MELO3C013681 (gene) Melon (DHL92) v4

Overview


Name	MELO3C013681
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	RAB GTPase homolog 8A
Location	chr11: 19491532 .. 19494331 (-)
RNA-Seq Expression	MELO3C013681
Synteny	MELO3C013681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGGTTTCTTTACGGGTGATGAGCCGCTCAATTTTTTCTTCTTCTTTTTCGCTAAAATCGGTAAACTGACCCACGAATCACTGTCGATCTCTCTCAATTTTCCCACGCGCCACTTCACGCGCCTCACCGGTGACTCGTTTCCGCCTCTTCTCCCATTTTCCTGACTTGGAATCGGTACATTTCTTAGGCATTTTGGATTTTTTTGTTTTTTTTGTTTTTTTTTGTTTTTGTTCTTTCTAACTTTTGTTCGTTAATAATGGAGTTTGTTGAGTTTTTGTGTCTTTTCTTTTCTTTTCTTCATCTGGGGTTGTTTTGATAATGTTTTAGGTTATTTCTGAAGACGGTTTGTTTTGGTTTCTGATTCGATTTGATTGCAATTGTTATGGCTGCTCCACCTGCAAGAGCTCGGGCGGATTATGATTATCTCATAAAGCTTCTTTTAATCGGCGATAGCGGTGCGTAAATAGTGCCTTCTTTTCTCATTATTGTTTGTCGATTGGGAAAAACGCAAAAAATTTCGATTGGGAATGCCTGTTTCTCTGGGATCTGGGATCGCTGATGATAATGTCGATTACCCTGAAATTGATTTGGTGATTGAGGATGTTTGTTCTGATTTGATGTATTTTACATTTTTTAAATTTGAACATCTCGATTTCAAGATGTACTGCTGCTCAGTTACTGATTCGGTTCGCATTGTAATGCCACCAAATGCTAATGATGTTCTTTGGTTGCTTTCGTGTGCAGGTGTCGGTAAGAGTTGCCTTCTCTTACGTTTCTCTGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGGTGTGTATGAACTCCAGTTTTCCATATGAATGTAAATGTAAATGTCCATGTCATGTGGGATTGTGAAAATCACATGGATTTTTACGTGTTTAAAAAGCTTTTTTCTGAACTGACTGGATCAACTTTTTTCCTCCTGCAGTATTGATTTTAAAATCAGAACCATTGAGCTTGATGGAAAACGGATCAAGCTTCAAATTTGGGATACTGCTGGGCAAGAGCGCTTCCGTACAATCACCACAGGTATTCTTTGTCACCCTTCGTGATTATGGACTTGTCCATTGCTAAGAGTTGAATTCATGATAGAAAATCAACATTGTAATGCATGAAATTGATTAGTGGTTAGTCTTTACTGGATCTGTTCCTAAATTGTATATCTTTCGTGCATTCGAACTATTAATGGTGATTTTGGACAGGATAGGTTGCAGTTTCTTCTTTGTTGCATATGGAGATTGATTCTCTTTTCTTTGTTTAACAAGATGTTCCCACTATTGTTTCATGTGCTCCTTAAATTGTATCATTAGTATTAATGGTCATGCCAAATATTCCGATTAGCAGAGTTTCTTAGCTGTTTTGTTTGTTGTCTTCAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTATGATGTAACTGATGAATCATCTTTCAACAGTAAGTACCATTTGCCATTTCTTCTTGAAGATTTTTCTTTTGGTGAATTATATTTAATATTGTACATAATTTTCATTGGATCCAACATATGCTTCCATCATTCATTAATGTCTTTTCCTATGAGGTGTGGCCAAGGCTATGGAAAGGATGTTTCATAGCATCCATTTTCGTTATCATTTTTACCTACTCATTTCTTATTCTCCCCTATCCATTTTCAGATATTAGAAATTGGATTCGTAATATCGAACAACATGCTTCTGATAATGTCAACAAGATATTGGTTGGAAACAAGGCCGACATGGATGAAAGCAAAAGGGTATGCTATATTCTGCCGTAAAAGAACATAAAAGAAAGGCATAGACTCTAAATGGTTGTGCTACGTACCTCACAGCTTGTGAACAAACTGTTGTTGTCGTATGCATAGTCATTACATCAAATTCAAGAAGAAAATAATTACGGAACAGATTTTATGGCACAAAAATGTTGTTTAACACAAAATCTAGCCTCCAAGTCATAACTAAGATTACTTTATCCCTCAAGCCCTCACTATTGTCGTAACGTATCTTTTAATATCCTTCTCTTACAGGCTGTGCCTACATCCAAAGGACAGGCACTTGCCGATGAGTATGGGATCAAATTCTTTGAAACTGTGAGTTGCTTGCTCTTCTACCTGTGTAATTTTTCCACAAAAGTGTAAAGTTGGTAGGCTGAAAGATATTTCCATTGCAGAGTGCAAAGACCAATCTTAATGTGGAAGAAGTTTTCTTCTCGATAGCAAGGGATATCAAGCAACGTCTTGCTGATACTGATTCAAAAGCCGAGGTATTGTATCGTTTTTCTGCCATAATTCACCCAAACATTAAGCTACAACCTTTTATTTTCTCATTGTATCCCTATCCTATACCTATCCTATAACATCCCACAATTCATGACCAAAAAGTCGGCTTTCATTACATTTTGCAGCCTTCGACGATCAAGATCAATCAACAAGACCAGGGAGCCAATGCTGGTCAGGCTGCGCAAAAATCAGCTTGTTGTGGCTCTTAAGATGATCAAACCCTTTGAAGTAGTAATCATGTTGAAGTCATACTTCATTGATCAAGTTATTTTGTAATTCTTTTGAACTTCATTTAGTGTGTAATAGATAGATAGGCACTTTCATGTTTTAGAATTTCATTTGTGATCATGTCTATATTATAAAGATATTTATTTGTTTTCTTTTTTGGCTTTTCAGAAACGATGATGTCCCAATTATTTGTTTGCTATAAGATGGTTTGTATATAAAGCAACTATTTTTACTTTAAAAATGATAAAACTTATTTTGGTCAT

mRNA sequence

GGAGGTTTCTTTACGGGTGATGAGCCGCTCAATTTTTTCTTCTTCTTTTTCGCTAAAATCGGTAAACTGACCCACGAATCACTGTCGATCTCTCTCAATTTTCCCACGCGCCACTTCACGCGCCTCACCGGTGACTCGTTTCCGCCTCTTCTCCCATTTTCCTGACTTGGAATCGGTTATTTCTGAAGACGGTTTGTTTTGGTTTCTGATTCGATTTGATTGCAATTGTTATGGCTGCTCCACCTGCAAGAGCTCGGGCGGATTATGATTATCTCATAAAGCTTCTTTTAATCGGCGATAGCGGTGTCGGTAAGAGTTGCCTTCTCTTACGTTTCTCTGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGTATTGATTTTAAAATCAGAACCATTGAGCTTGATGGAAAACGGATCAAGCTTCAAATTTGGGATACTGCTGGGCAAGAGCGCTTCCGTACAATCACCACAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTATGATGTAACTGATGAATCATCTTTCAACAGTAAGTACCATTTGCCATTTCTTCTTGAAGATTTTTCTTTTGGTGAATTATATTTAATATTGTACATAATTTTCATTGGATCCAACATATGCTTCCATCATTCATTAATGTCTTTTCCTATGAGGTGTGGCCAAGGCTATGGAAAGGATGTTTCATAGCATCCATTTTCGTTATCATTTTTACCTACTCATTTCTTATTCTCCCCTATCCATTTTCAGATATTAGAAATTGGATTCGTAATATCGAACAACATGCTTCTGATAATGTCAACAAGATATTGGTTGGAAACAAGGCCGACATGGATGAAAGCAAAAGGGCTGTGCCTACATCCAAAGGACAGGCACTTGCCGATGAGTATGGGATCAAATTCTTTGAAACTAGTGCAAAGACCAATCTTAATGTGGAAGAAGTTTTCTTCTCGATAGCAAGGGATATCAAGCAACGTCTTGCTGATACTGATTCAAAAGCCGAGCCTTCGACGATCAAGATCAATCAACAAGACCAGGGAGCCAATGCTGGTCAGGCTGCGCAAAAATCAGCTTGTTGTGGCTCTTAAGATGATCAAACCCTTTGAAGTAGTAATCATGTTGAAGTCATACTTCATTGATCAAGTTATTTTGTAATTCTTTTGAACTTCATTTAGTGTGTAATAGATAGATAGGCACTTTCATGTTTTAGAATTTCATTTGTGATCATGTCTATATTATAAAGATATTTATTTGTTTTCTTTTTTGGCTTTTCAGAAACGATGATGTCCCAATTATTTGTTTGCTATAAGATGGTTTGTATATAAAGCAACTATTTTTACTTTAAAAATGATAAAACTTATTTTGGTCAT

Coding sequence (CDS)

ATGGCTGCTCCACCTGCAAGAGCTCGGGCGGATTATGATTATCTCATAAAGCTTCTTTTAATCGGCGATAGCGGTGTCGGTAAGAGTTGCCTTCTCTTACGTTTCTCTGATGGTTCCTTCACCACTAGTTTTATTACTACCATTGGTATTGATTTTAAAATCAGAACCATTGAGCTTGATGGAAAACGGATCAAGCTTCAAATTTGGGATACTGCTGGGCAAGAGCGCTTCCGTACAATCACCACAGCTTACTACCGTGGAGCAATGGGCATTTTGCTGGTCTATGATGTAACTGATGAATCATCTTTCAACAGTAAGTACCATTTGCCATTTCTTCTTGAAGATTTTTCTTTTGGTGAATTATATTTAATATTGTACATAATTTTCATTGGATCCAACATATGCTTCCATCATTCATTAATGTCTTTTCCTATGAGGTGTGGCCAAGGCTATGGAAAGGATGTTTCATAG

Protein sequence

MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKYHLPFLLEDFSFGELYLILYIIFIGSNICFHHSLMSFPMRCGQGYGKDVS

Homology

[Close]

BLAST of MELO3C013681 vs. ExPASy Swiss-Prot
Match: O24466 (Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-53
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 106
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNN 105

[Close]

BLAST of MELO3C013681 vs. ExPASy Swiss-Prot
Match: P28186 (Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-53
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 106
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNN 105

[Close]

BLAST of MELO3C013681 vs. ExPASy Swiss-Prot
Match: Q39433 (Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-53
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 106
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNN 105

[Close]

BLAST of MELO3C013681 vs. ExPASy Swiss-Prot
Match: Q9LZD4 (Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-50
Identity = 98/105 (93.33%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 106
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNN 105

[Close]

BLAST of MELO3C013681 vs. ExPASy Swiss-Prot
Match: Q9SF91 (Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-50
Identity = 98/105 (93.33%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MA  PARAR+DYDYLIKLLLIGDSGVGKSCLLLRFSD +FTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAVAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 106
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNN 105

[Close]

BLAST of MELO3C013681 vs. NCBI nr
Match: CAA3022586.1 (ras-related RABE1a [Olea europaea subsp. europaea])

HSP 1 Score: 214.5 bits (545), Expect = 6.3e-52
Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKYHL 110
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS Y +
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNYSM 109

[Close]

BLAST of MELO3C013681 vs. NCBI nr
Match: AQK94280.1 (Ras-related protein RABE1c [Zea mays] >AQK94283.1 Ras-related protein RABE1c [Zea mays] >AQK94284.1 Ras-related protein RABE1c [Zea mays])

HSP 1 Score: 214.2 bits (544), Expect = 8.3e-52
Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKYHL 110
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSK  L
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKLFL 109

[Close]

BLAST of MELO3C013681 vs. NCBI nr
Match: XP_013671969.1 (ras-related protein RABE1c isoform X1 [Brassica napus] >KAF3531706.1 hypothetical protein DY000_02039813 [Brassica cretica] >KAF3604179.1 hypothetical protein F2Q69_00035230 [Brassica cretica])

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-51
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSK 107
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSK
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSK 106

[Close]

BLAST of MELO3C013681 vs. NCBI nr
Match: MBA0631446.1 (hypothetical protein [Gossypium davidsonii])

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-51
Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKYHL 110
           GKR+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS + L
Sbjct: 61  GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNFQL 109

[Close]

BLAST of MELO3C013681 vs. NCBI nr
Match: MBA0635969.1 (hypothetical protein [Gossypium davidsonii])

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-51
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKYHLPF 112
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS + + F
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNFSIFF 111

[Close]

BLAST of MELO3C013681 vs. ExPASy TrEMBL
Match: A0A1D6FRS0 (Ras-related protein RABE1c OS=Zea mays OX=4577 GN=103635765 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.0e-52
Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKYHL 110
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSK  L
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKLFL 109

[Close]

BLAST of MELO3C013681 vs. ExPASy TrEMBL
Match: A0A7J8TCP9 (Uncharacterized protein (Fragment) OS=Gossypium davidsonii OX=34287 GN=Godav_024577 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.2e-52
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKYHLPF 112
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS + + F
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNFSIFF 111

[Close]

BLAST of MELO3C013681 vs. ExPASy TrEMBL
Match: A0A7J8T129 (Uncharacterized protein OS=Gossypium davidsonii OX=34287 GN=Godav_000319 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.2e-52
Identity = 105/109 (96.33%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKYHL 110
           GKR+KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS + L
Sbjct: 61  GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNFQL 109

[Close]

BLAST of MELO3C013681 vs. ExPASy TrEMBL
Match: A0A371HJD9 (Ras-related protein RABE1c OS=Mucuna pruriens OX=157652 GN=RABE1C PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 6.8e-52
Identity = 110/125 (88.00%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKYHLPFLLEDFSFGE 120
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE+SFNSK  +P       F  
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNSK--VPSCCLSLKFAN 120

Query: 121 LYLIL 126
           LY  L
Sbjct: 121 LYTTL 123

[Close]

BLAST of MELO3C013681 vs. ExPASy TrEMBL
Match: A0A0E0KKS8 (Uncharacterized protein OS=Oryza punctata OX=4537 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 8.9e-52
Identity = 105/108 (97.22%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRT+ELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSKYH 109
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS  H
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSTDH 108

[Close]

BLAST of MELO3C013681 vs. TAIR 10
Match: AT3G46060.1 (RAB GTPase homolog 8A )

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-54
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 106
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNN 105

[Close]

BLAST of MELO3C013681 vs. TAIR 10
Match: AT3G53610.1 (RAB GTPase homolog 8 )

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-54
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 106
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNN 105

[Close]

BLAST of MELO3C013681 vs. TAIR 10
Match: AT3G53610.2 (RAB GTPase homolog 8 )

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-54
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 106
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNN 105

[Close]

BLAST of MELO3C013681 vs. TAIR 10
Match: AT3G46060.2 (RAB GTPase homolog 8A )

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-54
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 106
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNN 105

[Close]

BLAST of MELO3C013681 vs. TAIR 10
Match: AT3G53610.3 (RAB GTPase homolog 8 )

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-54
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60
           MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
Sbjct: 1   MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD 60

Query: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 106
           GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN+
Sbjct: 61  GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNN 105

The following BLAST results are available for this feature:

BLAST of MELO3C013681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24466	1.6e-53	99.05	Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1	[more]
P28186	1.6e-53	99.05	Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1	[more]
Q39433	1.6e-53	99.05	Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1	[more]
Q9LZD4	1.6e-50	93.33	Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1	[more]
Q9SF91	1.6e-50	93.33	Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1	[more]

BLAST of MELO3C013681 vs. NCBI nr


Match Name	E-value	Identity	Description
CAA3022586.1	6.3e-52	97.25	ras-related RABE1a [Olea europaea subsp. europaea]	[more]
AQK94280.1	8.3e-52	98.17	Ras-related protein RABE1c [Zea mays] >AQK94283.1 Ras-related protein RABE1c [Ze...	[more]
XP_013671969.1	1.1e-51	100.00	ras-related protein RABE1c isoform X1 [Brassica napus] >KAF3531706.1 hypothetica...	[more]
MBA0631446.1	1.1e-51	96.33	hypothetical protein [Gossypium davidsonii]	[more]
MBA0635969.1	1.1e-51	95.50	hypothetical protein [Gossypium davidsonii]	[more]

BLAST of MELO3C013681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1D6FRS0	4.0e-52	98.17	Ras-related protein RABE1c OS=Zea mays OX=4577 GN=103635765 PE=4 SV=1	[more]
A0A7J8TCP9	5.2e-52	95.50	Uncharacterized protein (Fragment) OS=Gossypium davidsonii OX=34287 GN=Godav_024...	[more]
A0A7J8T129	5.2e-52	96.33	Uncharacterized protein OS=Gossypium davidsonii OX=34287 GN=Godav_000319 PE=4 SV...	[more]
A0A371HJD9	6.8e-52	88.00	Ras-related protein RABE1c OS=Mucuna pruriens OX=157652 GN=RABE1C PE=4 SV=1	[more]
A0A0E0KKS8	8.9e-52	97.22	Uncharacterized protein OS=Oryza punctata OX=4537 PE=4 SV=1	[more]

BLAST of MELO3C013681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46060.1	1.1e-54	99.05	RAB GTPase homolog 8A	[more]
AT3G53610.1	1.1e-54	99.05	RAB GTPase homolog 8	[more]
AT3G53610.2	1.1e-54	99.05	RAB GTPase homolog 8	[more]
AT3G46060.2	1.1e-54	99.05	RAB GTPase homolog 8A	[more]
AT3G53610.3	1.1e-54	99.05	RAB GTPase homolog 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 57..79 score: 57.68 coord: 39..55 score: 34.3 coord: 16..37 score: 55.38
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 17..146 e-value: 6.6E-6 score: -24.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 16..146 e-value: 6.7E-42 score: 155.2
None	No IPR available	PANTHER	PTHR47980	LD44762P	coord: 1..105
None	No IPR available	PANTHER	PTHR47980:SF5	BNAA07G37610D PROTEIN	coord: 1..105
None	No IPR available	PROSITE	PS51419	RAB	coord: 11..156 score: 24.592169
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 18..146 e-value: 4.4E-5 score: -52.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 17..105 e-value: 4.2E-38 score: 130.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..156 score: 9.184632
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..119 e-value: 4.3E-43 score: 148.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..108
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..98 e-value: 2.9E-20 score: 70.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013681.1	MELO3C013681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding