Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTATTTCCAAAATTAGGGTTTCTCATTCTTCATTATCGTCATGGATGCAGCGGAACACCACAATCCCCAACCACCTTTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATCCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCTTCCGCCGTCAAATCCAGGGCCACCGCCCTTCTTTCTCCCGACGACGACGACGAAGATGATCCATGGTCCCCAACTTCCACACTACCAACCGATATCGTCACCGGAATATTGCCGGACGAGGACGCTCCGGCGATATGCGCGACGAGGAAGGGATTGAAATTGCCCGAATTTGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGCTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGAAGCCGAGAAGGAGAAGAAGAGCGGCAAAGAGGAGGAGAAACCTATCTTAGGTGAAGGTTTTGCTTGAAATTGTGTAGATGAATTTAGGTCAAAACTAGAACGGGGGTGGGTTGTGCTTGAAAATTTCTTGTTTTCACGTTGTTTGTGAATAGAGATGAGTTATTGATTTTGTTTTTCCGATCATAGACCATAGTGAGGTTTAGTAATTTCTTAGGTTTCAAATTAAAATTTGAACATTCCTAACAATAATAATCACCTAAATAAATATTTAAAAATTACATTCATAATCTTTTGCTATTTTAAATTCGTAAT
mRNA sequence
CTCTATTTCCAAAATTAGGGTTTCTCATTCTTCATTATCGTCATGGATGCAGCGGAACACCACAATCCCCAACCACCTTTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATCCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCTTCCGCCGTCAAATCCAGGGCCACCGCCCTTCTTTCTCCCGACGACGACGACGAAGATGATCCATGGTCCCCAACTTCCACACTACCAACCGATATCGTCACCGGAATATTGCCGGACGAGGACGCTCCGGCGATATGCGCGACGAGGAAGGGATTGAAATTGCCCGAATTTGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGCTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGAAGCCGAGAAGGAGAAGAAGAGCGGCAAAGAGGAGGAGAAACCTATCTTAGGTGAAGGTTTTGCTTGAAATTGTGTAGATGAATTTAGGTCAAAACTAGAACGGGGGTGGGTTGTGCTTGAAAATTTCTTGTTTTCACGTTGTTTGTGAATAGAGATGAGTTATTGATTTTGTTTTTCCGATCATAGACCATAGTGAGGTTTAGTAATTTCTTAGGTTTCAAATTAAAATTTGAACATTCCTAACAATAATAATCACCTAAATAAATATTTAAAAATTACATTCATAATCTTTTGCTATTTTAAATTCGTAAT
Coding sequence (CDS)
ATGGATGCAGCGGAACACCACAATCCCCAACCACCTTTCTTCGATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATCCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCTTCCGCCGTCAAATCCAGGGCCACCGCCCTTCTTTCTCCCGACGACGACGACGAAGATGATCCATGGTCCCCAACTTCCACACTACCAACCGATATCGTCACCGGAATATTGCCGGACGAGGACGCTCCGGCGATATGCGCGACGAGGAAGGGATTGAAATTGCCCGAATTTGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGCTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGAAGCCGAGAAGGAGAAGAAGAGCGGCAAAGAGGAGGAGAAACCTATCTTAGGTGAAGGTTTTGCTTGA
Protein sequence
MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDDDDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKACVVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA
Homology
BLAST of MELO3C012968 vs. NCBI nr
Match:
XP_008447517.1 (PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo] >KAA0050786.1 uncharacterized protein E6C27_scaffold404G00370 [Cucumis melo var. makuwa] >TYK08560.1 uncharacterized protein E5676_scaffold323G001030 [Cucumis melo var. makuwa])
HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD
Sbjct: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
Query: 61 DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC
Sbjct: 61 DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
Query: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA
Sbjct: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 154
BLAST of MELO3C012968 vs. NCBI nr
Match:
XP_038900451.1 (uncharacterized protein LOC120087668 [Benincasa hispida])
HSP 1 Score: 257.3 bits (656), Expect = 8.4e-65
Identity = 136/154 (88.31%), Postives = 138/154 (89.61%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
MDAAE HNP P FDQILPPRLEDAGLED ALPPDSIREAFFKAASAVKS ATALLSP D
Sbjct: 1 MDAAEQHNPNPGIFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAVKSTATALLSPSD 60
Query: 61 DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
D DDPWSPTSTLPTD+VTGILPD D PA+CAT KGLKLPE G DEVVIGGMEERRGKAC
Sbjct: 61 D--DDPWSPTSTLPTDVVTGILPDRDDPAVCATEKGLKLPEIGGDEVVIGGMEERRGKAC 120
Query: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
VVDGLEGLEIGDEA KEKKSGK EEKPILGEGFA
Sbjct: 121 VVDGLEGLEIGDEA-KEKKSGK-EEKPILGEGFA 150
BLAST of MELO3C012968 vs. NCBI nr
Match:
XP_011651498.1 (uncharacterized protein LOC105434906 [Cucumis sativus])
HSP 1 Score: 235.7 bits (600), Expect = 2.6e-58
Identity = 128/156 (82.05%), Postives = 135/156 (86.54%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
MDAAEHHNPQP FF QILPPRLEDAGLED ALPPDSIREAFFKAASAVKSRATA LS D
Sbjct: 1 MDAAEHHNPQPSFFHQILPPRLEDAGLEDSALPPDSIREAFFKAASAVKSRATARLSHSD 60
Query: 61 DDEDD-PWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKA 120
D++DD P SPTS LPT DEDAPAICAT+KGL+LPEFGKDEVVIGGMEERRGK
Sbjct: 61 DEDDDVPCSPTSALPT--------DEDAPAICATKKGLELPEFGKDEVVIGGMEERRGKG 120
Query: 121 CVVDGLEGLEIGDEAEKEKKSGKEE-EKPILGEGFA 155
CVVDGLEGLEIGD+AEKE SGKEE +KP+LGEGFA
Sbjct: 121 CVVDGLEGLEIGDDAEKE--SGKEEKKKPVLGEGFA 146
BLAST of MELO3C012968 vs. NCBI nr
Match:
XP_022949149.1 (uncharacterized protein LOC111452587 [Cucurbita moschata] >KAG7036479.1 hypothetical protein SDJN02_00096, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 229.9 bits (585), Expect = 1.4e-56
Identity = 118/160 (73.75%), Postives = 133/160 (83.12%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
MDAAE H +P FDQILPPRLEDAGLED ALPPDSIREAFFKAASA+KS ATA LS DD
Sbjct: 1 MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
Query: 61 DDE------DDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEE 120
++ +D WSPT++LPTD+VTGILP+ D PA CAT KGLKLPEF D VV+GGMEE
Sbjct: 61 GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120
Query: 121 RRGKACVVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
RRGK CVVD LEGLE+GDEA+K+KKSG+EEE+PIL EGFA
Sbjct: 121 RRGKGCVVDVLEGLEVGDEAKKKKKSGEEEEQPILAEGFA 160
BLAST of MELO3C012968 vs. NCBI nr
Match:
KAE8650731.1 (hypothetical protein Csa_023393 [Cucumis sativus])
HSP 1 Score: 229.2 bits (583), Expect = 2.5e-56
Identity = 125/153 (81.70%), Postives = 132/153 (86.27%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
MDAAEHHNPQP FF QILPPRLEDAGLED ALPPDSIREAFFKAASAVKSRATA LS D
Sbjct: 1 MDAAEHHNPQPSFFHQILPPRLEDAGLEDSALPPDSIREAFFKAASAVKSRATARLSHSD 60
Query: 61 DDEDD-PWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKA 120
D++DD P SPTS LPT DEDAPAICAT+KGL+LPEFGKDEVVIGGMEERRGK
Sbjct: 61 DEDDDVPCSPTSALPT--------DEDAPAICATKKGLELPEFGKDEVVIGGMEERRGKG 120
Query: 121 CVVDGLEGLEIGDEAEKEKKSGKEE-EKPILGE 152
CVVDGLEGLEIGD+AEKE SGKEE +KP+LGE
Sbjct: 121 CVVDGLEGLEIGDDAEKE--SGKEEKKKPVLGE 143
BLAST of MELO3C012968 vs. ExPASy TrEMBL
Match:
A0A5A7U9B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G001030 PE=4 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 5.3e-81
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD
Sbjct: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
Query: 61 DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC
Sbjct: 61 DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
Query: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA
Sbjct: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 154
BLAST of MELO3C012968 vs. ExPASy TrEMBL
Match:
A0A1S3BI85 (uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=4 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 5.3e-81
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD
Sbjct: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
Query: 61 DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC
Sbjct: 61 DDEDDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKAC 120
Query: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA
Sbjct: 121 VVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 154
BLAST of MELO3C012968 vs. ExPASy TrEMBL
Match:
A0A0A0LDD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1)
HSP 1 Score: 235.7 bits (600), Expect = 1.3e-58
Identity = 128/156 (82.05%), Postives = 135/156 (86.54%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
MDAAEHHNPQP FF QILPPRLEDAGLED ALPPDSIREAFFKAASAVKSRATA LS D
Sbjct: 1 MDAAEHHNPQPSFFHQILPPRLEDAGLEDSALPPDSIREAFFKAASAVKSRATARLSHSD 60
Query: 61 DDEDD-PWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEERRGKA 120
D++DD P SPTS LPT DEDAPAICAT+KGL+LPEFGKDEVVIGGMEERRGK
Sbjct: 61 DEDDDVPCSPTSALPT--------DEDAPAICATKKGLELPEFGKDEVVIGGMEERRGKG 120
Query: 121 CVVDGLEGLEIGDEAEKEKKSGKEE-EKPILGEGFA 155
CVVDGLEGLEIGD+AEKE SGKEE +KP+LGEGFA
Sbjct: 121 CVVDGLEGLEIGDDAEKE--SGKEEKKKPVLGEGFA 146
BLAST of MELO3C012968 vs. ExPASy TrEMBL
Match:
A0A6J1GBZ4 (uncharacterized protein LOC111452587 OS=Cucurbita moschata OX=3662 GN=LOC111452587 PE=4 SV=1)
HSP 1 Score: 229.9 bits (585), Expect = 7.0e-57
Identity = 118/160 (73.75%), Postives = 133/160 (83.12%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
MDAAE H +P FDQILPPRLEDAGLED ALPPDSIREAFFKAASA+KS ATA LS DD
Sbjct: 1 MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSIREAFFKAASAIKSTATAFLSSDD 60
Query: 61 DDE------DDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEE 120
++ +D WSPT++LPTD+VTGILP+ D PA CAT KGLKLPEF D VV+GGMEE
Sbjct: 61 GEDSDGYGVEDNWSPTASLPTDVVTGILPELDPPAACATDKGLKLPEFNVDGVVVGGMEE 120
Query: 121 RRGKACVVDGLEGLEIGDEAEKEKKSGKEEEKPILGEGFA 155
RRGK CVVD LEGLE+GDEA+K+KKSG+EEE+PIL EGFA
Sbjct: 121 RRGKGCVVDVLEGLEVGDEAKKKKKSGEEEEQPILAEGFA 160
BLAST of MELO3C012968 vs. ExPASy TrEMBL
Match:
A0A6J1K989 (uncharacterized protein LOC111492831 OS=Cucurbita maxima OX=3661 GN=LOC111492831 PE=4 SV=1)
HSP 1 Score: 196.8 bits (499), Expect = 6.5e-47
Identity = 102/146 (69.86%), Postives = 114/146 (78.08%), Query Frame = 0
Query: 1 MDAAEHHNPQPPFFDQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDD 60
MDAAE H +P FDQILPPRLEDAGLED ALPPDSI EAFFKAASA+KS AT LS D+
Sbjct: 1 MDAAEEHQSKPGLFDQILPPRLEDAGLEDCALPPDSICEAFFKAASAIKSTATGFLSSDE 60
Query: 61 DDE------DDPWSPTSTLPTDIVTGILPDEDAPAICATRKGLKLPEFGKDEVVIGGMEE 120
D+ +D WSPT+ L TD+VTGI P+ D PA CAT KGLKLPEF D VV+GGMEE
Sbjct: 61 GDDSDGYGVEDKWSPTAALSTDVVTGIWPELDPPAACATDKGLKLPEFDLDGVVVGGMEE 120
Query: 121 RRGKACVVDGLEGLEIGDEAEKEKKS 141
RRGK C VD LEGLE+GDEA+K+KKS
Sbjct: 121 RRGKGCAVDVLEGLEVGDEAKKKKKS 146
BLAST of MELO3C012968 vs. TAIR 10
Match:
AT1G15230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 26 Blast hits to 26 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 82.0 bits (201), Expect = 4.5e-16
Identity = 70/148 (47.30%), Postives = 86/148 (58.11%), Query Frame = 0
Query: 15 DQILPPRLEDAGLEDPALPPDSIREAFFKAASAVKSRATALLSPDDDDEDDPWSPTSTLP 74
D ILPP L DAGLED ALPP+SI+EAF KAA+AVKSRA ++ +++D T
Sbjct: 12 DTILPPALADAGLEDCALPPESIQEAFRKAANAVKSRAASIFDHEEEDGCLADPIPETAD 71
Query: 75 TDIVTGILPDEDAPAICATRKGL-KLPEFGK--DEVVIGGMEERRGKACVVDGLEGLEI- 134
IV G + P C KG+ KL E + D VV G EE GK+C VDGL+ L++
Sbjct: 72 KIIVGGDNERDTGP--CLAGKGIEKLAESKQAGDLVVAGEGEE--GKSC-VDGLKDLDVE 131
Query: 135 GDEAEKEKK-----SGKEEEKPILGEGF 154
G E EKK +EE KPIL EGF
Sbjct: 132 GIERSSEKKDQSDEDEEEEMKPILVEGF 154
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008447517.1 | 1.1e-80 | 100.00 | PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo] >KAA0050786.1 unc... | [more] |
XP_038900451.1 | 8.4e-65 | 88.31 | uncharacterized protein LOC120087668 [Benincasa hispida] | [more] |
XP_011651498.1 | 2.6e-58 | 82.05 | uncharacterized protein LOC105434906 [Cucumis sativus] | [more] |
XP_022949149.1 | 1.4e-56 | 73.75 | uncharacterized protein LOC111452587 [Cucurbita moschata] >KAG7036479.1 hypothet... | [more] |
KAE8650731.1 | 2.5e-56 | 81.70 | hypothetical protein Csa_023393 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U9B5 | 5.3e-81 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BI85 | 5.3e-81 | 100.00 | uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=... | [more] |
A0A0A0LDD6 | 1.3e-58 | 82.05 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1 | [more] |
A0A6J1GBZ4 | 7.0e-57 | 73.75 | uncharacterized protein LOC111452587 OS=Cucurbita moschata OX=3662 GN=LOC1114525... | [more] |
A0A6J1K989 | 6.5e-47 | 69.86 | uncharacterized protein LOC111492831 OS=Cucurbita maxima OX=3661 GN=LOC111492831... | [more] |
Match Name | E-value | Identity | Description | |
AT1G15230.1 | 4.5e-16 | 47.30 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |