MELO3C013909 (gene) Melon (DHL92) v4

Overview


Name	MELO3C013909
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	F-box protein
Location	chr06: 32390583 .. 32393224 (+)
RNA-Seq Expression	MELO3C013909
Synteny	MELO3C013909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCGAACATACTCCTAGCTCCCTCTGTCTCTCTCTCTCTCGTCGGACTTTTGGGAGTGTGGTCTATCTCTCTCTCTTTCTTGTTCTGATCTCCATCTAATCGGAGATTTTATTGATTCCGTCAGATTTTGAGGTGCGAAATTTTCGATCTTGTAGCATCTGTTCCCTCCACATCATCAGATTCGGAGTCAAAACCACTGTTCTTCATCTTCTCGGGCGTTTAATCATCTAGGGTTTGATCTCTCTCTCCCTCTTTGCCATTTTTGTTTCTAATTGCTAGATTCTATACGTTCTGGTTTTCCAGTTGACTGTTAACACATACCATTGTCATCGAAGAACTCAATAGTTCAAAATGCGAATGTGTGTGAAGCTGGGAAACATATGATTGTTTCTTCTGCTACTAGAAATGTGATTTTTCATTTCCTGTTTCAAATTTTATTTATTATTAATTTCAGTTTATGATGATAAGAACACAAGAGTAGTGAGAGCCTTTGTGCACACATCAGCCAGCGGAAAGTTGTGATTGTATGTGAAGAATTTTAGGGAAACCATATAAAACGTTATCACTAATAAAACTTTATCGATTTCAATAGGAGACAATTGAGATGGCTACCTAATTATCATAATAAACAACCACAGGCATGGGCGAAGGTACATGGACATTAGAAAGTAACTGAGTGAATCAAACCAACTCACTGGAGATACATGCCACTGTTCGGTACTTGGCCTCAACAAAAGTTTGTGCCACACCACACCTTAGTGGGCTATTTTGTAGATTCCCCTAAAATGACTCTAAAGCCAATAATCGAGCAATTGGTATCTGGGAAAGAACCCCAATCAGCATCTAGAGAAGCTCCAAGCTGAAAAGTAGTAGAAACTCATAACAAAATTCGTTGGCCAGGGGAACCTTTTAGTTAATGAAGTAACTGATGTACAACCGTTCAAACCTCCAGATTGAGGGTGTTTAAGAAACTGACTGAGGAGATGAACTGAATATGAAATGTTTGATTTGACTATATATTGATTGAGGGTCCTTGATAGATATTTAACTGAATAGTGTCGATCAGAATTAGCTGATTAATTACTCAATGTTTAGCTGTGTAGTTTTCAAGGATCTTACTTATGATGACATTAAAATAATTATTGCAATGTTATAATGGAAACGACTAGCATTGTTCTTGTAGCCATTCCTTAAAAATTTTCGTCATACAATGTACGCAATGAATAGCATGCAAGCCTTCCACAGAAGTATGGAGATCGTGATTTTAAAACTTTTGTGGTAGCATTCTTTTCACTGTCGAACAACATTAACCTTCTGCCGTGGCCTGTGTGTATAGTTTGATCTACTTGGATTCTCTCATATTAGCACATAGTAGCCTCTCTTTTCTGTTCTTTTTTTTTTTTTTTTTTTTTCTATTTAGCTTTTTATTATTTTTTTTAGAATGAAAGCTTGTGTTAGTTTCTCTTGAAACTTGTTCTATGCAGAATATAAATTATGCATACCACATAACTTCTAAATGTAAATAATATGATCTTTTATGTATTATGTTCTACTTTCCACCAGAATGTGCTGACTCCTACGAAAATTTCCATCACAGTTATGACTTTCTTCAATGTACTTATGTGTTGTGCTGATCAATCAATGTGGTTTATTGCTGCAGGATCAAACCTTCACGCTCTTGTTATACTTCTGTTTAGAAAATGACATGGGAAGAAGTTTTGAAGGTAATTTTTCCTTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATCGCTCGAGATGATTACTTCTGGAAATGCTTGTGTGCCAAGAAGTGGCCTTCAACTTGCAAAACGTCCCATCCTCCGACAGATACCTACTATAAACTTTATAGAAACTTTTACAAACGCCCCAATAATCGACGGCTTCTCCCTCCTCGACTTTCCTTTGATGATTTAGAGTTTTTTATCGACATTTGGAGTGAAGACAGATTAATCTTCTCAGAAGCTGTTTCAGGTCGAATCCTCCAAAATGGTATGAAGAGCCCACCACCTGGTACTAGTAACGTGCTTAGTTATCATCTCGAAGTCCCTGAGTTCAAGATGACACTTCCTGTTGAGCCAAGGTTCTCAATTCCAATATCCAATGCCGTAAGCGCATCTGTGCTTGTGGGGCGCAAGGATTCCAACAAAGTTGCAAGGATAGTGAATAAATCAGTATTTGATTATATTGATCGGACGTCGTATAGGGCATTGGCTTTTGACTACCTCGATTTTTCACCTCTCCACCCATTTGTCTCCGGAATCCGAGCATGGATCTCGTTGCTTTTCATGGACGATGGGAATGATGGTGCAATTGATGTTTTTGGAATAGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTAGACTTGCTTGATTGGAAATGAAGGTGTTGCCAACGTCAACTTTCAAAAACTTTAATTTCTGGTAAACCCATCCCTTACTTGTACATAATTTTTCATTCCATTTCATCAATAAATACAAACAAAGTTCTTTCATAGAAGAAAATCATATTTCGAAATCGATTGAAAGGAAACTTGCCTCTCTGCTACTTTTAATTAAACCTTCATCTTCTTC

mRNA sequence

AAATCGAACATACTCCTAGCTCCCTCTGTCTCTCTCTCTCTCGTCGGACTTTTGGGAGTGTGGTCTATCTCTCTCTCTTTCTTGTTCTGATCTCCATCTAATCGGAGATTTTATTGATTCCGTCAGATTTTGAGGTGCGAAATTTTCGATCTTGTAGCATCTGTTCCCTCCACATCATCAGATTCGGAGTCAAAACCACTGTTCTTCATCTTCTCGGGCGTTTAATCATCTAGGGATCAAACCTTCACGCTCTTGTTATACTTCTGTTTAGAAAATGACATGGGAAGAAGTTTTGAAGGTAATTTTTCCTTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATCGCTCGAGATGATTACTTCTGGAAATGCTTGTGTGCCAAGAAGTGGCCTTCAACTTGCAAAACGTCCCATCCTCCGACAGATACCTACTATAAACTTTATAGAAACTTTTACAAACGCCCCAATAATCGACGGCTTCTCCCTCCTCGACTTTCCTTTGATGATTTAGAGTTTTTTATCGACATTTGGAGTGAAGACAGATTAATCTTCTCAGAAGCTGTTTCAGGTCGAATCCTCCAAAATGGTATGAAGAGCCCACCACCTGGTACTAGTAACGTGCTTAGTTATCATCTCGAAGTCCCTGAGTTCAAGATGACACTTCCTGTTGAGCCAAGGTTCTCAATTCCAATATCCAATGCCGTAAGCGCATCTGTGCTTGTGGGGCGCAAGGATTCCAACAAAGTTGCAAGGATAGTGAATAAATCAGTATTTGATTATATTGATCGGACGTCGTATAGGGCATTGGCTTTTGACTACCTCGATTTTTCACCTCTCCACCCATTTGTCTCCGGAATCCGAGCATGGATCTCGTTGCTTTTCATGGACGATGGGAATGATGGTGCAATTGATGTTTTTGGAATAGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTAGACTTGCTTGATTGGAAATGAAGGTGTTGCCAACGTCAACTTTCAAAAACTTTAATTTCTGGTAAACCCATCCCTTACTTGTACATAATTTTTCATTCCATTTCATCAATAAATACAAACAAAGTTCTTTCATAGAAGAAAATCATATTTCGAAATCGATTGAAAGGAAACTTGCCTCTCTGCTACTTTTAATTAAACCTTCATCTTCTTC

Coding sequence (CDS)

ATGACATGGGAAGAAGTTTTGAAGGTAATTTTTCCTTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATCGCTCGAGATGATTACTTCTGGAAATGCTTGTGTGCCAAGAAGTGGCCTTCAACTTGCAAAACGTCCCATCCTCCGACAGATACCTACTATAAACTTTATAGAAACTTTTACAAACGCCCCAATAATCGACGGCTTCTCCCTCCTCGACTTTCCTTTGATGATTTAGAGTTTTTTATCGACATTTGGAGTGAAGACAGATTAATCTTCTCAGAAGCTGTTTCAGGTCGAATCCTCCAAAATGGTATGAAGAGCCCACCACCTGGTACTAGTAACGTGCTTAGTTATCATCTCGAAGTCCCTGAGTTCAAGATGACACTTCCTGTTGAGCCAAGGTTCTCAATTCCAATATCCAATGCCGTAAGCGCATCTGTGCTTGTGGGGCGCAAGGATTCCAACAAAGTTGCAAGGATAGTGAATAAATCAGTATTTGATTATATTGATCGGACGTCGTATAGGGCATTGGCTTTTGACTACCTCGATTTTTCACCTCTCCACCCATTTGTCTCCGGAATCCGAGCATGGATCTCGTTGCTTTTCATGGACGATGGGAATGATGGTGCAATTGATGTTTTTGGAATAGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTAGACTTGCTTGATTGGAAATGA

Protein sequence

MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDTYYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPGTSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDRTSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

Homology

[Close]

BLAST of MELO3C013909 vs. NCBI nr
Match: XP_008448789.1 (PREDICTED: F-box protein At5g39250 [Cucumis melo] >XP_008448790.1 PREDICTED: F-box protein At5g39250 [Cucumis melo] >KAA0041055.1 F-box protein [Cucumis melo var. makuwa] >TYK12065.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 522.3 bits (1344), Expect = 2.3e-144
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60
           MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT
Sbjct: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120
           YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180
           TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240
           TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]

BLAST of MELO3C013909 vs. NCBI nr
Match: XP_004147232.1 (F-box protein At5g39250 [Cucumis sativus] >KGN55831.1 hypothetical protein Csa_009987 [Cucumis sativus])

HSP 1 Score: 500.4 bits (1287), Expect = 9.2e-138
Identity = 236/249 (94.78%), Postives = 241/249 (96.79%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60
           MTWEE+LKVIFPLLEGVDLASCMAVCKQWRDIA+DDYFWKCLCAKKWPSTCKTSHPPTDT
Sbjct: 1   MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120
           YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSE VSG I QNGMK+PPP 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGGIFQNGMKNPPPS 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180
           T N+LSYHLEVPEFKMTL VEPRFSIPISN VSASVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TGNLLSYHLEVPEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240
           TSYRALAFDYLDFSP HPFVSGIRAWISLLFMDDG+DGAIDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPFHPFVSGIRAWISLLFMDDGDDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]

BLAST of MELO3C013909 vs. NCBI nr
Match: XP_038883395.1 (F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883403.1 F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883411.1 F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883415.1 F-box protein At5g39250 isoform X2 [Benincasa hispida])

HSP 1 Score: 494.6 bits (1272), Expect = 5.1e-136
Identity = 233/249 (93.57%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60
           M WEEVLKVIFPLLEGVDLASCMAVCKQWRDIA+DDYFWKCLCAK+WPSTCKT +PPTDT
Sbjct: 1   MIWEEVLKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKRWPSTCKTPNPPTDT 60

Query: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120
           YY+LYRNFYKRPNNRRLLPPRLSFD LEFFIDIWSEDRLIFSE VSG++LQNGMK+PPPG
Sbjct: 61  YYELYRNFYKRPNNRRLLPPRLSFDVLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180
           T NVLSYHLEVPEFKMTLPVEPRFSIPIS++VS SVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TINVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240
           TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]

BLAST of MELO3C013909 vs. NCBI nr
Match: XP_038883374.1 (F-box protein At5g39250 isoform X1 [Benincasa hispida] >XP_038883382.1 F-box protein At5g39250 isoform X1 [Benincasa hispida])

HSP 1 Score: 494.6 bits (1272), Expect = 5.1e-136
Identity = 233/249 (93.57%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60
           M WEEVLKVIFPLLEGVDLASCMAVCKQWRDIA+DDYFWKCLCAK+WPSTCKT +PPTDT
Sbjct: 19  MIWEEVLKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKRWPSTCKTPNPPTDT 78

Query: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120
           YY+LYRNFYKRPNNRRLLPPRLSFD LEFFIDIWSEDRLIFSE VSG++LQNGMK+PPPG
Sbjct: 79  YYELYRNFYKRPNNRRLLPPRLSFDVLEFFIDIWSEDRLIFSEVVSGQVLQNGMKNPPPG 138

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180
           T NVLSYHLEVPEFKMTLPVEPRFSIPIS++VS SVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 139 TINVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVGRKDSNKVARIVNKSVFDYIDR 198

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240
           TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDG IDVFGIVMDFCDAANTKDEVL
Sbjct: 199 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 258

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 259 WLLDLLDWK 267

[Close]

BLAST of MELO3C013909 vs. NCBI nr
Match: XP_023005069.1 (F-box protein At5g39250-like [Cucurbita maxima] >XP_023005070.1 F-box protein At5g39250-like [Cucurbita maxima] >XP_023005071.1 F-box protein At5g39250-like [Cucurbita maxima])

HSP 1 Score: 478.0 bits (1229), Expect = 4.9e-131
Identity = 224/249 (89.96%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60
           M WEE+LKVIFPLLEGVDLASCMAVCKQWRDIARDD+FWKCLCAKKWPSTCK   PPT+T
Sbjct: 1   MRWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60

Query: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120
           YYKLY+NFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSE V+G++LQ+GMK PPPG
Sbjct: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180
           TSNV++YHLE PEFKMTLPV+PRFSIPIS+ VS SVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240
           TSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGNDG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 248

[Close]

BLAST of MELO3C013909 vs. ExPASy Swiss-Prot
Match: Q9FL82 (F-box protein At5g39250 OS=Arabidopsis thaliana OX=3702 GN=At5g39250 PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 6.1e-100
Identity = 171/249 (68.67%), Postives = 206/249 (82.73%), Query Frame = 0


Query: 4   EEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDTYYK 63
           EEVLK +FPLLEG DLASCM VCKQWRDIARDD++WKC CAKKWPS CK   PPT+TYYK
Sbjct: 4   EEVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYYK 63

Query: 64  LYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPGTSN 123
           +Y+ F KR  NR L PPRLSF++LEFFIDIWSE+RL+FS  + G  L+NG+++ P G SN
Sbjct: 64  MYQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGISN 123

Query: 124 VLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDRTSY 183
           VL  HL  P++KM +P EPRF+IP++ +VS SVLV R DS+KVARI+N+SVFDYIDR+SY
Sbjct: 124 VLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSSY 183

Query: 184 RALAFDYLDFSPLHPFVSGIRAWISLLFM---DDGNDGAIDVFGIVMDFCDAANTKDEVL 243
           RALAF+YLD SP +PF+SGIRAWISLLFM   D  +DG +DVFGI +DF D A+TK+EVL
Sbjct: 184 RALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDGLLDVFGIQLDFNDVADTKEEVL 243

Query: 244 WLLDLLDWK 250
           WLLD+LDWK
Sbjct: 244 WLLDMLDWK 252

[Close]

BLAST of MELO3C013909 vs. ExPASy TrEMBL
Match: A0A1S3BL55 (F-box protein At5g39250 OS=Cucumis melo OX=3656 GN=LOC103490854 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.1e-144
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60
           MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT
Sbjct: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120
           YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180
           TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240
           TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]

BLAST of MELO3C013909 vs. ExPASy TrEMBL
Match: A0A5A7TI25 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00800 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.1e-144
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60
           MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT
Sbjct: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120
           YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180
           TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240
           TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]

BLAST of MELO3C013909 vs. ExPASy TrEMBL
Match: A0A0A0L6S1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017250 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 4.5e-138
Identity = 236/249 (94.78%), Postives = 241/249 (96.79%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60
           MTWEE+LKVIFPLLEGVDLASCMAVCKQWRDIA+DDYFWKCLCAKKWPSTCKTSHPPTDT
Sbjct: 1   MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120
           YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSE VSG I QNGMK+PPP 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGGIFQNGMKNPPPS 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180
           T N+LSYHLEVPEFKMTL VEPRFSIPISN VSASVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TGNLLSYHLEVPEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240
           TSYRALAFDYLDFSP HPFVSGIRAWISLLFMDDG+DGAIDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPFHPFVSGIRAWISLLFMDDGDDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]

BLAST of MELO3C013909 vs. ExPASy TrEMBL
Match: A0A6J1KTX3 (F-box protein At5g39250-like OS=Cucurbita maxima OX=3661 GN=LOC111498169 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.4e-131
Identity = 224/249 (89.96%), Postives = 238/249 (95.58%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60
           M WEE+LKVIFPLLEGVDLASCMAVCKQWRDIARDD+FWKCLCAKKWPSTCK   PPT+T
Sbjct: 1   MRWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60

Query: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120
           YYKLY+NFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSE V+G++LQ+GMK PPPG
Sbjct: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180
           TSNV++YHLE PEFKMTLPV+PRFSIPIS+ VS SVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240
           TSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGNDG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 248

[Close]

BLAST of MELO3C013909 vs. ExPASy TrEMBL
Match: A0A6J1H6B9 (F-box protein At5g39250 OS=Cucurbita moschata OX=3662 GN=LOC111460859 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 9.0e-131
Identity = 223/249 (89.56%), Postives = 237/249 (95.18%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60
           M WEE+LKVIFPLLEGVDLASCM VCKQWRDIARDD+FWKCLCAKKWPSTCK   PPT+T
Sbjct: 1   MRWEEILKVIFPLLEGVDLASCMLVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60

Query: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120
           YYKLY+NFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSE V+G++LQ+GMK PPPG
Sbjct: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180
           TSNV++YHLE PEFKMTLPV+PRFSIPIS+ VS SVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240
           TSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGNDG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 248

[Close]

BLAST of MELO3C013909 vs. TAIR 10
Match: AT5G39250.1 (F-box family protein )

HSP 1 Score: 365.2 bits (936), Expect = 4.3e-101
Identity = 171/249 (68.67%), Postives = 206/249 (82.73%), Query Frame = 0


Query: 4   EEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDTYYK 63
           EEVLK +FPLLEG DLASCM VCKQWRDIARDD++WKC CAKKWPS CK   PPT+TYYK
Sbjct: 4   EEVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYYK 63

Query: 64  LYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPGTSN 123
           +Y+ F KR  NR L PPRLSF++LEFFIDIWSE+RL+FS  + G  L+NG+++ P G SN
Sbjct: 64  MYQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGISN 123

Query: 124 VLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDRTSY 183
           VL  HL  P++KM +P EPRF+IP++ +VS SVLV R DS+KVARI+N+SVFDYIDR+SY
Sbjct: 124 VLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSSY 183

Query: 184 RALAFDYLDFSPLHPFVSGIRAWISLLFM---DDGNDGAIDVFGIVMDFCDAANTKDEVL 243
           RALAF+YLD SP +PF+SGIRAWISLLFM   D  +DG +DVFGI +DF D A+TK+EVL
Sbjct: 184 RALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDGLLDVFGIQLDFNDVADTKEEVL 243

Query: 244 WLLDLLDWK 250
           WLLD+LDWK
Sbjct: 244 WLLDMLDWK 252

The following BLAST results are available for this feature:

BLAST of MELO3C013909 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448789.1	2.3e-144	100.00	PREDICTED: F-box protein At5g39250 [Cucumis melo] >XP_008448790.1 PREDICTED: F-b...	[more]
XP_004147232.1	9.2e-138	94.78	F-box protein At5g39250 [Cucumis sativus] >KGN55831.1 hypothetical protein Csa_0...	[more]
XP_038883395.1	5.1e-136	93.57	F-box protein At5g39250 isoform X2 [Benincasa hispida] >XP_038883403.1 F-box pro...	[more]
XP_038883374.1	5.1e-136	93.57	F-box protein At5g39250 isoform X1 [Benincasa hispida] >XP_038883382.1 F-box pro...	[more]
XP_023005069.1	4.9e-131	89.96	F-box protein At5g39250-like [Cucurbita maxima] >XP_023005070.1 F-box protein At...	[more]

BLAST of MELO3C013909 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FL82	6.1e-100	68.67	F-box protein At5g39250 OS=Arabidopsis thaliana OX=3702 GN=At5g39250 PE=2 SV=1	[more]

BLAST of MELO3C013909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BL55	1.1e-144	100.00	F-box protein At5g39250 OS=Cucumis melo OX=3656 GN=LOC103490854 PE=4 SV=1	[more]
A0A5A7TI25	1.1e-144	100.00	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00800...	[more]
A0A0A0L6S1	4.5e-138	94.78	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G017250 PE=4 ...	[more]
A0A6J1KTX3	2.4e-131	89.96	F-box protein At5g39250-like OS=Cucurbita maxima OX=3661 GN=LOC111498169 PE=4 SV...	[more]
A0A6J1H6B9	9.0e-131	89.56	F-box protein At5g39250 OS=Cucurbita moschata OX=3662 GN=LOC111460859 PE=4 SV=1	[more]

BLAST of MELO3C013909 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39250.1	4.3e-101	68.67	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 3..73 e-value: 6.5E-11 score: 44.0
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 5..43 e-value: 3.8E-10 score: 39.5
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..42 score: 8.861604
IPR044207	F-box protein At5g39250-like	PANTHER	PTHR47722	EXPRESSED PROTEIN	coord: 1..249
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 5..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013909.1	MELO3C013909.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding