MELO3C012678 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012678
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	major latex allergen Hev b 5-like
Location	chr01: 21177747 .. 21179004 (+)
RNA-Seq Expression	MELO3C012678
Synteny	MELO3C012678

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTACACCTTTGCCCAACCACACCAATTACAATCTCAAAATCTCTTATTTGTCTTCTTTCTCTTCTTCCAAATCTTTCTCTCCTTAACCGGAGGGAAAGAAAACTTAATCGGTTGTTTTTCACACATATAGACCATGGGTGCCTGCGCTACCAAGCCTAAAGTCAAGACCGATGATTTGGCTGCAATCCCTGCACCCGAACCTATTGATCATGATATTGTGAAGAACAATGAGGAAATCAAGGTCGTGGAAGAGGAAAAGAAGGTTGATCAAACTGATGAAAAAAAGAAGGAAGACAATGAGAAAGTTATCGTCGAGAAGGAGAAGTCCCCGTCTCTCGCCTCCTTGCTCGTTGAGGTATACTCTCTAGCTAATTTAATAGATCGAATATTTTAAGGCTTTAATACAAAGTAGGAGATCTTGTTTTAAAAATTGTTTGTGTAATTTATTTATCATGATTAGATATGACCCACAAATTATGGAAGATATTTGTGAGTAAATAAAGAACAAATGTCAAATGCCAACTTGTGATTGAATATTTAGGGGCACTATACAAATATAGTTTGAGATACCATAAATCTAGAATAATCATCTACGAAAATATAATTCCACATGGTAGAACAACGGGGATGTAATATTGTAACATCTGCAATGTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTTCAATTTTGGTATATTTTAATGTCATATTTATCTCGATAATGGATATTTTGATATTCATTTAGACATATTTTGGAGTAATTTTCAGATTATCAAAACCTAAAACATACACTTTGGGTTCTTTTCATGAGTTTTTGAGTTCTTTGATAAGGAAATTATTAAGCATGTTAATAAAAGAGAAAAAATTGCACCTCCTTTTATAGAAGGAAACCGCTCCTCCGGTGGTAGAAGTTTCCTGCATACCGAAGGCCGACGAAAAGCCCAAGGTGGAAGAAGTGGTAGCGCCAACAAATGAAGCAGAAGCGAAGGAAAGCGAAGAGAAACCAAAAGAAAAGAATGAGAAAAGCGTATGACGATTTGAAAGAAGAAAATAACGTACGGCGAAACGTTCTTTATCTGAAATATAATTTTCGCTTCTGACAAGTTATTCATTATTCAATATGTTGTGCAATGATTGGTAATCATTTCTAAGGTGTGGAGGGGCCTATGTTTCCTTTATCAATCAATATTAATGATTTATTTTGTTTTCCCCCTTCTAATTTAATGAAATATTTAAAACTTCTTTTAGTGTTTCA

mRNA sequence

CTTCTACACCTTTGCCCAACCACACCAATTACAATCTCAAAATCTCTTATTTGTCTTCTTTCTCTTCTTCCAAATCTTTCTCTCCTTAACCGGAGGGAAAGAAAACTTAATCGGTTGTTTTTCACACATATAGACCATGGGTGCCTGCGCTACCAAGCCTAAAGTCAAGACCGATGATTTGGCTGCAATCCCTGCACCCGAACCTATTGATCATGATATTGTGAAGAACAATGAGGAAATCAAGGTCGTGGAAGAGGAAAAGAAGGTTGATCAAACTGATGAAAAAAAGAAGGAAGACAATGAGAAAGTTATCGTCGAGAAGGAGAAGTCCCCGTCTCTCGCCTCCTTGCTCGTTGAGAAGGAAACCGCTCCTCCGGTGGTAGAAGTTTCCTGCATACCGAAGGCCGACGAAAAGCCCAAGGTGGAAGAAGTGGTAGCGCCAACAAATGAAGCAGAAGCGAAGGAAAGCGAAGAGAAACCAAAAGAAAAGAATGAGAAAAGCGTATGACGATTTGAAAGAAGAAAATAACGTACGGCGAAACGTTCTTTATCTGAAATATAATTTTCGCTTCTGACAAGTTATTCATTATTCAATATGTTGTGCAATGATTGGTAATCATTTCTAAGGTGTGGAGGGGCCTATGTTTCCTTTATCAATCAATATTAATGATTTATTTTGTTTTCCCCCTTCTAATTTAATGAAATATTTAAAACTTCTTTTAGTGTTTCA

Coding sequence (CDS)

ATGGGTGCCTGCGCTACCAAGCCTAAAGTCAAGACCGATGATTTGGCTGCAATCCCTGCACCCGAACCTATTGATCATGATATTGTGAAGAACAATGAGGAAATCAAGGTCGTGGAAGAGGAAAAGAAGGTTGATCAAACTGATGAAAAAAAGAAGGAAGACAATGAGAAAGTTATCGTCGAGAAGGAGAAGTCCCCGTCTCTCGCCTCCTTGCTCGTTGAGAAGGAAACCGCTCCTCCGGTGGTAGAAGTTTCCTGCATACCGAAGGCCGACGAAAAGCCCAAGGTGGAAGAAGTGGTAGCGCCAACAAATGAAGCAGAAGCGAAGGAAAGCGAAGAGAAACCAAAAGAAAAGAATGAGAAAAGCGTATGA

Protein sequence

MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIVEKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKNEKSV

Homology

[Close]

BLAST of MELO3C012678 vs. NCBI nr
Match: XP_008447176.1 (PREDICTED: major latex allergen Hev b 5-like [Cucumis melo])

HSP 1 Score: 218.4 bits (555), Expect = 3.5e-53
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60
           MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV
Sbjct: 1   MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60

Query: 61  EKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKNE 120
           EKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKNE
Sbjct: 61  EKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKNE 120

Query: 121 KSV 124
           KSV
Sbjct: 121 KSV 123

[Close]

BLAST of MELO3C012678 vs. NCBI nr
Match: XP_004139808.1 (microtubule-associated protein 1B isoform X1 [Cucumis sativus])

HSP 1 Score: 172.9 bits (437), Expect = 1.7e-39
Identity = 101/123 (82.11%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60
           MGACATKPKVK DDLAAIPAPEPIDHDIVKNNEE+K VEEEKK DQTDEKKKE+NEKV+V
Sbjct: 1   MGACATKPKVKADDLAAIPAPEPIDHDIVKNNEEVKFVEEEKKSDQTDEKKKENNEKVVV 60

Query: 61  EKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKNE 120
           +++K PSLASLLVEKE A P VEVS IPKA+EKPK +EV APT EAE K+SEEKPKEK+E
Sbjct: 61  KEKKPPSLASLLVEKEAA-PAVEVSGIPKAEEKPKAKEVAAPTIEAELKKSEEKPKEKDE 120

Query: 121 KSV 124
           KSV
Sbjct: 121 KSV 122

[Close]

BLAST of MELO3C012678 vs. NCBI nr
Match: XP_031745011.1 (microtubule-associated protein 1B isoform X2 [Cucumis sativus] >KAE8646082.1 hypothetical protein Csa_016087 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 3.1e-38
Identity = 99/123 (80.49%), Postives = 110/123 (89.43%), Query Frame = 0


Query: 1   MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60
           MGACATKPKVK DDLAAIPAPEPIDHDIVKNNEE+K VEEEKK DQTDEKKKE+NEKV+V
Sbjct: 1   MGACATKPKVKADDLAAIPAPEPIDHDIVKNNEEVKFVEEEKKSDQTDEKKKENNEKVVV 60

Query: 61  EKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKNE 120
           +++K PSLASLLVE+  A P VEVS IPKA+EKPK +EV APT EAE K+SEEKPKEK+E
Sbjct: 61  KEKKPPSLASLLVEE--AAPAVEVSGIPKAEEKPKAKEVAAPTIEAELKKSEEKPKEKDE 120

Query: 121 KSV 124
           KSV
Sbjct: 121 KSV 121

[Close]

BLAST of MELO3C012678 vs. NCBI nr
Match: XP_038886854.1 (uncharacterized protein LOC120077074 [Benincasa hispida])

HSP 1 Score: 152.1 bits (383), Expect = 3.0e-33
Identity = 93/127 (73.23%), Postives = 105/127 (82.68%), Query Frame = 0


Query: 1   MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60
           MGACATKPKVK DD+  IPAPEP+DHD+VKN EE++VVEEEKK+DQ DEKKKEDNEKV+V
Sbjct: 1   MGACATKPKVKADDMLVIPAPEPVDHDMVKNTEEVQVVEEEKKIDQNDEKKKEDNEKVVV 60

Query: 61  EKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVE---EVVAPTN-EAEAKESEEKPK 120
           ++EK PSLASLLVEKE A PV+EVS    A+EKPK E   E VAPT   AE K+SEEKPK
Sbjct: 61  QEEKPPSLASLLVEKEAA-PVMEVSSETTAEEKPKAEPPKEAVAPTTAAAEEKKSEEKPK 120

Query: 121 EKNEKSV 124
           EK EKSV
Sbjct: 121 EKEEKSV 126

[Close]

BLAST of MELO3C012678 vs. NCBI nr
Match: KAA0041898.1 (major latex allergen Hev b 5-like [Cucumis melo var. makuwa] >TYK17832.1 major latex allergen Hev b 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 134.0 bits (336), Expect = 8.6e-28
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 1  MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60
          MGACATKPKVKTDDLA IPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV
Sbjct: 1  MGACATKPKVKTDDLATIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60

Query: 61 EKEKSPSLASLLVE 75
          EKEKSPSLASLLVE
Sbjct: 61 EKEKSPSLASLLVE 74

[Close]

BLAST of MELO3C012678 vs. ExPASy TrEMBL
Match: A0A1S3BGT9 (major latex allergen Hev b 5-like OS=Cucumis melo OX=3656 GN=LOC103489688 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.7e-53
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60
           MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV
Sbjct: 1   MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60

Query: 61  EKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKNE 120
           EKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKNE
Sbjct: 61  EKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKNE 120

Query: 121 KSV 124
           KSV
Sbjct: 121 KSV 123

[Close]

BLAST of MELO3C012678 vs. ExPASy TrEMBL
Match: A0A0A0K3E6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G230950 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 8.1e-40
Identity = 101/123 (82.11%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60
           MGACATKPKVK DDLAAIPAPEPIDHDIVKNNEE+K VEEEKK DQTDEKKKE+NEKV+V
Sbjct: 1   MGACATKPKVKADDLAAIPAPEPIDHDIVKNNEEVKFVEEEKKSDQTDEKKKENNEKVVV 60

Query: 61  EKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKNE 120
           +++K PSLASLLVEKE A P VEVS IPKA+EKPK +EV APT EAE K+SEEKPKEK+E
Sbjct: 61  KEKKPPSLASLLVEKEAA-PAVEVSGIPKAEEKPKAKEVAAPTIEAELKKSEEKPKEKDE 120

Query: 121 KSV 124
           KSV
Sbjct: 121 KSV 122

[Close]

BLAST of MELO3C012678 vs. ExPASy TrEMBL
Match: A0A5A7TGB5 (Major latex allergen Hev b 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00890 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.1e-28
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0


Query: 1  MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60
          MGACATKPKVKTDDLA IPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV
Sbjct: 1  MGACATKPKVKTDDLATIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEKKKEDNEKVIV 60

Query: 61 EKEKSPSLASLLVE 75
          EKEKSPSLASLLVE
Sbjct: 61 EKEKSPSLASLLVE 74

[Close]

