MELO3C013036 (gene) Melon (DHL92) v4

Overview
NameMELO3C013036
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionOrf122b protein
Locationchr04: 16108977 .. 16109168 (-)
RNA-Seq ExpressionMELO3C013036
SyntenyMELO3C013036
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGTTGTCACACTCCCTACCTTCCAAAGGTGCCTGGAGGACGGGCTAGACGCAACAGAGCGAGAACCTGGGAGTGGATTCCTCACGGGCAGGGGTACAAGAGACGACCATCTTGAGACATATCACGACCTACAAGCAAGACCAGCGAGATTGGGAGGGCAAGTCGATTGGGAGTTAGAGGATCCATAG

mRNA sequence

ATGTACGTTGTCACACTCCCTACCTTCCAAAGGTGCCTGGAGGACGGGCTAGACGCAACAGAGCGAGAACCTGGGAGTGGATTCCTCACGGGCAGGGGTACAAGAGACGACCATCTTGAGACATATCACGACCTACAAGCAAGACCAGCGAGATTGGGAGGGCAAGTCGATTGGGAGTTAGAGGATCCATAG

Coding sequence (CDS)

ATGTACGTTGTCACACTCCCTACCTTCCAAAGGTGCCTGGAGGACGGGCTAGACGCAACAGAGCGAGAACCTGGGAGTGGATTCCTCACGGGCAGGGGTACAAGAGACGACCATCTTGAGACATATCACGACCTACAAGCAAGACCAGCGAGATTGGGAGGGCAAGTCGATTGGGAGTTAGAGGATCCATAG

Protein sequence

MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWELEDP
Homology
BLAST of MELO3C013036 vs. NCBI nr
Match: KAA0061104.1 (hypothetical protein E6C27_scaffold348G00150 [Cucumis melo var. makuwa] >TYK03774.1 hypothetical protein E5676_scaffold863G001590 [Cucumis melo var. makuwa])

HSP 1 Score: 139.8 bits (351), Expect = 8.0e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL 60
          MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL
Sbjct: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL 60

Query: 61 EDP 64
          EDP
Sbjct: 61 EDP 63

BLAST of MELO3C013036 vs. NCBI nr
Match: AEN56135.1 (hypothetical protein [Cucumis melo subsp. melo] >AZP40307.1 hypothetical protein [Cucumis melo var. momordica])

HSP 1 Score: 93.2 bits (230), Expect = 8.6e-16
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE YHDLQARPAR G
Sbjct: 29 VYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPG 81

BLAST of MELO3C013036 vs. NCBI nr
Match: KAE8646151.1 (hypothetical protein Csa_016140, partial [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 8.6e-16
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE YHDLQARPAR G
Sbjct: 3  VYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPG 55

BLAST of MELO3C013036 vs. NCBI nr
Match: YP_009935537.1 (hypothetical protein SAMUK_000310 [Sapindus mukorossi] >QNS26097.1 hypothetical protein SAMUK_000310 [Sapindus mukorossi])

HSP 1 Score: 92.8 bits (229), Expect = 1.1e-15
Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVVTLP FQRCLEDG DA ER+PGSGF TGRGT D HLE +HDLQARPAR G
Sbjct: 29 VYVVTLPVFQRCLEDGPDAAERQPGSGFPTGRGTGDGHLEAHHDLQARPARPG 81

BLAST of MELO3C013036 vs. NCBI nr
Match: CBI14783.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 92.0 bits (227), Expect = 1.9e-15
Identity = 42/53 (79.25%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
           +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE +HDLQARPAR G
Sbjct: 68  VYVVTLPAFQRCLEDGPDAAERRPGSGFPTGRGTGDGHLEAHHDLQARPARPG 120

BLAST of MELO3C013036 vs. ExPASy TrEMBL
Match: A0A5D3BXH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001590 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.9e-30
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL 60
          MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL
Sbjct: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLGGQVDWEL 60

Query: 61 EDP 64
          EDP
Sbjct: 61 EDP 63

BLAST of MELO3C013036 vs. ExPASy TrEMBL
Match: G3EU45 (Uncharacterized protein ORF3 OS=Cucumis melo subsp. melo OX=412675 GN=ORF3 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.2e-16
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE YHDLQARPAR G
Sbjct: 29 VYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPG 81

BLAST of MELO3C013036 vs. ExPASy TrEMBL
Match: A0A3S9JIJ2 (Uncharacterized protein OS=Cucumis melo var. momordica OX=2034244 GN=ORF5 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.2e-16
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE YHDLQARPAR G
Sbjct: 29 VYVVTLPAFQRCLEDGPDAAERGPGSGFPTGRGTGDGHLEAYHDLQARPARPG 81

BLAST of MELO3C013036 vs. ExPASy TrEMBL
Match: A0A7H1CQT9 (Uncharacterized protein OS=Sapindus mukorossi OX=57655 GN=orf101b PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.4e-16
Identity = 42/53 (79.25%), Postives = 45/53 (84.91%), Query Frame = 0

Query: 1  MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
          +YVVTLP FQRCLEDG DA ER+PGSGF TGRGT D HLE +HDLQARPAR G
Sbjct: 29 VYVVTLPVFQRCLEDGPDAAERQPGSGFPTGRGTGDGHLEAHHDLQARPARPG 81

BLAST of MELO3C013036 vs. ExPASy TrEMBL
Match: B6VJZ2 (ORF145 OS=Vitis vinifera OX=29760 GN=orf145 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.3e-16
Identity = 42/53 (79.25%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1   MYVVTLPTFQRCLEDGLDATEREPGSGFLTGRGTRDDHLETYHDLQARPARLG 54
           +YVVTLP FQRCLEDG DA ER PGSGF TGRGT D HLE +HDLQARPAR G
Sbjct: 68  VYVVTLPAFQRCLEDGPDAAERRPGSGFPTGRGTGDGHLEAHHDLQARPARPG 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0061104.18.0e-30100.00hypothetical protein E6C27_scaffold348G00150 [Cucumis melo var. makuwa] >TYK0377... [more]
AEN56135.18.6e-1681.13hypothetical protein [Cucumis melo subsp. melo] >AZP40307.1 hypothetical protein... [more]
KAE8646151.18.6e-1681.13hypothetical protein Csa_016140, partial [Cucumis sativus][more]
YP_009935537.11.1e-1579.25hypothetical protein SAMUK_000310 [Sapindus mukorossi] >QNS26097.1 hypothetical ... [more]
CBI14783.31.9e-1579.25unnamed protein product, partial [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BXH83.9e-30100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
G3EU454.2e-1681.13Uncharacterized protein ORF3 OS=Cucumis melo subsp. melo OX=412675 GN=ORF3 PE=4 ... [more]
A0A3S9JIJ24.2e-1681.13Uncharacterized protein OS=Cucumis melo var. momordica OX=2034244 GN=ORF5 PE=4 S... [more]
A0A7H1CQT95.4e-1679.25Uncharacterized protein OS=Sapindus mukorossi OX=57655 GN=orf101b PE=4 SV=1[more]
B6VJZ29.3e-1679.25ORF145 OS=Vitis vinifera OX=29760 GN=orf145 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR48161FAMILY NOT NAMEDcoord: 1..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013036.1MELO3C013036.1mRNA