MELO3C013580 (gene) Melon (DHL92) v4

Overview


Name	MELO3C013580
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	multiprotein bridging factor 1B
Location	chr11: 17332162 .. 17333814 (+)
RNA-Seq Expression	MELO3C013580
Synteny	MELO3C013580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCTATCTAGACATTTTTATATCCTCCGATTAGAAACCCTAATTCAGATTCTCCGTATTACCCACCCTGGAACATCTTTGAAACGCGAAAAGGTGACCCGAAGAAACTTGAAATGGCTGGGATCGGACCACTTTCACAGGACTGGGAACCGGTTGTCATCAGGAAGAAGGCCCCCAACGCCGCCGCAAAGAAGGATGAGAAAGCTGTTAATGCTGCACGCCGAGCCGGGGCGGAGATTGAAACCATAAAGAAATGTGACCTCTCTAACTTTTATCAATTATCCCGTTGTTTTTCCTGTATAAGAAGCCCCAATCGCTGCTTTCTTGTTTTCGTTTTGACTTTCAACTCTATTTATTCGTAAATTGGTAACAGTTTAGCGCGGTGGTGATGACAATCGAGGGTTTTAGGTTAGAAAGATACATCCATGTTTAATATCGGGGGGCCATTTAGATTGATTTCTTTTTTCAACTGACCATCGCATTCTTTTAATGGATCGAGTGGGCAATGATCATTTGGGACTTGTTGCTGGTCTTAACTGAGTTGGGCTATGGGTACCTGTTATTTCCTTATATTCTGCGTATGTTTGTTTACAAATGGGCATGAGTCTGTTTTATCCTGTGAAATTTAGTGTTGCAATGATACTTTTTTTGGCCTTCTGCAGCTGCTGCTGGGTCAAACAAATCTGCCTCTAGCAGTACTAGTTTGAATACTAGGAAGCTTGACGAAGAGACTGAGAACCTTTCTCGTGAGTACTTCTCGATTACATTTGCATAGCATGGTTGGATAAGGTTTTTTTATCCCTTGTTTCATTCATCGGAGGATTCGTTGCTTTCATATCAGAGAAGGAGCATGGAAGCAGTCAATGACATGAAATATTTACTGTTTCAATTACTTATGGGAATTGTACTGCTTTATATTTATCTTTGGTGTTTTTTTTTCTTCATTCATTATTGTTGTCAATTGGATGTTTTATTTTGATTCTAGATGATCGTGTCCCAACTGAGCTGAAGAAAGCAATTATGCATGCTCGAACAGAGAAGAAGCTTACTCAGTCTCAACTTGCTCAAGTATGTTTCTTCTACATTCTCTGTTGGCTCGGTCTCTATTATGTGCACGTGTTAATGATGATCTGGAATTATTTTTTTTCCCCTGTAGCTTATTAATGAGAAGCCTCAAGTTATCCAGGAGTACGAATCTGGAAAAGCTATTCCGAATCAACAAATAATAACCAAACTTGAGAGAGCTCTTGGAGCAAAACTGCGTGGGAAGAAATAAAGAGATATGGAAAGTTAAGTATGAGTTCTACGTAAGCTTTTGTTTGAACCATGCTAAAAAATTCATACCCTACCGTGGTTTCAATGTGTAATTATGTTCGACCATCCTCGTATTCCTGTATAACCACTGTTGCAGTGTCTTTGGTATGTTCTTACCTGGAAATAAATAAATATTGTGTCTGTCATGTTGCGTTAGTTTCCAGATGTTTTGGCTACACTTATCACATCAGAAGTTGGCTTTATTTGAACTTAATGGCTGCAGCCATGACAATTAACAATACAGCAACTTGTATGGAGAGCGTAGGGTTGTCGTTTCATAGTTGTTTCTGAACATTATTTATATTATCGATGCCCATGATGCAATTTGAGTTCTTTGCT

mRNA sequence

AAGCTATCTAGACATTTTTATATCCTCCGATTAGAAACCCTAATTCAGATTCTCCGTATTACCCACCCTGGAACATCTTTGAAACGCGAAAAGGTGACCCGAAGAAACTTGAAATGGCTGGGATCGGACCACTTTCACAGGACTGGGAACCGGTTGTCATCAGGAAGAAGGCCCCCAACGCCGCCGCAAAGAAGGATGAGAAAGCTGTTAATGCTGCACGCCGAGCCGGGGCGGAGATTGAAACCATAAAGAAATTTTAGCGCGGTGGTGATGACAATCGAGGGTTTTAGGTTAGAAAGATACATCCATGTTTAATATCGGGGGGCCATTTAGATTGATTTCTTTTTTCAACTGACCATCGCATTCTTTTAATGGATCGAGTGGGCAATGATCATTTGGGACTTGTTGCTGGTCTTAACTGAGTTGGGCTATGGGTACCTGTTATTTCCTTATATTCTGCCTGCTGCTGGGTCAAACAAATCTGCCTCTAGCAGTACTAGTTTGAATACTAGGAAGCTTGACGAAGAGACTGAGAACCTTTCTCATGATCGTGTCCCAACTGAGCTGAAGAAAGCAATTATGCATGCTCGAACAGAGAAGAAGCTTACTCAGTCTCAACTTGCTCAACTTATTAATGAGAAGCCTCAAGTTATCCAGGAGTACGAATCTGGAAAAGCTATTCCGAATCAACAAATAATAACCAAACTTGAGAGAGCTCTTGGAGCAAAACTGCGTGGGAAGAAATAAAGAGATATGGAAAGTTAAGTATGAGTTCTACGTAAGCTTTTGTTTGAACCATGCTAAAAAATTCATACCCTACCGTGGTTTCAATGTGTAATTATGTTCGACCATCCTCGTATTCCTGTATAACCACTGTTGCAGTGTCTTTGGTATGTTCTTACCTGGAAATAAATAAATATTGTGTCTGTCATGTTGCGTTAGTTTCCAGATGTTTTGGCTACACTTATCACATCAGAAGTTGGCTTTATTTGAACTTAATGGCTGCAGCCATGACAATTAACAATACAGCAACTTGTATGGAGAGCGTAGGGTTGTCGTTTCATAGTTGTTTCTGAACATTATTTATATTATCGATGCCCATGATGCAATTTGAGTTCTTTGCT

Coding sequence (CDS)

ATGATCATTTGGGACTTGTTGCTGGTCTTAACTGAGTTGGGCTATGGGTACCTGTTATTTCCTTATATTCTGCCTGCTGCTGGGTCAAACAAATCTGCCTCTAGCAGTACTAGTTTGAATACTAGGAAGCTTGACGAAGAGACTGAGAACCTTTCTCATGATCGTGTCCCAACTGAGCTGAAGAAAGCAATTATGCATGCTCGAACAGAGAAGAAGCTTACTCAGTCTCAACTTGCTCAACTTATTAATGAGAAGCCTCAAGTTATCCAGGAGTACGAATCTGGAAAAGCTATTCCGAATCAACAAATAATAACCAAACTTGAGAGAGCTCTTGGAGCAAAACTGCGTGGGAAGAAATAA

Protein sequence

MIIWDLLLVLTELGYGYLLFPYILPAAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKPQVIQEYESGKAIPNQQIITKLERALGAKLRGKK

Homology

[Close]

BLAST of MELO3C013580 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-37
Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 27  AGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKP 86
           AGSNK+ASS TSLNT+KLD++TENLSHDRVPTELKKAIM AR EKKLTQSQLA LINEKP
Sbjct: 50  AGSNKAASSGTSLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKP 109

Query: 87  QVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           QVIQEYESGKAIPNQQI++KLERALGAKLRGKK
Sbjct: 110 QVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-36
Identity = 79/93 (84.95%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 27  AGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKP 86
           AG+NK+ASS TSLNT+ LD++TENL+H+RVPTELKKAIM ART+KKLTQSQLAQ+INEKP
Sbjct: 50  AGTNKAASSGTSLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKP 109

Query: 87  QVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           QVIQEYESGKAIPNQQI++KLERALGAKLRGKK
Sbjct: 110 QVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. ExPASy Swiss-Prot
Match: Q6PBY3 (Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=edf1 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-20
Identity = 56/93 (60.22%), Postives = 63/93 (67.74%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAG NK      + NT KLD ETE LSH RVP E+ K I   R  K LTQ  LA  INEK
Sbjct: 44  AAGQNK--QHVVTKNTAKLDRETEELSHQRVPLEVGKVIQQGRQNKGLTQKDLATKINEK 103

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGK 119
           PQ+I EYE GKAIPN Q++ K+ERA+G KLRGK
Sbjct: 104 PQIIAEYECGKAIPNNQVMGKIERAIGLKLRGK 134

[Close]

BLAST of MELO3C013580 vs. ExPASy Swiss-Prot
Match: Q3T0V7 (Endothelial differentiation-related factor 1 OS=Bos taurus OX=9913 GN=EDF1 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.3e-20
Identity = 56/93 (60.22%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAG NK    S + NT KLD ETE L HDRV  E+ K I   R  K LTQ  LA  INEK
Sbjct: 45  AAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEK 104

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGK 119
           PQVI +YESG+AIPN Q++ K+ERA+G KLRGK
Sbjct: 105 PQVIADYESGRAIPNNQVLGKIERAIGLKLRGK 135

[Close]

BLAST of MELO3C013580 vs. ExPASy Swiss-Prot
Match: O60869 (Endothelial differentiation-related factor 1 OS=Homo sapiens OX=9606 GN=EDF1 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.3e-20
Identity = 56/93 (60.22%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAG NK    S + NT KLD ETE L HDRV  E+ K I   R  K LTQ  LA  INEK
Sbjct: 45  AAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEK 104

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGK 119
           PQVI +YESG+AIPN Q++ K+ERA+G KLRGK
Sbjct: 105 PQVIADYESGRAIPNNQVLGKIERAIGLKLRGK 135

[Close]

BLAST of MELO3C013580 vs. NCBI nr
Match: XP_008448251.1 (PREDICTED: multiprotein-bridging factor 1b [Cucumis melo] >KAA0062161.1 multiprotein-bridging factor 1b [Cucumis melo var. makuwa] >TYK04879.1 multiprotein-bridging factor 1b [Cucumis melo var. makuwa])

HSP 1 Score: 174.9 bits (442), Expect = 4.2e-40
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK
Sbjct: 49  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 108

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK
Sbjct: 109 PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. NCBI nr
Match: XP_004149278.1 (multiprotein-bridging factor 1b [Cucumis sativus] >KGN46986.1 hypothetical protein Csa_020917 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 9.4e-40
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAGSNKSASSST+LNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK
Sbjct: 49  AAGSNKSASSSTTLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 108

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK
Sbjct: 109 PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. NCBI nr
Match: XP_038902723.1 (multiprotein-bridging factor 1b-like [Benincasa hispida])

HSP 1 Score: 172.6 bits (436), Expect = 2.1e-39
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHAR EKKLTQSQLAQLINEK
Sbjct: 49  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARMEKKLTQSQLAQLINEK 108

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK
Sbjct: 109 PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. NCBI nr
Match: XP_023533868.1 (multiprotein-bridging factor 1b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170.6 bits (431), Expect = 8.0e-39
Identity = 92/94 (97.87%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAGSNKSASSSTSLNTRKLDEETENL+HDRVPTELKKAIM ARTEKKLTQSQLAQLINEK
Sbjct: 49  AAGSNKSASSSTSLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEK 108

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK
Sbjct: 109 PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. NCBI nr
Match: XP_022149711.1 (multiprotein-bridging factor 1b-like [Momordica charantia])

HSP 1 Score: 169.5 bits (428), Expect = 1.8e-38
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIM ARTEKKLTQSQLAQLINEK
Sbjct: 49  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMQARTEKKLTQSQLAQLINEK 108

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           PQVIQ+YE+GKAIPNQQIITKLERALGAKLRGKK
Sbjct: 109 PQVIQDYEAGKAIPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. ExPASy TrEMBL
Match: A0A5A7V8Z5 (Multiprotein-bridging factor 1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G00720 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK
Sbjct: 49  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 108

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK
Sbjct: 109 PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. ExPASy TrEMBL
Match: A0A1S3BIN6 (multiprotein-bridging factor 1b OS=Cucumis melo OX=3656 GN=LOC103490498 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK
Sbjct: 49  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 108

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK
Sbjct: 109 PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. ExPASy TrEMBL
Match: A0A0A0KGV6 (HTH cro/C1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G157120 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.6e-40
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAGSNKSASSST+LNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK
Sbjct: 49  AAGSNKSASSSTTLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 108

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK
Sbjct: 109 PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. ExPASy TrEMBL
Match: A0A6J1D976 (multiprotein-bridging factor 1b-like OS=Momordica charantia OX=3673 GN=LOC111018072 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 8.6e-39
Identity = 91/94 (96.81%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 26  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEK 85
           AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIM ARTEKKLTQSQLAQLINEK
Sbjct: 49  AAGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMQARTEKKLTQSQLAQLINEK 108

Query: 86  PQVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           PQVIQ+YE+GKAIPNQQIITKLERALGAKLRGKK
Sbjct: 109 PQVIQDYEAGKAIPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. ExPASy TrEMBL
Match: A0A6J1JEZ7 (multiprotein-bridging factor 1b OS=Cucurbita maxima OX=3661 GN=LOC111483898 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.1e-38
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 27  AGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKP 86
           AGSNKSASSSTSLNTRKLDEETENL+HDRVPTELKKAIM ARTEKKLTQSQLAQLINEKP
Sbjct: 50  AGSNKSASSSTSLNTRKLDEETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKP 109

Query: 87  QVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           QVIQEYESGKAIPNQQIITKLERALGAKLRGKK
Sbjct: 110 QVIQEYESGKAIPNQQIITKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 157.1 bits (396), Expect = 8.5e-39
Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 27  AGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKP 86
           AGSNK+ASS TSLNT+KLD++TENLSHDRVPTELKKAIM AR EKKLTQSQLA LINEKP
Sbjct: 50  AGSNKAASSGTSLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKP 109

Query: 87  QVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           QVIQEYESGKAIPNQQI++KLERALGAKLRGKK
Sbjct: 110 QVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 153.7 bits (387), Expect = 9.4e-38
Identity = 79/93 (84.95%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 27  AGSNKSASSSTSLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINEKP 86
           AG+NK+ASS TSLNT+ LD++TENL+H+RVPTELKKAIM ART+KKLTQSQLAQ+INEKP
Sbjct: 50  AGTNKAASSGTSLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKP 109

Query: 87  QVIQEYESGKAIPNQQIITKLERALGAKLRGKK 120
           QVIQEYESGKAIPNQQI++KLERALGAKLRGKK
Sbjct: 110 QVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of MELO3C013580 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 97.8 bits (242), Expect = 6.1e-21
Identity = 51/94 (54.26%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 27  AGSNKSASSST--SLNTRKLDEETENLSHDRVPTELKKAIMHARTEKKLTQSQLAQLINE 86
           AGSNK   S+    +NT+KL+EETE  + DRV  E++  I  AR EKK++Q+ LA+ INE
Sbjct: 52  AGSNKKGKSTAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINE 111

Query: 87  KPQVIQEYESGKAIPNQQIITKLERALGAKLRGK 119
           + QV+QEYE+GKA+PNQ ++ K+E+ LG KLRGK
Sbjct: 112 RTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGK 145

The following BLAST results are available for this feature:

BLAST of MELO3C013580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXT3	1.2e-37	89.25	Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV...	[more]
Q9SJI8	1.3e-36	84.95	Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV...	[more]
Q6PBY3	1.7e-20	60.22	Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=e...	[more]
Q3T0V7	2.3e-20	60.22	Endothelial differentiation-related factor 1 OS=Bos taurus OX=9913 GN=EDF1 PE=2 ...	[more]
O60869	2.3e-20	60.22	Endothelial differentiation-related factor 1 OS=Homo sapiens OX=9606 GN=EDF1 PE=...	[more]

BLAST of MELO3C013580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448251.1	4.2e-40	100.00	PREDICTED: multiprotein-bridging factor 1b [Cucumis melo] >KAA0062161.1 multipro...	[more]
XP_004149278.1	9.4e-40	98.94	multiprotein-bridging factor 1b [Cucumis sativus] >KGN46986.1 hypothetical prote...	[more]
XP_038902723.1	2.1e-39	98.94	multiprotein-bridging factor 1b-like [Benincasa hispida]	[more]
XP_023533868.1	8.0e-39	97.87	multiprotein-bridging factor 1b-like [Cucurbita pepo subsp. pepo]	[more]
XP_022149711.1	1.8e-38	96.81	multiprotein-bridging factor 1b-like [Momordica charantia]	[more]

BLAST of MELO3C013580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V8Z5	2.1e-40	100.00	Multiprotein-bridging factor 1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BIN6	2.1e-40	100.00	multiprotein-bridging factor 1b OS=Cucumis melo OX=3656 GN=LOC103490498 PE=4 SV=...	[more]
A0A0A0KGV6	4.6e-40	98.94	HTH cro/C1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G15...	[more]
A0A6J1D976	8.6e-39	96.81	multiprotein-bridging factor 1b-like OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1JEZ7	1.1e-38	97.85	multiprotein-bridging factor 1b OS=Cucurbita maxima OX=3661 GN=LOC111483898 PE=4...	[more]

BLAST of MELO3C013580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58680.1	8.5e-39	89.25	multiprotein bridging factor 1B	[more]
AT2G42680.1	9.4e-38	84.95	multiprotein bridging factor 1A	[more]
AT3G24500.1	6.1e-21	54.26	multiprotein bridging factor 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 64..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..55
None	No IPR available	PANTHER	PTHR10245	ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1	coord: 26..119
None	No IPR available	PANTHER	PTHR10245:SF120	MULTIPROTEIN-BRIDGING FACTOR 1B-LIKE	coord: 26..119
IPR001387	Cro/C1-type helix-turn-helix domain	SMART	SM00530	mbf_short4	coord: 63..118 e-value: 7.9E-11 score: 52.0
IPR001387	Cro/C1-type helix-turn-helix domain	PFAM	PF01381	HTH_3	coord: 64..114 e-value: 1.4E-12 score: 47.4
IPR001387	Cro/C1-type helix-turn-helix domain	PROSITE	PS50943	HTH_CROC1	coord: 64..118 score: 12.357924
IPR001387	Cro/C1-type helix-turn-helix domain	CDD	cd00093	HTH_XRE	coord: 62..112 e-value: 6.674E-10 score: 49.0886
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	1.10.260.40		coord: 48..119 e-value: 1.6E-29 score: 103.2
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	47413	lambda repressor-like DNA-binding domains	coord: 57..115
IPR013729	Multiprotein bridging factor 1, N-terminal	PFAM	PF08523	MBF1	coord: 26..56 e-value: 1.1E-5 score: 25.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C013580.1	MELO3C013580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding