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MELO3C013179 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTCACATCTAAACCAAACCGTATAAGCCTTCTTCGTTGCCCTAATTGAAGTTCCATTCCCGTAGCTGGCGACTGTGAGGGCGTGAGCTGCTGCGACTTCCGAGTGAACTCAGACAGAGTTAGGTCTTCCAATTTCCTTTCTTGAGATATCTATTTGCTTGAATCGCCATGGCGAGCACCAAAGTTCAGAGGATTATGACCCAACCTATAGTACTTTCTCATCTCAACTTATTTTGCTTCATTTCATCCTTCCTTTCCCCTTTTCTCTTACGTGTTTCACTTATGCATTTTTCTCTCTCTCTCTCCTCTCTCTCTCTTTTATTGGATGTTGGTGCACCTTCAGAACTTGATTTTCAGGTTTCTTCAAAGTGTAAGTTCCTTTTCATGATCATTTACTTTATTTTCCATTTTGGGTATCGACGATTTGTTGTTGTTGTTGTTGTTTTTTTTTTCTTAAATAGTGAAATTGGTGTGTTCTTCCTCTGATGTTACTTACTTTTGTCTTCACGTTGGAAATTTGTGCAGAAAGCTCGAATTCAAATATGGCTTTTTGAGCAAAAAGACCTGAGGATTGAAGGCCGAATTATTGTAAGTTCTTTAGACTTGTGGGCTTTTTCTTCGAGAAAATCATCGTGCAAATATCTAGTTTATCTATTCTTAATGTACATTTGAATGTTAAAAAAGCTTACTAGGATTTTAAGTTTCCAAATATTGATTGTACGTCTGGGGTTTTAAGTTATTTTTTTCGAACTGAGGTGCATAGTTATGCTTTTACTGTTTTCCCACTCAAAAGAGATCATTCCAACATGGATGCAAAAGGAAGATAGTTTAATCCTGTTTGGTAATCATTTGATTTTTTGTTTTTTGGTTTTTGAAAATTAAACTTATAAACCCTACTTTGGTCGTTGGAAATTCTGGGGCATTCTCTGCTCATTTGACCTTCCATAAACTTACCAGTTACCTGAACTAGTCATAAGCTTAAAACCCTGCAGATGAAGTTGATATGATTATATGAAAGTTTTATATTCCAAAGAAGATAAAAGTCTTCCTCTGGAGTCTCACGCATAATAATCTAAATGCTTACAGAATCTTAGAAAGCATTGCTTGTCTCCATCGGTGTGCTTGCTCTGCCTCAAAGGATAGGAATCCAGTAACCACTTATTCCTATTTTTAGCTTCGCTAGAAGGGGTTGGTAGCAACTTTTTAAACTTTTGGTCTAAAACTTTGTATTCTTGAGGAGTAAGTAGTTGGTTTTTAGATGCTCTTTAAGGGTGGCCCTTTGAATGTAAAGCTGAAATCCTATGGGGTTGTACAACTCAAGTTCTTTTATGAGAGCTGTGGAAAGAATTATTTGAACAACGTGTGAAGATAAGTCCTGCTCCTTTGTTGATTTTTGTAACCTTGTACAACTTAATTTTTCTTTGTGGACTCATATGTGGATCCTCGAAGATGTGACTTTATTGTTATTCTTTTTTTTTTTTTTTTGTGATTAATACCTAGTTCTGTATCTTATAGAAAAAGCCAAGATATGAGAGCACATAAATATCTTCTTCCCTTAGTTGATTTGTTTTGGTTACACAGCCCAGATCAACTTGCATTGCAGAAAAAGAGAATCAATTTGTTTGTTTCCTTAATATAGTTGTCCAACATCTAGGTTGGTGGCTATCATTTTTGAAGCCATGGATGCTCAAGCTATTTTTGGAGAAATATTTGGTTCATGAAGGTTAGTAGTAGTTGTACTGCAAGGGATAAAGGATTTGTGTGTCTAGGATCCTGACCTTCTGGACGGCGTCTCCTATAGCTCATTTTTCCATTTGTTGCATCCCCCGCCGTTCAGTGAGTTTATGTTCTTTAACATCTGAAAATTTAAGATTCCTAAGAAAGTAAGGTTCTTTATTTGGCAAGTTGTATATGAATGTGTGAACACATTGGACCGACGCTTGAGCGCGATTCCTTTGCTAGTGGGCCATTTTGCTATATTCTTTGTTGGAAGGCAGAGGAAGATTTGAATCTCATTCTTTGGAGGTGTGAGTTTGTGTTTGCAGTTTGGGACTTGTTTTTCTAGACTTCTGTCTTGATGCTTGCCTGTCCTAGGGGCACTAGAGATATGTTCAGGAAGTTCTTCCACTAATTTAATGCCTCAAGATCTCTTCCATTATTCCACGCCTTTTTGGTGTTCCTTTCCAGGAATGAAATACCATAATCTTTGGTAAAATCTCTTCTAATATTGACATCATCTACAGTACCAAAACATTATTATTGCTGTTATTATTTTGGTAAGAGATTGTGCTTTCATGGAGAGAAATGAAAGAATATACGAGGACACACATAAAAAAAAACCCTAACAAAAAAGGGACTCTAATTGAAAAGAACAAGATTAAACTCATAATTATGAAAATGACTTACGACTTGGTCGTTCTGATGCCCATGGGCTATAATTGTTAGTTGAGGCACCAATTGGAAGTTGGTGTAGTGGATTATTGTAGACCACTCCATGTTTGGTGCACCAACTATAATAATGGTGTGGACAACTATATGCAACCTGTAATTAACTACAGTAAATACTATTTTAAAACCCTTTTCGCTACTATATTTTACTATTTTGTTACATTATTTGATATTTTTCACTCATATGCTCTTTTCTTCTTTGGTACAGTGTTTACTATTTCCTACCTGAACAAAAATATTCTACACCCCAAACAAACTACTATAACTCAAAGTAGTCAGAACCCCAAACGCCAACTATTATAACTCCCTAACTATTGATAACCACCAACTATAATGACCAACTTAGGACTCTAAATGCTCCCCAAGTTTTTTTAATTTGAGGGTTTCTATAAGTTTGTGATGTGTCTTCTGAACATTATTAATTTTCTGGTGACGACTTCTGAGTTTTACTTCCCAGGGATTTGACGAATATATGAATTTGGTTTTGGATGATGCTGAGGAAGTCAATGTAAAGAAGAAGAGCAGGAAAACTTTGGGTTTGTCTCTTCATCATTTCCTCTCGAAGTCAACACTTAAAATAGTTTAAGGGCAGATTAAAAACTCGTCTTATCTTTAACTTTTTCAGGGAGGATATTGCTTAAAGGGGATAACATAACTCTGATGATGAACTCGTAAGTCCTTTGGAAGCTCTCTCTTTCAAAATTCATCAATACTGATGCATAATTGCTCTTTCTAAAAAAATTCATGAATTGTAAACGAATGCAAAATTGCAGGGGCAAGTGATGACCATTTTTGAACCAATACAAGAGATAGTGAAGTGTAGCCCTTTTCAGTGGTGGAACTTGGAAGTCTTGTGTTGATCATAACATAGATTGTTATTTTTACTGTCAATTGGTTGACTGTTTTTGTACTTGCCTTAAAAAGAAATTAGAATGTCAGCTTATATGAGAGATAGTCATGGCACTCAACTCATCCAGCACTAATGTTGCTTAGATCATTGTATTTATTTTGCATATATCCTCAACCTTATGATACATGCTAGATATTTGCTGAGCTATGGTGGATTAATTGGACAACAAGAAGAAATTGGCTATTTTTATTTTATTTTATTTTAATTTTTAATTTTAAATCTTTATAAGCATTTTTCACTATTG AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAATTCACATCTAAACCAAACCGTATAAGCCTTCTTCGTTGCCCTAATTGAAGTTCCATTCCCGTAGCTGGCGACTGTGAGGGCGTGAGCTGCTGCGACTTCCGAGTGAACTCAGACAGAGTTAGGTCTTCCAATTTCCTTTCTTGAGATATCTATTTGCTTGAATCGCCATGGCGAGCACCAAAGTTCAGAGGATTATGACCCAACCTATAAAAGCTCGAATTCAAATATGGCTTTTTGAGCAAAAAGACCTGAGGATTGAAGGCCGAATTATTGGATTTGACGAATATATGAATTTGGTTTTGGATGATGCTGAGGAAGTCAATGTAAAGAAGAAGAGCAGGAAAACTTTGGGGAGGATATTGCTTAAAGGGGATAACATAACTCTGATGATGAACTCGGGCAAGTGATGACCATTTTTGAACCAATACAAGAGATAGTGAAGTGTAGCCCTTTTCAGTGGTGGAACTTGGAAGTCTTGTGTTGATCATAACATAGATTGTTATTTTTACTGTCAATTGGTTGACTGTTTTTGTACTTGCCTTAAAAAGAAATTAGAATGTCAGCTTATATGAGAGATAGTCATGGCACTCAACTCATCCAGCACTAATGTTGCTTAGATCATTGTATTTATTTTGCATATATCCTCAACCTTATGATACATGCTAGATATTTGCTGAGCTATGGTGGATTAATTGGACAACAAGAAGAAATTGGCTATTTTTATTTTATTTTATTTTAATTTTTAATTTTAAATCTTTATAAGCATTTTTCACTATTG ATGGCGAGCACCAAAGTTCAGAGGATTATGACCCAACCTATAAAAGCTCGAATTCAAATATGGCTTTTTGAGCAAAAAGACCTGAGGATTGAAGGCCGAATTATTGGATTTGACGAATATATGAATTTGGTTTTGGATGATGCTGAGGAAGTCAATGTAAAGAAGAAGAGCAGGAAAACTTTGGGGAGGATATTGCTTAAAGGGGATAACATAACTCTGATGATGAACTCGGGCAAGTGA MASTKVQRIMTQPIKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVNVKKKSRKTLGRILLKGDNITLMMNSGK Homology
BLAST of MELO3C013179 vs. NCBI nr
Match: XP_042990589.1 (small nuclear ribonucleoprotein E-like isoform X3 [Carya illinoinensis]) HSP 1 Score: 151.4 bits (381), Expect = 3.3e-33 Identity = 76/79 (96.20%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of MELO3C013179 vs. NCBI nr
Match: TXG49478.1 (hypothetical protein EZV62_025353 [Acer yangbiense]) HSP 1 Score: 151.0 bits (380), Expect = 4.4e-33 Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of MELO3C013179 vs. NCBI nr
Match: KAF9680590.1 (hypothetical protein SADUNF_Sadunf06G0137600 [Salix dunnii]) HSP 1 Score: 150.6 bits (379), Expect = 5.7e-33 Identity = 75/79 (94.94%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of MELO3C013179 vs. NCBI nr
Match: ONM28487.1 (Small nuclear ribonucleoprotein family protein [Zea mays] >PWZ31512.1 Small nuclear ribonucleoprotein E [Zea mays]) HSP 1 Score: 150.2 bits (378), Expect = 7.4e-33 Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of MELO3C013179 vs. NCBI nr
Match: KNA10835.1 (hypothetical protein SOVF_140750 isoform B [Spinacia oleracea]) HSP 1 Score: 149.4 bits (376), Expect = 1.3e-32 Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of MELO3C013179 vs. ExPASy Swiss-Prot
Match: A4FUI2 (Small nuclear ribonucleoprotein E OS=Bos taurus OX=9913 GN=SNRPE PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.0e-22 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of MELO3C013179 vs. ExPASy Swiss-Prot
Match: P62303 (Small nuclear ribonucleoprotein E OS=Gallus gallus OX=9031 GN=SNRPE PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.0e-22 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of MELO3C013179 vs. ExPASy Swiss-Prot
Match: P62304 (Small nuclear ribonucleoprotein E OS=Homo sapiens OX=9606 GN=SNRPE PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.0e-22 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of MELO3C013179 vs. ExPASy Swiss-Prot
Match: P62305 (Small nuclear ribonucleoprotein E OS=Mus musculus OX=10090 GN=Snrpe PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.0e-22 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of MELO3C013179 vs. ExPASy Swiss-Prot
Match: A1XQR9 (Small nuclear ribonucleoprotein E OS=Sus scrofa OX=9823 GN=SNRPE PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.0e-22 Identity = 52/81 (64.20%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of MELO3C013179 vs. ExPASy TrEMBL
Match: A0A5C7GXL1 (Small nuclear ribonucleoprotein E OS=Acer yangbiense OX=1000413 GN=EZV62_025353 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.1e-33 Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of MELO3C013179 vs. ExPASy TrEMBL
Match: A0A1D6MFZ5 (Small nuclear ribonucleoprotein E OS=Zea mays OX=4577 GN=103649582 PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.6e-33 Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of MELO3C013179 vs. ExPASy TrEMBL
Match: A0A3L6FEA0 (Small nuclear ribonucleoprotein E OS=Zea mays OX=4577 GN=SNRPE PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.6e-33 Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of MELO3C013179 vs. ExPASy TrEMBL
Match: A0A0K9QUA8 (Small nuclear ribonucleoprotein E OS=Spinacia oleracea OX=3562 GN=SOVF_140750 PE=3 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 6.1e-33 Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of MELO3C013179 vs. ExPASy TrEMBL
Match: A2YR87 (Small nuclear ribonucleoprotein E OS=Oryza sativa subsp. indica OX=39946 GN=OsI_27814 PE=3 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.0e-32 Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of MELO3C013179 vs. TAIR 10
Match: AT4G30330.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 137.1 bits (344), Expect = 6.1e-33 Identity = 72/88 (81.82%), Postives = 77/88 (87.50%), Query Frame = 0
BLAST of MELO3C013179 vs. TAIR 10
Match: AT2G18740.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 135.2 bits (339), Expect = 2.3e-32 Identity = 71/88 (80.68%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of MELO3C013179 vs. TAIR 10
Match: AT2G18740.2 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 104.8 bits (260), Expect = 3.3e-23 Identity = 55/71 (77.46%), Postives = 59/71 (83.10%), Query Frame = 0
BLAST of MELO3C013179 vs. TAIR 10
Match: AT5G48870.1 (Small nuclear ribonucleoprotein family protein ) HSP 1 Score: 46.2 bits (108), Expect = 1.4e-05 Identity = 22/62 (35.48%), Postives = 38/62 (61.29%), Query Frame = 0
BLAST of MELO3C013179 vs. TAIR 10
Match: AT4G20440.1 (small nuclear ribonucleoprotein associated protein B ) HSP 1 Score: 43.9 bits (102), Expect = 7.0e-05 Identity = 26/80 (32.50%), Postives = 44/80 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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