MELO3C013894 (gene) Melon (DHL92) v4

Overview


Name	MELO3C013894
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr06: 32259343 .. 32259871 (-)
RNA-Seq Expression	MELO3C013894
Synteny	MELO3C013894

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATGTTCATCAAAGTTATATAAAAGAGCTACGAGAAATGGGAAGGCCAATTCTTGTCACCCATGGTGGTGCCTTTGGAGATGTCACCTTGTTCACTTCCAGGGCTTATTTTTGCTTTCAACCATCATTCTTTCCGTCTCTCTCATTTCGATGATCATATTTGCTTGTAGCGACTCTCATAAGAAAAAGAGAAGATATGGTGGTGGCGGCGGCGGTGGAGGTTGCGGGGGCGACGGTGGTGGAGGTGGTGGAGGTTGTGGCGGTGGCGGAGGAGGTGGGGGCTGTGGCGGCGGAGGTGGAGGTGGATGTTAAAGACATACATGTTTGGTCTCCCTTATATTTGTTTCATTAGAATTCTAAAAGGATAATTTTATTCGTTATCCTAAAGTAATTACATTGTTAATCTTGTTTGCTTTAGTTTTTTACATTATGAGTTTGTTTTCTTATTGTATATTAGTTTGGTTGTGTCTCATATGTACCATATTAATTAATTATGATAATAAATAAACATTGGAACGACTTTACAGA

mRNA sequence

CAAATGTTCATCAAAGTTATATAAAAGAGCTACGAGAAATGGGAAGGCCAATTCTTGTCACCCATGGTGGTGCCTTTGGAGATGTCACCTTGTTCACTTCCAGGGCTTATTTTTGCTTTCAACCATCATTCTTTCCGTCTCTCTCATTTCGATGATCATATTTGCTTGTAGCGACTCTCATAAGAAAAAGAGAAGATATGGTGGTGGCGGCGGCGGTGGAGGTTGCGGGGGCGACGGTGGTGGAGGTGGTGGAGGTTGTGGCGGTGGCGGAGGAGGTGGGGGCTGTGGCGGCGGAGGTGGAGGTGGATGTTAAAGACATACATGTTTGGTCTCCCTTATATTTGTTTCATTAGAATTCTAAAAGGATAATTTTATTCGTTATCCTAAAGTAATTACATTGTTAATCTTGTTTGCTTTAGTTTTTTACATTATGAGTTTGTTTTCTTATTGTATATTAGTTTGGTTGTGTCTCATATGTACCATATTAATTAATTATGATAATAAATAAACATTGGAACGACTTTACAGA

Coding sequence (CDS)

AAATGTTCATCAAAGTTATATAAAAGAGCTACGAGAAATGGGAAGGCCAATTCTTGTCACCCATGGTGGTGCCTTTGGAGATGTCACCTTGTTCACTTCCAGGGCTTATTTTTGCTTTCAACCATCATTCTTTCCGTCTCTCTCATTTCGATGATCATATTTGCTTGTAGCGACTCTCATAAGAAAAAGAGAAGATATGGTGGTGGCGGCGGCGGTGGAGGTTGCGGGGGCGACGGTGGTGGAGGTGGTGGAGGTTGTGGCGGTGGCGGAGGAGGTGGGGGCTGTGGCGGCGGAGGTGGAGGTGGATGTTAA

Protein sequence

KCSSKLYKRATRNGKANSCHPWWCLWRCHLVHFQGLFLLSTIILSVSLISMIIFACSDSHKKKRRYGGGGGGGGCGGDGGGGGGGCGGGGGGGGCGGGGGGGC

Homology

[Close]

BLAST of MELO3C013894 vs. ExPASy TrEMBL
Match: A0A2N9H7L5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35740 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.8e-04
Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 35  GLFLLSTIILSVSLISMIIFACSDSHKKKRRYGGGGGGGGC-GGDGGGGGGGCGGGGGGG 94
           GL LL  II+S+S+ISM+IFAC D  KK+R  GGGGGGGGC GGDGGGGGGGC GGGGGG
Sbjct: 25  GLLLLGMIIMSLSIISMVIFACGDGSKKRR--GGGGGGGGCGGGDGGGGGGGC-GGGGGG 84

Query: 95  GCGGGGGGGC 104
           GCGGGGGGGC
Sbjct: 85  GCGGGGGGGC 91

The following BLAST results are available for this feature:

BLAST of MELO3C013894 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C013894 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C013894 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9H7L5	7.8e-04	78.57	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35740 PE=4 SV=1	[more]

BLAST of MELO3C013894 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35420	OS02G0198500 PROTEIN	coord: 33..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013894.1	MELO3C013894.1	mRNA