BLAST of MELO3C012678 vs. ExPASy TrEMBL
Match: A0A6J1EUI1 (patellin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437877 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.1e-18
Identity = 72/123 (58.54%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 1   MGACATKPKVKTDDLAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQT-DEKKKEDNEKVI 60
           MGACATKPK K  D A IPAPEP+D D+VKN EE+KVVE+EK+VD   DEKKK+D EKV+
Sbjct: 1   MGACATKPKAKV-DTAVIPAPEPVD-DMVKNTEEVKVVEDEKRVDDVIDEKKKDDTEKVV 60

Query: 61  VEKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEEVVAPTNEAEAKESEEKPKEKN 120
           VE+ K PSL SLLVEKE      EV  + KA+E+P  +E  A     E K+SEEK  +++
Sbjct: 61  VEEAKPPSLDSLLVEKE-----AEVPSVTKAEEQPP-KEAAAVAGAKEVKKSEEKAAKRD 115

Query: 121 EKS 123
           EKS
Sbjct: 121 EKS 115

[Close]

BLAST of MELO3C012678 vs. ExPASy TrEMBL
Match: A0A6J1DY67 (salt stress root protein RS1-like OS=Momordica charantia OX=3673 GN=LOC111024158 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.4e-13
Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 1   MGACATKPKVKTDD---LAAIPAPEPIDHDIVKNNEEIKVVEEEKKVDQTDEK-KKEDNE 60
           MGACATKPKVK D+    A  P PEP    ++K+ EE+KVV+E+KKVD T++K KKED +
Sbjct: 1   MGACATKPKVKEDEPYIPAPEPEPEPTLEIMMKSTEEVKVVQEDKKVDGTNQKIKKEDTK 60

Query: 61  KVIVEKEKSPSLASLLVEKETAPPVVEVSCIPKADEKPKVEE-------VVAPTNEAEAK 120
           K++VE+EK+ SL+SLLVEK+ AP V   S   +   KPKVEE       V A     + K
Sbjct: 61  KIVVEEEKAHSLSSLLVEKKEAPAVEVPSATKEEKLKPKVEEAKAEPPKVAAVPAPEQIK 120

Query: 121 ESEEKPKEKNEKSV 124
           + ++K   K+EKSV
Sbjct: 121 KCDDKATGKDEKSV 134

The following BLAST results are available for this feature:

BLAST of MELO3C012678 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447176.1	3.5e-53	100.00	PREDICTED: major latex allergen Hev b 5-like [Cucumis melo]	[more]
XP_004139808.1	1.7e-39	82.11	microtubule-associated protein 1B isoform X1 [Cucumis sativus]	[more]
XP_031745011.1	3.1e-38	80.49	microtubule-associated protein 1B isoform X2 [Cucumis sativus] >KAE8646082.1 hyp...	[more]
XP_038886854.1	3.0e-33	73.23	uncharacterized protein LOC120077074 [Benincasa hispida]	[more]
KAA0041898.1	8.6e-28	98.65	major latex allergen Hev b 5-like [Cucumis melo var. makuwa] >TYK17832.1 major l...	[more]

BLAST of MELO3C012678 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C012678 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGT9	1.7e-53	100.00	major latex allergen Hev b 5-like OS=Cucumis melo OX=3656 GN=LOC103489688 PE=4 S...	[more]
A0A0A0K3E6	8.1e-40	82.11	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G230950 PE=4 SV=1	[more]
A0A5A7TGB5	4.1e-28	98.65	Major latex allergen Hev b 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1EUI1	5.1e-18	58.54	patellin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437877 PE=4 SV=1	[more]
A0A6J1DY67	6.4e-13	49.25	salt stress root protein RS1-like OS=Momordica charantia OX=3673 GN=LOC111024158...	[more]

BLAST of MELO3C012678 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012678.1	MELO3C012678.1	mRNA