MELO3C012937 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012937
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	cytochrome c oxidase subunit 5b-1, mitochondrial-like
Location	chr04: 14551497 .. 14558955 (-)
RNA-Seq Expression	MELO3C012937
Synteny	MELO3C012937

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATATACACTCAAAAACCTATTATGTCTTATTGACTACTATAACCTACCCTCGAACCACCCTTTAAAAGTTCAATTTGAAAAAATGAGATAAATTTAGAGTTGAAAAATTCATTTTTCATTCCCAATTTAAAATAGTTGCAGCACGTGCAACATATTTTGACTCGTGCGAAATCATTTTGGTTAATCGCCTCCTCCTCTTGACTAGTTCCGCCTTTTTCTTTTCTCCCATTTCCAAAAGCATAGAAACTGCTGAAAGGGCGAGAGAGTGAAGAGCAAAAGAGAGCCAAATTCGCCGTTCAAGAGGTGCGACCTGAGATCATAGCCGGAGTATTCACCGTTTTCAATCTACGATGTGGAGAAGATTGCTCTCTTCGTCGCTCAAATCCTTAAAATCTCTTCCCTCTTCATCGACGCCTGCATCCGCTCCGTTGGGATGCATTTCCCAAGCCGCTCGACTCGGTGCTGCTTCTCATCTTTCTCCTTCCTCGACTGTCTCGCTTTTCGCTCGCCATTACGCCTCTGATTCTGGTAGATCTTGCCGTTTTCTTCGGATTTTATGCTCCCTTCATATATATGTGGAATGAATTGCTCGTCTGATTATTAATCGATTACTATCGTACAGTCGTATCGATCTATAGTATGAGCAGGAATGTTGTTTTTGTTTTCTGTGGTTGTTAATTGATTTCTTAATGTAGCTGATACTGGTCTGAAGAAGAAGGTTGAGGATGTTATGCCAATCGCAACCGGACACGAGCGTGAAGAGCTTGAAGCTTCTCTTGAGGTGAAGTATCTTGTATTTTCTTGCTTACCGGGATCTCTTTCCGCTGCGTGTTGTTTTTCCCACGCTTCATTTCACGTTGTGAAATTTACTGGATTAAAGAGTAGTTTAAAATTTATGGATTCATTTTGATTGTCAAACTGAGCCTGGCATGGTAATTTTCAGTTTCGGAAAGCCAGGTTAAAAATTTTATGCCTTCATTGGTTGGTTCATTTTCATTTTCAAACTGAGCGGTTTATGTTCATATTTTTTATAAGCTGGCTTCTGATGGATGTGTTTTTCGTATTGGATGCAAGTCTCATTTTAGTCGGTTTAACGTTTGCAGGGAAAAGACATACTTGACATAAATCATCCTGTTGGCCCCTTTGGAACTAAGGTTGGTGTAGTTGCTTGTTTTGTCGTTTTTAGAATTAACTTCGATGCTTTATCTTTTATTCAAAGTTTCATCCCATGTAGATATCAAGGCATCGCAAGATAGCAATATTTATTGAGTTTACTGCTTTCACTTGAATTTAAGCTGCACTTTTGTCATGCTACATTGAGATCTCGGACACTCTGAGATATCTGCAAACTGATTGTTCTGAATTTTGGTCTGCAGTTATTTTACCTTCCATCTCCTGACTATCCATACCATTTTTCTTTCATGCTCTATGGCACATCATAACTTAGTAAACAACAAGAAAATTCAAAGTTAATGAGTTTGTGGATTTAAATGCTTAAAAAATTAGTTAAATGTATTTCATTTTCAAAATTGTTTACTTTTGTCATATATGTGTCTACTTGGTATATGTAACGAGTGTTTGATGCATGTCTAACAAATGTTGGTCTTGTGTTGACTTTGTACAACTAGACACATCTATTTTACTAATAAGTGTCCTATGTTGAGTTTGTAGTACGTGTAAAATGTGTCTGCATGTTGATACATTTATGAGGTGGATACACCGGCCAAACTTAAGTGTCCATGCTTCTTAGCATTTAGAACGAAGAATCTATGCAAGTTCTGATATTGGTCTCACTTCTAGCATTCCCTCATAGCTTTTATTGTTCTGCAAGAGTATCTAACCTAAATCAAGTCTAGAGAATAAGGTCATTCAAAGAATCTTAAGCTTCCTTTTAAAGCAATAACCGAAAATCTTATGCTCCTCTTCTAAACCCTACCTTTTGCATCTTGTGTATCCTTTTCAAAAATTTTAACTTTTTCTGGTTGAAAAAAATTGTGGTCTTGATTCTTGAAGAGTTAAATGCTTGTCATTGGCTGTAAAAACTGTCTCTCTTGCTTCCGTTCTTCGAAGTCTGAACTCCTAAGTGTTGATTATTTATTACAAAGCATATGAACTAGTGATATAATTCTCAGTGTTGTGATCTTTTGTAGTTTTTGTGCCAATGCCTCTTCACTTGATGTTTTTTTTTGGGTACTTCAAGAGTGCATTCTCTCTGCCTTTTGGTTTTAGATGTATGAGTATCAACTCTTTATTATAACCATTATGGGTTGGTCTAGTAGTAAAAAAGGAGACACAATCTAAATAACTAACTAAAAGGTCATAGGTTCAATCCATGGTGGCTACCTGCCTAGGAATTAATTTCTATGAGTTTCTTTGACACCAAAATGTTATAGGATCGGGCGGGTTGTCCCTTGAGGTTGAGATACGTCTAAGCTGGCTCGGACATTCACGGATGTAAGAAAAAAGTTTGAACTCTTTGTTGCACAATTTAGGTAGGAACTTTTCACCTCATTTTGGAAGATAACTCTGTAGATTGGAAAGTTGTTTGTTGAAATAATCTTATTATATCTTGCTGGTCTGAAAATGTAGCAAGGATGGCCACATCGATTGAGGCCCTAGGTGTCGAACCTTGGCTTTGTGCTTTGGCCGGAAGCTTTCTCCTTGGTCTTTCAAAGTTGGAATATAAGGTGCATGAAGTAAGGTTCTCCTAATCTTTGAACAACCAACATTGGAAGAAGAGAATCCATAACATTATAAGGGCAAACAAAACTAAAGTTCGAGACTTTTGAAAATTTTGCCTATAGCCTTAGAGATATGGGAGTTCAAGAAGAGGTGTGTACTTTGGGAAAGAATGGTTATGTTGGATACAAATAAGAGGTGATACTTCTTGAACGTAATCATATCGAATTAAACCCTTTGAAGAAAGCAGACTAAAGGAACACCTTGTACTTTCTAGGAACCTTTGGTATGCAAAACCTTTTTTCATAAATCCAAAAGAAGATAGGTTTTTTCCCTCTCTCTCCCTACCTCCCTCTCACTCCCTCCCTCTCCCTCCCTCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCTCCCCGAAACCACAATATAATAAACATAGCTAACTGACAATGCACTTGAAGTGGAATTTCAAACTCTCAGAATCCTGGTTTTAAGGAGACTGAAAACAAACATGATAATAAGGTTCATCCTCTCTTCGATTTCCCTGTAGCTGTGCTACTTTCTGTTTTTTTGAAATGCGACTTTGGTGGTGATTAGCCTCATCCCACAAGTCTTGAACTAGAGGTTTTTTGAGCTGGTATCTGTTATGATATCGATAGTATCTTATATTTCTATTAAGTTCCTCAACGATTACAAGAGAGAAAACGTTCACGCCAACACTAACAAAGATCCACAAGGATCAACACAACAGAACAGACCAGAGAAATATCCAGAAAACGTAAAGATAAATTCAAAGAACTCTAGAAAAAAATAACAAGAGCGAAAGAACTTGGCACTTTGTCTTCCTTCTCACGCAAGGAGGAATTCAGCCCTTCCTCTTCACCACAAAAACTTCGGTACCCTCCCTACTCTTCTTCCCACCTTTTATCCTCCACTACTAACTAACTGTGGACCCCACCAGGCTGGTCCCCAACTTCCTTGCTATCCTCCCCACTCCCACGTGTACCTTCCTCATTTGCTTCTGGCTTTTTCTTATTCCTTCTATTATATGTGAATAAAATTGGAGGTCTAGCATCACTCTCCTCCTCTAAATCCACCTTGTCCATTAGGTGGAAATCCGGGAACTGCTGTTTGAAATCTGCAGTCTTCCCAAGTTGCTTCGTCTTGGGGAAGTCCCTTCCAGCTGATGAGTACTTCCCACTCCTTGGTAGTAGGGTTCTTGTGATAGCCAAATACTTCTTCGGGCCTTGTTGTCTACTCATGATTTACATTCACGTAAGGGTCAAGTGGCTGCACCTGTTCAAGCTTTCCCACTGCCTTTTTGAGTTGAGAAACGTGGAACACTGGATGAATGGCCGCTGTATTGGGGAGTTCCAACTTGTAAGCCAATGTCCCAATTCTCTCTAGGACTTTGTATGGCCCAAAGTATTTTGGTGATAGCTTCTCATTACGCTTTCTTCTCAGTGACACTTGCCGATAGGGTCTGATATTAGGAACACCATATCTCCCAATTGGAATTCAACATCTCTTCATTTTAAATCTGCATACTTTTTCATCCTTTCTTGAGCCATTCGCAAATGCCCCTTTAAGGCCCCTAAGATCACATCTCTATCCTTCAGCTGTTGATCTAATGTTGAGTTGGGTGTTTCCATGTCTCCATATTGAATCAAGGGTGGGGGTAGTCTCCCATATACAGCTTGGAACGGTCTAAGCCCGATGGAGCTGTGGTATGTAGTGGTTTACCAATATTCTGCCCAATGTATCCACTGACTCCGTTCCTTTGGTTTTTCCCCACATAAACACCTCAAGTAGGCTTCCACACTCTTGTTCACCACTTCTGTCTGCCCATCTGATTGGGGATAGGCTGTTTATTTTAAGACCAGAACCTTCTTCAAATTGGCCAATTAAGGAAAGGAGATTAACAATATATCTTCTTTGTTGGTGGAGAAAGACCACAACAAGTGAGGAGAGAGAAATTATAAGATTTGGATTCTTTTCCATTCCAATATTTAGGCCTAGTTCGATAAACCATGTAGGTCTCGTTTGGTCACCATTTCGTTTTTGTTTTTGAAAATTAAACCTATTTTCTTTCTATGTCTTACAATGATTTGTATCTTTCTTAAATACAATGGTTGACTTCTTAGCCAAATTCAAAAAATAAAACAACTTTTTGAAAGCTACTTCTTTTAGTTTTTAAAATTTGGCTTGGTTTTTTAAACCATTGGTAGAATGTAGATAACGAAGGAAGAAAGTTGAAGATGAAGGTAGTGTTTGTAAGCGTAGTTTTAAAAAATAAAATGCCAAACAAGGCCTTAGTTTTTGGTTTTCGATTTTTGAGAATTGTGCTTGTTTTTCTTACAATTTCTTTGCCATGGTTTATGTATTTCCAACCAAAACATTTTTAACCCTTAATCAAATTCCAAAAAAGCAAAAATAGCTATTTAAGTACTTTTTTCAAAAAAAGAATATCTTGGCTTAGTTTTTTAAATTAAGCTTATAAACACTACTTTTACTATTGATTTCTTTAATTTGTTATATGCTTTTTAGGAGTGTTTGTGCTTGTTTTTTTTACAATTTCTTTGCCATGGTTTATGTATTTCCAACCAAAACATTTTTAACTCTTAACCAAATTCCAAAAAAGCAAAAATAGCTATACTTTTTTTAAAAATAATATCTTAGCTTAGTTTTTGAAAACGCTCCTAAAAAGCATATAACAAATTAAAGAAATCAATAGTGAAAGTAGTGTTATAAGTTTAATTTAAAAAACAAAAAACTAAAATCAATTTGGTTATCAAACGACCCTTGTTGTTTTGATTCCTTATTTGATGATGAAATATGTTAAGTAGATCTAAGTGCATTGCTGCCATCTAAGTGGGGATTCTTACCGAGGTTTCTCCCACTTAAGTAGATCTATTGTTTATGCTTATGTTGTAGCTATGATATTGATCATTCACTTTTATGCTCTTATCCAAAAACTATTCACTTTTATGCGGTTGTTGATTTTCTGATCAGTTGTTTAATGATCCAAGGCTGGCTTTTCTTCTATGGAAAGAGCCTGTAACTTCCATTGCATCTTATGGTCCGTGCTTTACACAAAAAGACTGTGTTAGAGTATATGAATGAAAAGATTTTCTTGCATGACTTATTTCTGGGAGAAATCTTATACTTGTATTCCTTTAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGAATAGTTGGATGTCCTGGAGGTGAAGACGGTGAGTACTTGCAATCTCTTCCTTTCCATGGTTTTTCGCAACATTTGTGCAAGTCTAACCAAGTGTTACATAGGCTAATTTTGTGTTTCTTTTATTACACATTAGAATTTTCATCTTACTTCTGTTGCTTCCTTTCTAATTGTAGAGGATGAGCATGATGTTGTCTGGTTTCGGCTGAGGAAAGGAGTGCCACATGAGTGCCCTGTGTGCTCACAGTACTTTGTGGTGAGAATTCATTTTAAACTAGTATGTTATGTTGATGTATATTTCTTCACAAAATTTCAATTGGCATTTTCCAATCAGCATGTTCGGCTCCTTTTGGAGGGAAATGACACGATACTCAAAACTACTAAAATTGCAATACTATAACTATTGAAAGTGTTTTTAACTAATCTTGCAAATAGTTTTCAAGATTCTTTTTTGATGATTGTTGCCTACATAACCAAAAATGCTTAGATCAAAATCATGCTTTTTGAGAAATAAATTATTGGTAATCTTTTCATGTGTGTGTATGTATTAATAACTTAGTGTTTGTTATGTATAAAAAAAATGTGATATAGGAATTAAGAGTTCTCTCCCTCTTCCATGTTATCCTATACTCCTTCGATAGGATGTAGGCATTAGTGGTATATTAATAGCTTTGTCCTTTATATTCCAAAGAACAAGGCTTTTTCAAATATGCCTATTCATTTGGGATCCTAATCTTCATTCAACCTGCTGACCCACCGTTTCCTGTTCAAAAAAAAAAAAAATCTTTCCCATTCAAAGATCAGCCTTTTGCCTCTATGTTTTCACATCGAGCTAATCACGAGTTTTTCTAATTGTAATTTGTGTTTCACAGTTGGAAGTTGTGGGACCTGGAGGCTCGCCTGATGGTTATGGAGATGATGATCACCATCATTGATTAACAGTCATCCATCTCGAGAATAAAACTTGGCTTTTAGACGAAGAAACAGATATCACAATTGGTGCTATTTAAAGCTGTGTTTTGTTTGTTTTCTACTGTTCCTTGTTTCTTTTGCAGTTCCTTCAGCAACAAAAAGGAATTCTGAGTTTTTTCGAAGTCAGTCGCGGACACTGGCAACTCATCTGCTAGAAGTACAATTTTTTTTAGCTTTTCTTCTATGAATTTCCAAATAATTGAAGACATCTCAATTCTTTTCCAAACAAACTCCTTGATCTTAGAAAATAATCTCATGAACCTGCGGAAACAAATCGATTTTAGGAAGTTTGAAATGGCTGTATGGAAGTGGCTTTAGATGCCAACTCATTGCCACTTTTATTGCAAATCTTGTCCATTGTGTTTTGTTTTAATTTCTTTTTCATAACCCACTTTGTCCTTAAGACCTCTCTTCTTGATGTCAATGTGGGGCTTCAAGTCTTTCTTATAATTCTTTTTAAAATCTGTGATGCTGTTTGCTTAGTTTGGACTTTGTTGCTGAAAGTTAATTTGTTGAAAGAATATGTATTTTGAAAATTTTGGGTTTTTTTCTTTGACTTTTGGAAATTTTAGTAGTTTGTTGAAATCATG

mRNA sequence

ATAATATACACTCAAAAACCTATTATGTCTTATTGACTACTATAACCTACCCTCGAACCACCCTTTAAAAGTTCAATTTGAAAAAATGAGATAAATTTAGAGTTGAAAAATTCATTTTTCATTCCCAATTTAAAATAGTTGCAGCACGTGCAACATATTTTGACTCGTGCGAAATCATTTTGGTTAATCGCCTCCTCCTCTTGACTAGTTCCGCCTTTTTCTTTTCTCCCATTTCCAAAAGCATAGAAACTGCTGAAAGGGCGAGAGAGTGAAGAGCAAAAGAGAGCCAAATTCGCCGTTCAAGAGGTGCGACCTGAGATCATAGCCGGAGTATTCACCGTTTTCAATCTACGATGTGGAGAAGATTGCTCTCTTCGTCGCTCAAATCCTTAAAATCTCTTCCCTCTTCATCGACGCCTGCATCCGCTCCGTTGGGATGCATTTCCCAAGCCGCTCGACTCGGTGCTGCTTCTCATCTTTCTCCTTCCTCGACTGTCTCGCTTTTCGCTCGCCATTACGCCTCTGATTCTGCTGATACTGGTCTGAAGAAGAAGGTTGAGGATGTTATGCCAATCGCAACCGGACACGAGCGTGAAGAGCTTGAAGCTTCTCTTGAGGTGAAGTATCTTTTGGAAGTTGTGGGACCTGGAGGCTCGCCTGATGGTTATGGAGATGATGATCACCATCATTGATTAACAGTCATCCATCTCGAGAATAAAACTTGGCTTTTAGACGAAGAAACAGATATCACAATTGGTGCTATTTAAAGCTGTGTTTTGTTTGTTTTCTACTGTTCCTTGTTTCTTTTGCAGTTCCTTCAGCAACAAAAAGGAATTCTGAGTTTTTTCGAAGTCAGTCGCGGACACTGGCAACTCATCTGCTAGAAGTACAATTTTTTTTAGCTTTTCTTCTATGAATTTCCAAATAATTGAAGACATCTCAATTCTTTTCCAAACAAACTCCTTGATCTTAGAAAATAATCTCATGAACCTGCGGAAACAAATCGATTTTAGGAAGTTTGAAATGGCTGTATGGAAGTGGCTTTAGATGCCAACTCATTGCCACTTTTATTGCAAATCTTGTCCATTGTGTTTTGTTTTAATTTCTTTTTCATAACCCACTTTGTCCTTAAGACCTCTCTTCTTGATGTCAATGTGGGGCTTCAAGTCTTTCTTATAATTCTTTTTAAAATCTGTGATGCTGTTTGCTTAGTTTGGACTTTGTTGCTGAAAGTTAATTTGTTGAAAGAATATGTATTTTGAAAATTTTGGGTTTTTTTCTTTGACTTTTGGAAATTTTAGTAGTTTGTTGAAATCATG

Coding sequence (CDS)

ATGTGGAGAAGATTGCTCTCTTCGTCGCTCAAATCCTTAAAATCTCTTCCCTCTTCATCGACGCCTGCATCCGCTCCGTTGGGATGCATTTCCCAAGCCGCTCGACTCGGTGCTGCTTCTCATCTTTCTCCTTCCTCGACTGTCTCGCTTTTCGCTCGCCATTACGCCTCTGATTCTGCTGATACTGGTCTGAAGAAGAAGGTTGAGGATGTTATGCCAATCGCAACCGGACACGAGCGTGAAGAGCTTGAAGCTTCTCTTGAGGTGAAGTATCTTTTGGAAGTTGTGGGACCTGGAGGCTCGCCTGATGGTTATGGAGATGATGATCACCATCATTGA

Protein sequence

MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEVKYLLEVVGPGGSPDGYGDDDHHH

Homology

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BLAST of MELO3C012937 vs. NCBI nr
Match: KAA0038130.1 (cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa] >TYK20477.1 cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 8.6e-43
Identity = 109/174 (62.64%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVK------------------------------ 113
           DTGLKKKVEDVMPIATGHEREELEASLE K                              
Sbjct: 61  DTGLKKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERIV 120

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BLAST of MELO3C012937 vs. NCBI nr
Match: XP_016900404.1 (PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.0e-40
Identity = 108/189 (57.14%), Postives = 111/189 (58.73%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEV------------------------------- 113
           DTGLKKKVEDVMPIATGHEREELEASLE+                               
Sbjct: 61  DTGLKKKVEDVMPIATGHEREELEASLELFNDPRLAFLLWKEPVTSIASYGPNLILVFLX 120

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BLAST of MELO3C012937 vs. NCBI nr
Match: XP_004151243.1 (cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus] >KGN58136.1 hypothetical protein Csa_017499 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 6.8e-40
Identity = 104/174 (59.77%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQA RL AASHLSPSST+ LFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVK------------------------------ 113
           DTGLKK VEDVMPIATGHEREELEASLE K                              
Sbjct: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120

[Close]

BLAST of MELO3C012937 vs. NCBI nr
Match: XP_038896495.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 160.6 bits (405), Expect = 7.8e-36
Identity = 97/174 (55.75%), Postives = 102/174 (58.62%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRRLLSS LKSLKSLPSSSTPASAPLG IS+A R  A SH+SPS  VSLFA HYASDSA
Sbjct: 1   MWRRLLSSPLKSLKSLPSSSTPASAPLGYISKATRRAAVSHVSPSPAVSLFASHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVK------------------------------ 113
           DTGLKKKVED+MPIATGHEREELEASLE K                              
Sbjct: 61  DTGLKKKVEDIMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120

[Close]

BLAST of MELO3C012937 vs. NCBI nr
Match: XP_022956147.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita moschata] >XP_022980065.1 cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 159.1 bits (401), Expect = 2.3e-35
Identity = 97/174 (55.75%), Postives = 106/174 (60.92%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RLGAASH+SPS+ VSLFAR+YASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVK------------------------------ 113
            TG+ KKVEDVMPIATGHEREELEASLE K                              
Sbjct: 61  GTGV-KKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120

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BLAST of MELO3C012937 vs. ExPASy Swiss-Prot
Match: Q9SSB8 (Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-2 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-12
Identity = 57/172 (33.14%), Postives = 76/172 (44.19%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRR++SS LKS+ ++ S + P+       S    L   +   P+ + S+F+R   S +A
Sbjct: 1   MWRRIVSSHLKSISAVGSCAAPSCRHAVVESTHLSLSTRASSIPAYS-SIFSRLIGSAAA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVKYL---------------------------- 111
           DT +KK+VEDVMPIATGHE+EEL+A LE + L                            
Sbjct: 61  DTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRIV 120

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BLAST of MELO3C012937 vs. ExPASy Swiss-Prot
Match: Q9LW15 (Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-1 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.7e-12
Identity = 57/176 (32.39%), Postives = 77/176 (43.75%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRR++SS LK+L +   +++P  +            AA+  + S++  +  R ++SDS 
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDSV 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVKYL---------------------------- 113
           +T   KKVEDVMPIATGHE+EELEA LE + L                            
Sbjct: 61  ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRIV 120

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BLAST of MELO3C012937 vs. ExPASy TrEMBL
Match: A0A5A7T437 (Cytochrome c oxidase subunit 5b-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00500 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.2e-43
Identity = 109/174 (62.64%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVK------------------------------ 113
           DTGLKKKVEDVMPIATGHEREELEASLE K                              
Sbjct: 61  DTGLKKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERIV 120

[Close]

BLAST of MELO3C012937 vs. ExPASy TrEMBL
Match: A0A1S4DWP7 (LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5b-2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103489917 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.1e-41
Identity = 108/189 (57.14%), Postives = 111/189 (58.73%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEV------------------------------- 113
           DTGLKKKVEDVMPIATGHEREELEASLE+                               
Sbjct: 61  DTGLKKKVEDVMPIATGHEREELEASLELFNDPRLAFLLWKEPVTSIASYGPNLILVFLX 120

[Close]

BLAST of MELO3C012937 vs. ExPASy TrEMBL
Match: A0A0A0LDH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G538670 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.3e-40
Identity = 104/174 (59.77%), Postives = 107/174 (61.49%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQA RL AASHLSPSST+ LFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVK------------------------------ 113
           DTGLKK VEDVMPIATGHEREELEASLE K                              
Sbjct: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120

[Close]

BLAST of MELO3C012937 vs. ExPASy TrEMBL
Match: A0A6J1IV42 (cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479582 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 97/174 (55.75%), Postives = 106/174 (60.92%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RLGAASH+SPS+ VSLFAR+YASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVK------------------------------ 113
            TG+ KKVEDVMPIATGHEREELEASLE K                              
Sbjct: 61  GTGV-KKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120

[Close]

BLAST of MELO3C012937 vs. ExPASy TrEMBL
Match: A0A6J1GVI7 (cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111457927 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 97/174 (55.75%), Postives = 106/174 (60.92%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRRLL+S LKSLKSLPSSSTPASAPLGCIS+A RLGAASH+SPS+ VSLFAR+YASDSA
Sbjct: 1   MWRRLLASQLKSLKSLPSSSTPASAPLGCISKATRLGAASHVSPSAPVSLFARYYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVK------------------------------ 113
            TG+ KKVEDVMPIATGHEREELEASLE K                              
Sbjct: 61  GTGV-KKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120

[Close]

BLAST of MELO3C012937 vs. TAIR 10
Match: AT1G80230.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-13
Identity = 57/172 (33.14%), Postives = 76/172 (44.19%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRR++SS LKS+ ++ S + P+       S    L   +   P+ + S+F+R   S +A
Sbjct: 1   MWRRIVSSHLKSISAVGSCAAPSCRHAVVESTHLSLSTRASSIPAYS-SIFSRLIGSAAA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVKYL---------------------------- 111
           DT +KK+VEDVMPIATGHE+EEL+A LE + L                            
Sbjct: 61  DTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRIV 120

[Close]

BLAST of MELO3C012937 vs. TAIR 10
Match: AT3G15640.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.6e-13
Identity = 57/176 (32.39%), Postives = 77/176 (43.75%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRR++SS LK+L +   +++P  +            AA+  + S++  +  R ++SDS 
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDSV 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVKYL---------------------------- 113
           +T   KKVEDVMPIATGHE+EELEA LE + L                            
Sbjct: 61  ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRIV 120

[Close]

BLAST of MELO3C012937 vs. TAIR 10
Match: AT3G15640.2 (Rubredoxin-like superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 6.4e-12
Identity = 57/176 (32.39%), Postives = 77/176 (43.75%), Query Frame = 0


Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60
           MWRR++SS LK+L +   +++P  +            AA+  + S++  +  R ++SDS 
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDS- 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEVKYL---------------------------- 113
           +T   KKVEDVMPIATGHE+EELEA LE + L                            
Sbjct: 61  ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRIV 120

The following BLAST results are available for this feature:

BLAST of MELO3C012937 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038130.1	8.6e-43	62.64	cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa] >TYK20477.1 cytochr...	[more]
XP_016900404.1	1.0e-40	57.14	PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5b-2, mitochondrial...	[more]
XP_004151243.1	6.8e-40	59.77	cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus] >KGN58136.1 h...	[more]
XP_038896495.1	7.8e-36	55.75	cytochrome c oxidase subunit 5b-2, mitochondrial-like [Benincasa hispida]	[more]
XP_022956147.1	2.3e-35	55.75	cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita moschata] >XP_0...	[more]

BLAST of MELO3C012937 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSB8	2.1e-12	33.14	Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9LW15	3.7e-12	32.39	Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of MELO3C012937 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T437	4.2e-43	62.64	Cytochrome c oxidase subunit 5b-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4DWP7	5.1e-41	57.14	LOW QUALITY PROTEIN: cytochrome c oxidase subunit 5b-2, mitochondrial OS=Cucumis...	[more]
A0A0A0LDH6	3.3e-40	59.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G538670 PE=4 SV=1	[more]
A0A6J1IV42	1.1e-35	55.75	cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1GVI7	1.1e-35	55.75	cytochrome c oxidase subunit 5b-1, mitochondrial-like OS=Cucurbita moschata OX=3...	[more]

BLAST of MELO3C012937 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80230.1	1.5e-13	33.14	Rubredoxin-like superfamily protein	[more]
AT3G15640.1	2.6e-13	32.39	Rubredoxin-like superfamily protein	[more]
AT3G15640.2	6.4e-12	32.39	Rubredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10122:SF16	SUBFAMILY NOT NAMED	coord: 90..112 coord: 1..93
IPR002124	Cytochrome c oxidase, subunit Vb	PANTHER	PTHR10122	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	coord: 90..112
IPR002124	Cytochrome c oxidase, subunit Vb	PANTHER	PTHR10122	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012937.1	MELO3C012937.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
cellular_component	GO:0005740	mitochondrial envelope
cellular_component	GO:0005751	mitochondrial respiratory chain complex IV