MELO3C012962 (gene) Melon (DHL92) v4

Overview
NameMELO3C012962
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr04: 14957800 .. 14958178 (+)
RNA-Seq ExpressionMELO3C012962
SyntenyMELO3C012962
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCACAACCCAAAACAATCGAATATTCATAATGGAGTTGAGTTGTGTGCGGTGGTCCGGCAGCCGTGTGTATGTGGCAGCCGGGGTTTTGAGGTGCAAGGCGGGGCCGACGCCGGAGATGAAGAAGAAGAAGAAGAAGATGATGATTATGGGGAGATGGAGAATGGTGTGGAGAAGGATGAAGAAGAGAATAATAATGTTATGGAGATGCAGAGCACATGAGATGCGGGTGCAGGGGTACGATCGAGAGAGTTATTTACAGAATTTTGATGATGGGTTTACGATGATGATGATGATGGGAGCCATTGGTGAGGATTCTGATGTCATTTCTCGATCTTTCTCTGCTCGTTTCGCCATTTCTCGTCCTTTGTCCTCTTAG

mRNA sequence

CTCCACAACCCAAAACAATCGAATATTCATAATGGAGTTGAGTTGTGTGCGGTGGTCCGGCAGCCGTGTGTATGTGGCAGCCGGGGTTTTGAGGTGCAAGGCGGGGCCGACGCCGGAGATGAAGAAGAAGAAGAAGAAGATGATGATTATGGGGAGATGGAGAATGGTGTGGAGAAGGATGAAGAAGAGAATAATAATGTTATGGAGATGCAGAGCACATGAGATGCGGGTGCAGGGGTACGATCGAGAGAGTTATTTACAGAATTTTGATGATGGGTTTACGATGATGATGATGATGGGAGCCATTGGTGAGGATTCTGATGTCATTTCTCGATCTTTCTCTGCTCGTTTCGCCATTTCTCGTCCTTTGTCCTCTTAG

Coding sequence (CDS)

ATGGAGTTGAGTTGTGTGCGGTGGTCCGGCAGCCGTGTGTATGTGGCAGCCGGGGTTTTGAGGTGCAAGGCGGGGCCGACGCCGGAGATGAAGAAGAAGAAGAAGAAGATGATGATTATGGGGAGATGGAGAATGGTGTGGAGAAGGATGAAGAAGAGAATAATAATGTTATGGAGATGCAGAGCACATGAGATGCGGGTGCAGGGGTACGATCGAGAGAGTTATTTACAGAATTTTGATGATGGGTTTACGATGATGATGATGATGGGAGCCATTGGTGAGGATTCTGATGTCATTTCTCGATCTTTCTCTGCTCGTTTCGCCATTTCTCGTCCTTTGTCCTCTTAG

Protein sequence

MELSCVRWSGSRVYVAAGVLRCKAGPTPEMKKKKKKMMIMGRWRMVWRRMKKRIIMLWRCRAHEMRVQGYDRESYLQNFDDGFTMMMMMGAIGEDSDVISRSFSARFAISRPLSS
Homology
BLAST of MELO3C012962 vs. NCBI nr
Match: KGN58151.2 (hypothetical protein Csa_023395 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 4.8e-49
Identity = 102/115 (88.70%), Postives = 107/115 (93.04%), Query Frame = 0

Query: 1   MELSCVRWSGSRVYVAAGVLRCKAGPTPEMKKKKKKMMIMGRWRMVWRRMKKRIIMLWRC 60
           M+LSC+RWS SRVYVAAGVLRC+A PTPEMKKK    M+MGRWRMVWRR+KKRIIM WRC
Sbjct: 1   MDLSCMRWSSSRVYVAAGVLRCRAAPTPEMKKK----MMMGRWRMVWRRIKKRIIMSWRC 60

Query: 61  RAHEMRVQGYDRESYLQNFDDGFTMMMMMGAIGEDSDVISRSFSARFAISRPLSS 116
           RAHEMRVQGYDRESYLQNFDDGFTMMMMMGA GEDSDVISRSFSARFAISRPLSS
Sbjct: 61  RAHEMRVQGYDRESYLQNFDDGFTMMMMMGATGEDSDVISRSFSARFAISRPLSS 111

BLAST of MELO3C012962 vs. NCBI nr
Match: TYK08570.1 (uncharacterized protein E5676_scaffold323G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 90.9 bits (224), Expect = 7.8e-15
Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0

Query: 69  GYDRESYLQNFDDGFT-MMMMMGAIGEDSDVISRSFSARFAISRPLSS 116
           GYDRESYLQNFDDGFT MMMMMGAIGEDSDVISRSFSARFAISRPLSS
Sbjct: 689 GYDRESYLQNFDDGFTMMMMMMGAIGEDSDVISRSFSARFAISRPLSS 736

BLAST of MELO3C012962 vs. NCBI nr
Match: KAG7036482.1 (hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-07
Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = 0

Query: 1   MELSCVRWSGSRV-YVAAGVLRCKAGPTPEMKKKKKKMMIMGRWRMVWRRMKKRIIMLWR 60
           M LSC+R +G  + YV  G     +  T  + +K        RWR+VWRR+KK    ++R
Sbjct: 1   MNLSCLRGAGGGIGYVERGYY---SAVTVAVLEK-----TTARWRVVWRRLKKEKKRMFR 60

Query: 61  C---RAHEMRVQGYDRESYLQNFDDGFTMMMMMGAIGEDSDVISRSFSARFAIS 111
           C    A E+ V  Y+ ++YLQNFDDG   +MM+G   +D D ISRSFSARFAIS
Sbjct: 61  CGMSGAREVHVP-YNPKTYLQNFDDG--SVMMVG--DDDPDAISRSFSARFAIS 101

BLAST of MELO3C012962 vs. NCBI nr
Match: KAG6606769.1 (hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-07
Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = 0

Query: 1   MELSCVRWSGSRV-YVAAGVLRCKAGPTPEMKKKKKKMMIMGRWRMVWRRMKKRIIMLWR 60
           M LSC+R +G  + YV  G     +  T  + +K        RWR+VWRR+KK    ++R
Sbjct: 1   MNLSCLRGAGGGIGYVERGYY---SAVTVAVLEK-----TTSRWRVVWRRLKKEKKRMFR 60

Query: 61  C---RAHEMRVQGYDRESYLQNFDDGFTMMMMMGAIGEDSDVISRSFSARFAIS 111
           C    A E+ V  Y+ ++YLQNFDDG   +MM+G   +D D ISRSFSARFAIS
Sbjct: 61  CGMSGAREVHVP-YNPKTYLQNFDDG--SVMMVG--DDDPDAISRSFSARFAIS 101

BLAST of MELO3C012962 vs. ExPASy TrEMBL
Match: A0A0A0LAV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G481240 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.1e-41
Identity = 90/101 (89.11%), Postives = 94/101 (93.07%), Query Frame = 0

Query: 15  VAAGVLRCKAGPTPEMKKKKKKMMIMGRWRMVWRRMKKRIIMLWRCRAHEMRVQGYDRES 74
           V+AGVLRC+A PTPEMKKK    M+MGRWRMVWRR+KKRIIM WRCRAHEMRVQGYDRES
Sbjct: 19  VSAGVLRCRAAPTPEMKKK----MMMGRWRMVWRRIKKRIIMSWRCRAHEMRVQGYDRES 78

Query: 75  YLQNFDDGFTMMMMMGAIGEDSDVISRSFSARFAISRPLSS 116
           YLQNFDDGFTMMMMMGA GEDSDVISRSFSARFAISRPLSS
Sbjct: 79  YLQNFDDGFTMMMMMGATGEDSDVISRSFSARFAISRPLSS 115

BLAST of MELO3C012962 vs. ExPASy TrEMBL
Match: A0A5D3CB48 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G001140 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.8e-15
Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0

Query: 69  GYDRESYLQNFDDGFT-MMMMMGAIGEDSDVISRSFSARFAISRPLSS 116
           GYDRESYLQNFDDGFT MMMMMGAIGEDSDVISRSFSARFAISRPLSS
Sbjct: 689 GYDRESYLQNFDDGFTMMMMMMGAIGEDSDVISRSFSARFAISRPLSS 736

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN58151.24.8e-4988.70hypothetical protein Csa_023395 [Cucumis sativus][more]
TYK08570.17.8e-1597.92uncharacterized protein E5676_scaffold323G001140 [Cucumis melo var. makuwa][more]
KAG7036482.12.7e-0744.74hypothetical protein SDJN02_00099, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6606769.12.7e-0744.74hypothetical protein SDJN03_00111, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LAV83.1e-4189.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G481240 PE=4 SV=1[more]
A0A5D3CB483.8e-1597.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33168STRESS INDUCED PROTEIN-RELATEDcoord: 28..113
NoneNo IPR availablePANTHERPTHR33168:SF70OS01G0182300 PROTEINcoord: 28..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012962.1MELO3C012962.1mRNA