVS GGKTVWGDPAE+GKV+ GASFDVVLDNNGKDID+VRPVIDW
Sbjct: 121 SSDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDW 180

Query: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYM 240
           AKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+Y+AEVFSSWA+FRPQYM
Sbjct: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYM 240

Query: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIF 300
           IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNI+HVRDLSSMLTLAVEKPDEAH+NIF
Sbjct: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNISHVRDLSSMLTLAVEKPDEAHANIF 300

Query: 301 NCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI 360
           NCV+DRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI
Sbjct: 301 NCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI 360

Query: 361 LGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           LGWKS+TNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA
Sbjct: 361 LGWKSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 403

[Close]

BLAST of MELO3C014337 vs. ExPASy TrEMBL
Match: A0A6J1HUG4 (chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466971 PE=3 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 8.2e-198
Identity = 359/408 (87.99%), Postives = 379/408 (92.89%), Query Frame = 0


Query: 1   MAAL-PFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSS 60
           MAAL   SSSLF+SKPSI+ PS +SP     S+SPIS+ S ++SSF+ISHS FL   SSS
Sbjct: 1   MAALASSSSSLFTSKPSIHLPSSLSPCLLRSSVSPISSPSALTSSFAISHS-FLPFPSSS 60

Query: 61  SSSFRPSTVCSFSVRASSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQ 120
               R S VCSFSVRASS+ KK VLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGE+
Sbjct: 61  ----RRSNVCSFSVRASSADKKNVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEE 120

Query: 121 SSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDW 180
           SSDKM KPPFNRFSEIVS GGKTVWGDPAE+GKV+ GASFDVVLDNNGKDID+VRPVIDW
Sbjct: 121 SSDKMKKPPFNRFSEIVSAGGKTVWGDPAEVGKVVAGASFDVVLDNNGKDIDSVRPVIDW 180

Query: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRPQYM 240
           AKSSGVKQFLFISSAGIYKPTDEPPHVEGD VKADAGHVGVE+Y+AEVFSSWA+FRPQYM
Sbjct: 181 AKSSGVKQFLFISSAGIYKPTDEPPHVEGDTVKADAGHVGVEQYIAEVFSSWAVFRPQYM 240

Query: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIF 300
           IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAH+NIF
Sbjct: 241 IGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHANIF 300

Query: 301 NCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEI 360
           NCV+DRAVTLDGMAKLCAQAAGRPVNIVHYDPK VGVDAKKAFPFRNMHFYAEPRAAQEI
Sbjct: 301 NCVSDRAVTLDGMAKLCAQAAGRPVNIVHYDPKPVGVDAKKAFPFRNMHFYAEPRAAQEI 360

Query: 361 LGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           LGWKS+TNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA
Sbjct: 361 LGWKSSTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 403

[Close]

BLAST of MELO3C014337 vs. TAIR 10
Match: AT3G63140.1 (chloroplast stem-loop binding protein of 41 kDa )

HSP 1 Score: 584.7 bits (1506), Expect = 5.7e-167
Identity = 309/411 (75.18%), Postives = 341/411 (82.97%), Query Frame = 0


Query: 1   MAALPFSSSLFSSKPSIYFPSPISPSFTPLSLSPISNSSPISSSFSISHSNFLSNYSSSS 60
           MAAL  SS  FSSK +    SPIS    P SL   S  S  SSSFS   S+  S+ S  +
Sbjct: 1   MAALSSSSLFFSSKTT----SPISNLLIPPSLHRFSLPSS-SSSFSSLSSSSSSSSSLLT 60

Query: 61  SSFRPSTVCS---FSVRASS-STKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTV 120
            S R S   S   F+V+ASS   KK VLIVNTNSGGHAVIGFYFAKELL +GH VTILTV
Sbjct: 61  FSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKELLSAGHAVTILTV 120

Query: 121 GEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPV 180
           G++SS+KM KPPFNRFSEIVSGGGKTVWG+PA +  V+ G +FDVVLDNNGKD+DTVRPV
Sbjct: 121 GDESSEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVLDNNGKDLDTVRPV 180

Query: 181 IDWAKSSGVKQFLFISSAGIYKPTDEPPHVEGDLVKADAGHVGVEKYMAEVFSSWAIFRP 240
           +DWAKSSGVKQFLFISSAGIYK T++PPHVEGD VKADAGHV VEKY+AE F +WA FRP
Sbjct: 181 VDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAVKADAGHVVVEKYLAETFGNWASFRP 240

Query: 241 QYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHS 300
           QYMIGSGNNKDCEEWFFDRIVRDR +PIPGSG+QLTNI+HVRDLSSMLT AV  P+ A  
Sbjct: 241 QYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASG 300

Query: 301 NIFNCVTDRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAA 360
           NIFNCV+DRAVTLDGMAKLCA AAG+ V IVHYDPKA+GVDAKKAF FRNMHFYAEPRAA
Sbjct: 301 NIFNCVSDRAVTLDGMAKLCAAAAGKTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAA 360

Query: 361 QEILGWKSTTNLPEDLKERFEEYVKIGRDKKAIKFELDDKILESLKVPVAA 408
           +++LGW+S TNLPEDLKERFEEYVKIGRDKK IKFELDDKILE+LK PVAA
Sbjct: 361 KDLLGWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKILEALKTPVAA 406

[Close]

BLAST of MELO3C014337 vs. TAIR 10
Match: AT1G09340.1 (chloroplast RNA binding )

HSP 1 Score: 199.9 bits (507), Expect = 3.9e-51
Identity = 121/334 (36.23%), Postives = 177/334 (52.99%), Query Frame = 0


Query: 76  SSSTKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEQSSDKM----NKPPFNR 135
           S+S++KK+LI+    GG   IG + ++ L+  GH+VT+ T G+    K     +   F  
Sbjct: 49  SASSEKKILIM----GGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFAD 108

Query: 136 FSEIV---SGGGKTVWGDPAEIGKVLEGASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQF 195
           FS  +    G  K    D   +   L    FDVV D NG++ + V P+++      ++Q+
Sbjct: 109 FSSKILHLKGDRK----DYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPK--LEQY 168

Query: 196 LFISSAGIYKPTDEPPHVEGDLVKADAGHVG---VEKYMAEVFSSWAIFRPQYMIGSGNN 255
           ++ SSAG+Y  +D  PH E D V   + H G    E  +     +W   RP Y+ G  N 
Sbjct: 169 IYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNY 228

Query: 256 KDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVTDR 315
              EEWFF R+   RPIP+P SG+Q++ + HV+DL++   L V   ++A   IFN   ++
Sbjct: 229 NPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAF-LNVLGNEKASREIFNISGEK 288

Query: 316 AVTLDGMAKLCAQAAGRP-VNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWKS 375
            VT DG+AK CA+A G P   IVHY+PK      KKAFPFR+ HF+A    A+ +LGWK 
Sbjct: 289 YVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKP 348

Query: 376 TTNLPEDLKERFEEYVKIGRDKKAIKFELDDKIL 399
             +L E L + +      G  +K   F  DD IL
Sbjct: 349 EFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMIL 371

The following BLAST results are available for this feature:

BLAST of MELO3C014337 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449375.1	3.7e-229	100.00	PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cuc...	[more]
XP_004140080.1	2.1e-216	95.35	chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucumis sativu...	[more]
XP_038888331.1	3.2e-204	90.42	chloroplast stem-loop binding protein of 41 kDa a, chloroplastic-like [Benincasa...	[more]
XP_022963688.1	1.2e-198	88.48	chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucurbita mosc...	[more]
XP_022967430.1	1.7e-197	87.99	chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucurbita maxi...	[more]

BLAST of MELO3C014337 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYA9	8.0e-166	75.18	Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis ...	[more]
Q9SA52	5.5e-50	36.23	Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis ...	[more]

BLAST of MELO3C014337 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E2H3	1.8e-229	100.00	Chloroplast stem-loop binding protein of 41 kDa a OS=Cucumis melo var. makuwa OX...	[more]
A0A1S3BLW3	1.8e-229	100.00	chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Cucumis melo...	[more]
A0A0A0KE82	1.0e-216	95.35	Epimerase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G408170 P...	[more]
A0A6J1HIM8	5.7e-199	88.48	chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Cucurbita mo...	[more]
A0A6J1HUG4	8.2e-198	87.99	chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Cucurbita ma...	[more]

BLAST of MELO3C014337 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63140.1	5.7e-167	75.18	chloroplast stem-loop binding protein of 41 kDa	[more]
AT1G09340.1	3.9e-51	36.23	chloroplast RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 80..381 e-value: 4.6E-32 score: 113.3
None	No IPR available	PANTHER	PTHR43725	UDP-GLUCOSE 4-EPIMERASE	coord: 61..405
None	No IPR available	PANTHER	PTHR43725:SF6	CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA A, CHLOROPLASTIC	coord: 61..405
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 91..301 e-value: 3.4E-9 score: 36.5
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 79..384

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014337.1	MELO3C014337.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity