MELO3C013764 (gene) Melon (DHL92) v4

Overview


Name	MELO3C013764
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	cold shock domain-containing protein 3
Location	chr06: 31011912 .. 31012936 (-)
RNA-Seq Expression	MELO3C013764
Synteny	MELO3C013764

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGAGAGATTGACTGGTGTTGTTCAGTGGTTTAACGATTCAAAAGGCTTCGGCTTCATCAAGCCAGATGTAGAAGGTCCGGATCTGTTTGTTCATCAATCTTCTATTAAATCCGATGGTTACCGGAGCCTTGTTGTCGGAGATCATGTCGAGTTTCAGATCGCTCCTGGTGATGATGGAAAATCGAAAGCCATTGAGGTTGTTGCGCTTGATGGATCTTCGGGAAATCGGAGGGATAACTTTGGTGGTGGTGGTGGTGGTGGTGGTGGAAGGGGTGGCCGTGGTGGAGGTGGCGGTGGAGGTTATGGGTTTGGTGGTTGGAGAGGAGGTGATAGGCGGAATGGGAACAGTGGAGGTGGTGGGGGTGGGTGTTATCAATGTGGTGAGCAAGGGCATTTAGCTAGAGACTGTACTCGTCCTAGTAACCGCAGCGGCGGCGGCGGTGGAGGTGGTGGTGGGTGTTTTACTTGCGGTGAAGTTGGTCACTTAGCGAGGGATTGTCCACGAGGGAACAGTGGCGGAGGTGGAGGCGGAGGCAGCGGTGGTGGGGCTTGCTATAATTGTGGTGGTTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGAGCTGGAGGTGGAAGTGGTGGCGGCGGCGGCGGTGGTTGTTTTAATTGTGGGGAATATGGTCATATAGCCAGAGATTGCCAGAATGAAAGCCGTGGCAGCGGCGGTGGTGGCGGAAGATTTGGTGGCGGCGGTGGCGGTGGCTCAAACACTTGCTTCAATTGTGGGAAATCGGGGCATTTTGCTAGGGAGTGTCCTGATGCATCTTGATAAGGAGGGGGAAAGAGTAATAGTATATAATTTTTCCTTTAACCTCAATATTGTCCTTTAATTATGTTCTTCTTTTGGTGTGGATGGTGGCTATACGTAGCTTTACTTGAGAGGTTTTTATTAATTTTGATACTTTCCATGGTTGTTTAGCTCTTTAGGGGCAAATTTTTCTGGTTCACACATGATGTGGTAATTCGGTTAAATGA

mRNA sequence

ATGGCGGAAGAGAGATTGACTGGTGTTGTTCAGTGGTTTAACGATTCAAAAGGCTTCGGCTTCATCAAGCCAGATGTAGAAGGTCCGGATCTGTTTGTTCATCAATCTTCTATTAAATCCGATGGTTACCGGAGCCTTGTTGTCGGAGATCATGTCGAGTTTCAGATCGCTCCTGGTGATGATGGAAAATCGAAAGCCATTGAGGTTGTTGCGCTTGATGGATCTTCGGGAAATCGGAGGGATAACTTTGGTGGTGGTGGTGGTGGTGGTGGTGGAAGGGGTGGCCGTGGTGGAGGTGGCGGTGGAGGTTATGGGTTTGGTGGTTGGAGAGGAGGTGATAGGCGGAATGGGAACAGTGGAGGTGGTGGGGGTGGGTGTTATCAATGTGGTGAGCAAGGGCATTTAGCTAGAGACTGTACTCGTCCTAGTAACCGCAGCGGCGGCGGCGGTGGAGGTGGTGGTGGGTGTTTTACTTGCGGTGAAGTTGGTCACTTAGCGAGGGATTGTCCACGAGGGAACAGTGGCGGAGGTGGAGGCGGAGGCAGCGGTGGTGGGGCTTGCTATAATTGTGGTGGTTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGAGCTGGAGGTGGAAGTGGTGGCGGCGGCGGCGGTGGTTGTTTTAATTGTGGGGAATATGGTCATATAGCCAGAGATTGCCAGAATGAAAGCCGTGGCAGCGGCGGTGGTGGCGGAAGATTTGGTGGCGGCGGTGGCGGTGGCTCAAACACTTGCTTCAATTGTGGGAAATCGGGGCATTTTGCTAGGGAGTGTCCTGATGCATCTTGATAAGGAGGGGGAAAGAGTAATAGTATATAATTTTTCCTTTAACCTCAATATTGTCCTTTAATTATGTTCTTCTTTTGGTGTGGATGGTGGCTATACGTAGCTTTACTTGAGAGGTTTTTATTAATTTTGATACTTTCCATGGTTGTTTAGCTCTTTAGGGGCAAATTTTTCTGGTTCACACATGATGTGGTAATTCGGTTAAATGA

Coding sequence (CDS)

ATGGCGGAAGAGAGATTGACTGGTGTTGTTCAGTGGTTTAACGATTCAAAAGGCTTCGGCTTCATCAAGCCAGATGTAGAAGGTCCGGATCTGTTTGTTCATCAATCTTCTATTAAATCCGATGGTTACCGGAGCCTTGTTGTCGGAGATCATGTCGAGTTTCAGATCGCTCCTGGTGATGATGGAAAATCGAAAGCCATTGAGGTTGTTGCGCTTGATGGATCTTCGGGAAATCGGAGGGATAACTTTGGTGGTGGTGGTGGTGGTGGTGGTGGAAGGGGTGGCCGTGGTGGAGGTGGCGGTGGAGGTTATGGGTTTGGTGGTTGGAGAGGAGGTGATAGGCGGAATGGGAACAGTGGAGGTGGTGGGGGTGGGTGTTATCAATGTGGTGAGCAAGGGCATTTAGCTAGAGACTGTACTCGTCCTAGTAACCGCAGCGGCGGCGGCGGTGGAGGTGGTGGTGGGTGTTTTACTTGCGGTGAAGTTGGTCACTTAGCGAGGGATTGTCCACGAGGGAACAGTGGCGGAGGTGGAGGCGGAGGCAGCGGTGGTGGGGCTTGCTATAATTGTGGTGGTTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGAGCTGGAGGTGGAAGTGGTGGCGGCGGCGGCGGTGGTTGTTTTAATTGTGGGGAATATGGTCATATAGCCAGAGATTGCCAGAATGAAAGCCGTGGCAGCGGCGGTGGTGGCGGAAGATTTGGTGGCGGCGGTGGCGGTGGCTCAAACACTTGCTTCAATTGTGGGAAATCGGGGCATTTTGCTAGGGAGTGTCCTGATGCATCTTGA

Protein sequence

MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGGGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGGGSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGGGGRFGGGGGGGSNTCFNCGKSGHFARECPDAS

Homology

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BLAST of MELO3C013764 vs. NCBI nr
Match: XP_008448549.1 (PREDICTED: cold shock domain-containing protein 3 [Cucumis melo] >ADN33944.1 cold-shock DNA-binding family protein [Cucumis melo subsp. melo] >KAA0052958.1 cold shock domain-containing protein 3 [Cucumis melo var. makuwa] >TYK11414.1 cold shock domain-containing protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 516.2 bits (1328), Expect = 1.8e-142
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120

Query: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
           GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG
Sbjct: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180

Query: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240
           GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG
Sbjct: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240

Query: 241 GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS 273
           GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS
Sbjct: 241 GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS 272

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BLAST of MELO3C013764 vs. NCBI nr
Match: XP_004146143.1 (cold shock domain-containing protein 3 [Cucumis sativus] >KGN55657.1 hypothetical protein Csa_011109 [Cucumis sativus])

HSP 1 Score: 479.2 bits (1232), Expect = 2.4e-131
Identity = 266/277 (96.03%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNF   GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNF---GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120

Query: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNS-GGGGG 180
            GGGGCYQCGEQGHLARDCTRPSNR GGGGGGGGGCFTCGEVGHLARDCPRGNS GGGGG
Sbjct: 121 AGGGGCYQCGEQGHLARDCTRPSNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180

Query: 181 GGSGGGACYNCGGFGHLARDCNRGGAGGGS-GGGGGGGCFNCGEYGHIARDCQNESRGS- 240
           GG GGGACYNCGGFGHLARDCNRGGAGGGS GGGGGGGCFNCGEYGHIARDCQNESRGS 
Sbjct: 181 GGGGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSG 240

Query: 241 GGGGGRF--GGGGGGGSNTCFNCGKSGHFARECPDAS 273
           GGGGGRF  GGGGGGGSNTCFNCGKSGHFARECPDAS
Sbjct: 241 GGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS 273

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BLAST of MELO3C013764 vs. NCBI nr
Match: XP_038876618.1 (cold shock domain-containing protein 3 [Benincasa hispida])

HSP 1 Score: 470.3 bits (1209), Expect = 1.1e-128
Identity = 259/275 (94.18%), Postives = 259/275 (94.18%), Query Frame = 0


Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNF    GGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNF----GGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120

Query: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
            GGG CYQCGEQGHLARDCTR SNRS GGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG
Sbjct: 121 AGGGACYQCGEQGHLARDCTRASNRS-GGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180

Query: 181 GSGG-GACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGG 240
           G GG GACYNCGGFGHLARDCNRGGAGGGS  GGGGGCFNCGEYGHIARDCQNESRGSGG
Sbjct: 181 GGGGAGACYNCGGFGHLARDCNRGGAGGGS--GGGGGCFNCGEYGHIARDCQNESRGSGG 240

Query: 241 GGGRFGG---GGGGGSNTCFNCGKSGHFARECPDA 272
           GGGRFGG   GGGGG NTCFNCGKSGHFARECPDA
Sbjct: 241 GGGRFGGGGSGGGGGPNTCFNCGKSGHFARECPDA 268

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BLAST of MELO3C013764 vs. NCBI nr
Match: KAG6596667.1 (Cold shock protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 458.8 bits (1179), Expect = 3.4e-125
Identity = 249/271 (91.88%), Postives = 253/271 (93.36%), Query Frame = 0


Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA GD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIASGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNFGGG       GGRGG GGGGYGFGGWRGGDRRNG+SG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNFGGG-------GGRGGRGGGGYGFGGWRGGDRRNGSSG 120

Query: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
            GGGGCYQCGEQGHLARDC R SNR GGGGG GGGCFTCGEVGHLARDCPRGNS GGGGG
Sbjct: 121 AGGGGCYQCGEQGHLARDCARASNR-GGGGGSGGGCFTCGEVGHLARDCPRGNS-GGGGG 180

Query: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240
           G+GGG CYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGH+ARDCQNESR S GG
Sbjct: 181 GAGGGGCYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHLARDCQNESRNS-GG 240

Query: 241 GGRFGGGGGGGSNTCFNCGKSGHFARECPDA 272
           GGRFGGGGGGG+NTCFNCGKSGHFARECPDA
Sbjct: 241 GGRFGGGGGGGANTCFNCGKSGHFARECPDA 261

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BLAST of MELO3C013764 vs. NCBI nr
Match: XP_022923189.1 (cold shock domain-containing protein 3-like [Cucurbita moschata])

HSP 1 Score: 457.2 bits (1175), Expect = 9.8e-125
Identity = 251/270 (92.96%), Postives = 255/270 (94.44%), Query Frame = 0


Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNF    GGGGGRGGR GGGGGGYGFGGWRGGDRRNG+SG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNF----GGGGGRGGR-GGGGGGYGFGGWRGGDRRNGSSG 120

Query: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
            GGGGCYQCGEQGHLARDCTR SNR  GGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG
Sbjct: 121 AGGGGCYQCGEQGHLARDCTRASNR--GGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180

Query: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240
           G+GGGACYNCGGFGHLARDCNRGGAGGGS GGGGGGCFNCGEYGH+ARDCQNESRGS  G
Sbjct: 181 GAGGGACYNCGGFGHLARDCNRGGAGGGS-GGGGGGCFNCGEYGHLARDCQNESRGS--G 240

Query: 241 GGRFGGGGGGGSNTCFNCGKSGHFARECPD 271
           GGRF   GGGG+NTCFNCGKSGHFARECPD
Sbjct: 241 GGRF---GGGGANTCFNCGKSGHFARECPD 257

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BLAST of MELO3C013764 vs. ExPASy Swiss-Prot
Match: Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.5e-54
Identity = 158/296 (53.38%), Postives = 183/296 (61.82%), Query Frame = 0


Query: 5   RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
           R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+
Sbjct: 10  RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69

Query: 65  KAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGG-------GGGGGYGFGGWRGGDRRNG 124
           KAIEV A  G S N+++N   G GG     G  G       GG GG  FGG  GG RR+ 
Sbjct: 70  KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGG--GGGRRS- 129

Query: 125 NSGGGGGGCYQCGEQGHLARDCTRP-SNRSGGGGGGGGGCFTCGEVGHLARDCPRGNS-- 184
              GG G CY CG+ GH ARDC +     SGGGGGGG  C++CGEVGHLA+DC  G+   
Sbjct: 130 ---GGEGECYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGN 189

Query: 185 --GGGGGGGSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQN 244
             GGGGG GSGG  CY CGG GH ARDC +   GGG+ GGGG  C+ CG  GHIA+ C +
Sbjct: 190 RYGGGGGRGSGGDGCYMCGGVGHFARDCRQN--GGGNVGGGGSTCYTCGGVGHIAKVCTS 249

Query: 245 ESRGSGGGGGR----FGG----------------GGGGGSNTCFNCGKSGHFAREC 269
           +    GGGGGR     GG                GGGGGSN CF CGK GHFAREC
Sbjct: 250 KIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFAREC 297

[Close]

BLAST of MELO3C013764 vs. ExPASy Swiss-Prot
Match: O65639 (Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.7e-45
Identity = 147/289 (50.87%), Postives = 167/289 (57.79%), Query Frame = 0


Query: 5   RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
           R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+
Sbjct: 10  RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69

Query: 65  KAIEVVALDGSSGNRRDNFGGGGG--GGGGRG----GRGGGGGGGYGFGGWRGGDRRNGN 124
           KA+ V A  G S  + +N  G G   GGGG G    G  G      G GG  GG  R   
Sbjct: 70  KAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSR 129

Query: 125 SGGGGGGCYQCGEQGHLARDCTRPSN--RSGGGGGGGGGCFTCGEVGHLARDCPRGNSGG 184
              GG GCY CG+ GH ARDCT   N  + G   GG  GC+TCG+VGH+ARDC + + G 
Sbjct: 130 ---GGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGN 189

Query: 185 GGGGGS---GGGACYNCGGFGHLARDCNRGGAGGG--SGGGGGGGCFNCGEYGHIARDC- 244
           G   G+   G   CY CG  GH ARDC +  A G   SGGGG G C++CG  GHIARDC 
Sbjct: 190 GDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCA 249

Query: 245 --QNESRG--SGGGGGRF-------GGGGGGGSNTCFNCGKSGHFAREC 269
             +  SRG    GG G         G GGGG  N C+ CGK GHFAREC
Sbjct: 250 TKRQPSRGCYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFAREC 295

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BLAST of MELO3C013764 vs. ExPASy Swiss-Prot
Match: P27484 (Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.8e-36
Identity = 139/275 (50.55%), Postives = 156/275 (56.73%), Query Frame = 0


Query: 1   MAEE---RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIA 60
           MAEE   R  G V+WF+D KGFGFI PD  G DLFVHQS I+S+G+RSL  G+ VEF++ 
Sbjct: 1   MAEESGQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVE 60

Query: 61  PGDDGKSKAIEVVALDGSS--GNRRDNFGGGGGGGGGRGGRG-GGGGGGYGFGGWRGGDR 120
            G DG++KA++V   DG++  G R     GGGGGGGGRGG G GGG GGYG GG RGG R
Sbjct: 61  SGGDGRTKAVDVTGPDGAAVQGGR-----GGGGGGGGRGGGGYGGGSGGYG-GGGRGGSR 120

Query: 121 RNGNSGGGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNS 180
                GGG GG                      GGGGG GG                G+ 
Sbjct: 121 ---GYGGGDGGY---------------------GGGGGYGG----------------GSR 180

Query: 181 GGGGGGGSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNES 240
            GGGGGG GGG                 GG GGG G GGG GCF CGE GH ARDC    
Sbjct: 181 YGGGGGGYGGG-----------------GGYGGG-GSGGGSGCFKCGESGHFARDCSQS- 209

Query: 241 RGSGGGGGRF-GGGGGGGSNTCFNCGKSGHFAREC 269
            G GGGGGRF GGGGGGG   C+ CG+ GHFAREC
Sbjct: 241 -GGGGGGGRFGGGGGGGGGGGCYKCGEDGHFAREC 209

[Close]

BLAST of MELO3C013764 vs. ExPASy Swiss-Prot
Match: Q41188 (Cold shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=CSP2 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.8e-31
Identity = 115/235 (48.94%), Postives = 134/235 (57.02%), Query Frame = 0


Query: 4   ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
           ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ +
Sbjct: 9   ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNR 68

Query: 64  SKAIEVVALDGS--SGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGG 123
            KAI+V   DG+   GN       GGG  GGRGG GGG GGG G GG  GG       GG
Sbjct: 69  PKAIDVSGPDGAPVQGN------SGGGSSGGRGGFGGGRGGGRGSGGGYGG------GGG 128

Query: 124 GGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSG-GGGGG 183
           G GG                     GGGG GG  C+ CGE GH+ARDC  G  G GGGGG
Sbjct: 129 GYGG--------------------RGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGGG 188

Query: 184 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESR 236
           G GGG  Y  GG G+        G GG  GGGGGG C++CGE GH ARDC +  R
Sbjct: 189 GYGGGGGYGGGGGGY--------GGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203

[Close]

BLAST of MELO3C013764 vs. ExPASy Swiss-Prot
Match: Q38896 (Cold shock domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=CSP4 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.2e-30
Identity = 105/210 (50.00%), Postives = 126/210 (60.00%), Query Frame = 0


Query: 4   ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
           +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+
Sbjct: 13  DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72

Query: 64  SKAIEVVALDGS--SGNRRDNFGGGGGGGGGRGGRGGGG--GGGYGFGGWRGGDRRNGNS 123
            KAIEV   DG+   GN      GGGG  GGRGG GGGG  GGG G G + GG    G+ 
Sbjct: 73  PKAIEVSGPDGAPVQGN-----SGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYGGRGSG 132

Query: 124 GGGGGG----CYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSG 183
           G GGGG    C++CGE GH+AR+C++      GGGGGG                 R  SG
Sbjct: 133 GRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGG-----------------RYGSG 192

Query: 184 GGGGGGSGGGACYNCGGFGHLARDCNRGGA 206
           GGGGGG GG +CY+CG  GH ARDC  GGA
Sbjct: 193 GGGGGGGGGLSCYSCGESGHFARDCTSGGA 200

[Close]

BLAST of MELO3C013764 vs. ExPASy TrEMBL
Match: A0A5D3CJR2 (Cold shock domain-containing protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00680 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 8.6e-143
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120

Query: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
           GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG
Sbjct: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180

Query: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240
           GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG
Sbjct: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240

Query: 241 GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS 273
           GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS
Sbjct: 241 GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS 272

[Close]

BLAST of MELO3C013764 vs. ExPASy TrEMBL
Match: E5RDD6 (Cold-shock DNA-binding family protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 8.6e-143
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120

Query: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
           GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG
Sbjct: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180

Query: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240
           GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG
Sbjct: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240

Query: 241 GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS 273
           GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS
Sbjct: 241 GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS 272

[Close]

BLAST of MELO3C013764 vs. ExPASy TrEMBL
Match: A0A1S3BKK1 (cold shock domain-containing protein 3 OS=Cucumis melo OX=3656 GN=LOC103490693 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 8.6e-143
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120

Query: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
           GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG
Sbjct: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180

Query: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240
           GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG
Sbjct: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240

Query: 241 GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS 273
           GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS
Sbjct: 241 GGRFGGGGGGGSNTCFNCGKSGHFARECPDAS 272

[Close]

BLAST of MELO3C013764 vs. ExPASy TrEMBL
Match: A0A0A0L4X7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002765 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.2e-131
Identity = 266/277 (96.03%), Postives = 266/277 (96.03%), Query Frame = 0


Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNF   GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNF---GGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120

Query: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNS-GGGGG 180
            GGGGCYQCGEQGHLARDCTRPSNR GGGGGGGGGCFTCGEVGHLARDCPRGNS GGGGG
Sbjct: 121 AGGGGCYQCGEQGHLARDCTRPSNR-GGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180

Query: 181 GGSGGGACYNCGGFGHLARDCNRGGAGGGS-GGGGGGGCFNCGEYGHIARDCQNESRGS- 240
           GG GGGACYNCGGFGHLARDCNRGGAGGGS GGGGGGGCFNCGEYGHIARDCQNESRGS 
Sbjct: 181 GGGGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGGCFNCGEYGHIARDCQNESRGSG 240

Query: 241 GGGGGRF--GGGGGGGSNTCFNCGKSGHFARECPDAS 273
           GGGGGRF  GGGGGGGSNTCFNCGKSGHFARECPDAS
Sbjct: 241 GGGGGRFGGGGGGGGGSNTCFNCGKSGHFARECPDAS 273

[Close]

BLAST of MELO3C013764 vs. ExPASy TrEMBL
Match: A0A6J1E5N5 (cold shock domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111430958 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.7e-125
Identity = 251/270 (92.96%), Postives = 255/270 (94.44%), Query Frame = 0


Query: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60
           MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD
Sbjct: 1   MAEERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGD 60

Query: 61  DGKSKAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSG 120
           DGKSKAIEVVALDGSSGNRRDNF    GGGGGRGGR GGGGGGYGFGGWRGGDRRNG+SG
Sbjct: 61  DGKSKAIEVVALDGSSGNRRDNF----GGGGGRGGR-GGGGGGYGFGGWRGGDRRNGSSG 120

Query: 121 GGGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180
            GGGGCYQCGEQGHLARDCTR SNR  GGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG
Sbjct: 121 AGGGGCYQCGEQGHLARDCTRASNR--GGGGGGGGCFTCGEVGHLARDCPRGNSGGGGGG 180

Query: 181 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESRGSGGG 240
           G+GGGACYNCGGFGHLARDCNRGGAGGGS GGGGGGCFNCGEYGH+ARDCQNESRGS  G
Sbjct: 181 GAGGGACYNCGGFGHLARDCNRGGAGGGS-GGGGGGCFNCGEYGHLARDCQNESRGS--G 240

Query: 241 GGRFGGGGGGGSNTCFNCGKSGHFARECPD 271
           GGRF   GGGG+NTCFNCGKSGHFARECPD
Sbjct: 241 GGRF---GGGGANTCFNCGKSGHFARECPD 257

[Close]

BLAST of MELO3C013764 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 213.8 bits (543), Expect = 1.8e-55
Identity = 158/296 (53.38%), Postives = 183/296 (61.82%), Query Frame = 0


Query: 5   RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
           R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VE++IA G DGK+
Sbjct: 10  RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69

Query: 65  KAIEVVALDGSSGNRRDNFGGGGGGGGGRGGRGG-------GGGGGYGFGGWRGGDRRNG 124
           KAIEV A  G S N+++N   G GG     G  G       GG GG  FGG  GG RR+ 
Sbjct: 70  KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGG--GGGRRS- 129

Query: 125 NSGGGGGGCYQCGEQGHLARDCTRP-SNRSGGGGGGGGGCFTCGEVGHLARDCPRGNS-- 184
              GG G CY CG+ GH ARDC +     SGGGGGGG  C++CGEVGHLA+DC  G+   
Sbjct: 130 ---GGEGECYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGN 189

Query: 185 --GGGGGGGSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQN 244
             GGGGG GSGG  CY CGG GH ARDC +   GGG+ GGGG  C+ CG  GHIA+ C +
Sbjct: 190 RYGGGGGRGSGGDGCYMCGGVGHFARDCRQN--GGGNVGGGGSTCYTCGGVGHIAKVCTS 249

Query: 245 ESRGSGGGGGR----FGG----------------GGGGGSNTCFNCGKSGHFAREC 269
           +    GGGGGR     GG                GGGGGSN CF CGK GHFAREC
Sbjct: 250 KIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFAREC 297

[Close]

BLAST of MELO3C013764 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 )

HSP 1 Score: 183.0 bits (463), Expect = 3.3e-46
Identity = 147/289 (50.87%), Postives = 167/289 (57.79%), Query Frame = 0


Query: 5   RLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGKS 64
           R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VEF I  G DGK+
Sbjct: 10  RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69

Query: 65  KAIEVVALDGSSGNRRDNFGGGGG--GGGGRG----GRGGGGGGGYGFGGWRGGDRRNGN 124
           KA+ V A  G S  + +N  G G   GGGG G    G  G      G GG  GG  R   
Sbjct: 70  KAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSR 129

Query: 125 SGGGGGGCYQCGEQGHLARDCTRPSN--RSGGGGGGGGGCFTCGEVGHLARDCPRGNSGG 184
              GG GCY CG+ GH ARDCT   N  + G   GG  GC+TCG+VGH+ARDC + + G 
Sbjct: 130 ---GGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGN 189

Query: 185 GGGGGS---GGGACYNCGGFGHLARDCNRGGAGGG--SGGGGGGGCFNCGEYGHIARDC- 244
           G   G+   G   CY CG  GH ARDC +  A G   SGGGG G C++CG  GHIARDC 
Sbjct: 190 GDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCA 249

Query: 245 --QNESRG--SGGGGGRF-------GGGGGGGSNTCFNCGKSGHFAREC 269
             +  SRG    GG G         G GGGG  N C+ CGK GHFAREC
Sbjct: 250 TKRQPSRGCYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFAREC 295

[Close]

BLAST of MELO3C013764 vs. TAIR 10
Match: AT4G38680.1 (glycine rich protein 2 )

HSP 1 Score: 136.7 bits (343), Expect = 2.7e-32
Identity = 115/235 (48.94%), Postives = 134/235 (57.02%), Query Frame = 0


Query: 4   ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
           ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VEF++   ++ +
Sbjct: 9   ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNR 68

Query: 64  SKAIEVVALDGS--SGNRRDNFGGGGGGGGGRGGRGGGGGGGYGFGGWRGGDRRNGNSGG 123
            KAI+V   DG+   GN       GGG  GGRGG GGG GGG G GG  GG       GG
Sbjct: 69  PKAIDVSGPDGAPVQGN------SGGGSSGGRGGFGGGRGGGRGSGGGYGG------GGG 128

Query: 124 GGGGCYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSG-GGGGG 183
           G GG                     GGGG GG  C+ CGE GH+ARDC  G  G GGGGG
Sbjct: 129 GYGG--------------------RGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGGG 188

Query: 184 GSGGGACYNCGGFGHLARDCNRGGAGGGSGGGGGGGCFNCGEYGHIARDCQNESR 236
           G GGG  Y  GG G+        G GG  GGGGGG C++CGE GH ARDC +  R
Sbjct: 189 GYGGGGGYGGGGGGY--------GGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203

[Close]

BLAST of MELO3C013764 vs. TAIR 10
Match: AT2G21060.1 (glycine-rich protein 2B )

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-31
Identity = 105/210 (50.00%), Postives = 126/210 (60.00%), Query Frame = 0


Query: 4   ERLTGVVQWFNDSKGFGFIKPDVEGPDLFVHQSSIKSDGYRSLVVGDHVEFQIAPGDDGK 63
           +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VEF +   + G+
Sbjct: 13  DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72

Query: 64  SKAIEVVALDGS--SGNRRDNFGGGGGGGGGRGGRGGGG--GGGYGFGGWRGGDRRNGNS 123
            KAIEV   DG+   GN      GGGG  GGRGG GGGG  GGG G G + GG    G+ 
Sbjct: 73  PKAIEVSGPDGAPVQGN-----SGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYGGRGSG 132

Query: 124 GGGGGG----CYQCGEQGHLARDCTRPSNRSGGGGGGGGGCFTCGEVGHLARDCPRGNSG 183
           G GGGG    C++CGE GH+AR+C++      GGGGGG                 R  SG
Sbjct: 133 GRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGG-----------------RYGSG 192

Query: 184 GGGGGGSGGGACYNCGGFGHLARDCNRGGA 206
           GGGGGG GG +CY+CG  GH ARDC  GGA
Sbjct: 193 GGGGGGGGGLSCYSCGESGHFARDCTSGGA 200

The following BLAST results are available for this feature:

BLAST of MELO3C013764 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448549.1	1.8e-142	100.00	PREDICTED: cold shock domain-containing protein 3 [Cucumis melo] >ADN33944.1 col...	[more]
XP_004146143.1	2.4e-131	96.03	cold shock domain-containing protein 3 [Cucumis sativus] >KGN55657.1 hypothetica...	[more]
XP_038876618.1	1.1e-128	94.18	cold shock domain-containing protein 3 [Benincasa hispida]	[more]
KAG6596667.1	3.4e-125	91.88	Cold shock protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022923189.1	9.8e-125	92.96	cold shock domain-containing protein 3-like [Cucurbita moschata]	[more]

BLAST of MELO3C013764 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94C69	2.5e-54	53.38	Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 P...	[more]
O65639	4.7e-45	50.87	Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1	[more]
P27484	8.8e-36	50.55	Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1	[more]
Q41188	3.8e-31	48.94	Cold shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=CSP2 PE=1 SV=1	[more]
Q38896	3.2e-30	50.00	Cold shock domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=CSP4 P...	[more]

BLAST of MELO3C013764 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJR2	8.6e-143	100.00	Cold shock domain-containing protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
E5RDD6	8.6e-143	100.00	Cold-shock DNA-binding family protein OS=Cucumis melo subsp. melo OX=412675 PE=4...	[more]
A0A1S3BKK1	8.6e-143	100.00	cold shock domain-containing protein 3 OS=Cucumis melo OX=3656 GN=LOC103490693 P...	[more]
A0A0A0L4X7	1.2e-131	96.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002765 PE=4 SV=1	[more]
A0A6J1E5N5	4.7e-125	92.96	cold shock domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of MELO3C013764 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17870.1	1.8e-55	53.38	cold shock domain protein 3	[more]
AT4G36020.1	3.3e-46	50.87	cold shock domain protein 1	[more]
AT4G38680.1	2.7e-32	48.94	glycine rich protein 2	[more]
AT2G21060.1	2.3e-31	50.00	glycine-rich protein 2B	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 84..95 score: 44.79 coord: 146..161 score: 42.97 coord: 171..181 score: 47.73 coord: 205..223 score: 40.13
None	No IPR available	GENE3D	2.40.50.140		coord: 1..70 e-value: 4.7E-25 score: 89.3
None	No IPR available	GENE3D	4.10.60.10		coord: 152..178 e-value: 4.4E-7 score: 31.4 coord: 112..150 e-value: 4.7E-6 score: 28.1 coord: 249..272 e-value: 2.1E-8 score: 35.7 coord: 181..209 e-value: 1.7E-5 score: 26.3 coord: 213..239 e-value: 1.9E-7 score: 32.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..99
None	No IPR available	PANTHER	PTHR46565	COLD SHOCK DOMAIN PROTEIN 2	coord: 145..272 coord: 116..154 coord: 1..116
None	No IPR available	PANTHER	PTHR46565:SF12	COLD SHOCK PROTEIN 2	coord: 145..272 coord: 116..154 coord: 1..116
IPR002059	Cold-shock protein, DNA-binding	PRINTS	PR00050	COLDSHOCK	coord: 44..62 score: 40.09 coord: 8..23 score: 61.03 coord: 29..38 score: 59.44
IPR002059	Cold-shock protein, DNA-binding	PFAM	PF00313	CSD	coord: 7..70 e-value: 1.1E-22 score: 79.6
IPR002059	Cold-shock protein, DNA-binding	PROSITE	PS51857	CSD_2	coord: 5..71 score: 30.335478
IPR002059	Cold-shock protein, DNA-binding	CDD	cd04458	CSP_CDS	coord: 7..69 e-value: 3.27074E-24 score: 90.7158
IPR011129	Cold shock domain	SMART	SM00357	csp_8	coord: 7..72 e-value: 1.5E-24 score: 97.6
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 125..141 e-value: 2.9E-4 score: 30.2 coord: 186..202 e-value: 4.0E-4 score: 29.7 coord: 254..270 e-value: 5.9E-6 score: 35.8 coord: 155..171 e-value: 2.6E-5 score: 33.7 coord: 216..232 e-value: 2.5E-5 score: 33.7
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 155..170 e-value: 1.1E-7 score: 31.5 coord: 186..200 e-value: 3.5E-6 score: 26.9 coord: 125..140 e-value: 2.9E-6 score: 27.1 coord: 253..269 e-value: 5.3E-8 score: 32.6 coord: 216..231 e-value: 4.3E-7 score: 29.7
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 217..232 score: 10.938377
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 187..200 score: 10.476859
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 255..270 score: 11.432861
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 156..171 score: 11.086722
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 126..141 score: 11.004309
IPR019844	Cold-shock (CSD) domain	PROSITE	PS00352	CSD_1	coord: 19..38
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 116..173
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 236..270
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 177..233
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 4..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013764.1	MELO3C013764.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding