MELO3C012642 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012642
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	glucan endo-1,3-beta-glucosidase 3-like
Location	chr01: 20641580 .. 20644471 (+)
RNA-Seq Expression	MELO3C012642
Synteny	MELO3C012642

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGCTCGCACCACCCTACGCCCTATGTCTACTTTCTCTCTCTCCACCCAAATAAAAAAGGAGCACTTGTACTTTCGAAATGGATATTTTACAGGACAAGAAGTGTAAAGTCTTCAACTTTTCGACAAGGTAATGATGCCACTCCACAATATTTTCTCCAATTCTCTATATTTAAACCAGAAAGAAAGCAGGCATCTATGGTAACTAAGTAACTATCATCTAAAAGTGGGAGGATGAGGAACAGCCTGCTCATTAGAGGAAGAACAGGAGGATTGGCCCATGAATGGGTTATACAGAGCTTAATATTCCTCGTTCTTGGTCATTTTCTCTATCCAGGTGACTGATTGTTCGTTTCTTCTGTAAATTTGGAGTTTATATGATGATCAAACGACTATCTAGATATTTCAATTACAGGCATTTAGTGCATTCCAATTGATTTTCTTTCCTTTATACAGATAAAGCATGTACCTTCTCTTCTCTCATCAAGTATCCTCTACGCAACCTTAATAGCCCATTAATTGTATTTTTGTTCTCTGCCATATTATTCAAACTTGACATTTTTTTAATGGCCATATTTATTGTTTAATTTTCATCTGTCTTTTTTTTTCCAGAACTGAACAAATTGAATATTTTGTTTCTTGTCTTTCTTCCCATTTGGTCTCCCGGGAATAACTGTTCTGAATTGAAGATTGTGAATTTTAAATTGCTTTTAAATTTGAGTTGCTTGAAATTTGGGATCTAATGTGGCAAGTTAATTATTTTCATCTTGTTGATTCATAATTTAGGACAAAGAGAATTTAGAGTAAACATTCTATTATTGTAAACTTCACTCATGCTGGCCTGGAATCTTTCTATGATATGCTCAAACAAGCGTCTACAGGGGCTCCCTAGATTTTTACAGGCTAATATGAACTTCAACAACTTTTACTTCACTGCACTCTTTGCCTACTGATGATGAATTTTAACTGAGCTTTCTTGTATTTTCATCAAGATTTATGTTGTTTTGTTCAATGAGCAATTCTGGCTCAAGAGGATGAATTTATTTTTATTTCTAAAATAACAATGTGGGGGGAAAAATATAGTTTAAATTTTGTTTCTGGGATCCAAAATGACAGGACACGCGAGAGAGCTAAGCCACGAAAATCAGAAATTTAGTTCCCGGCCAGTTTTCACCTCTCAAAGGGATATCACCACCCCTATAACAACCGTTCCCACAATAATTCTTTCCAACCCCACTGCCTCGACTCCATTTATCAATCCAACTTCAACTTCAGACACGTATTCTCCGGCCATGGAGTCTCCCAAAAGATCATCTCCACCGTCGTCAGGGGCTAGTTGGTGCATTGCTAGTCAAAGTGCATCACAAAAGGCATTACAAATTGCTCTAGACTACGCATGTGGCTATGGTGGTACTGATTGTTCAGCAATTCAAGCTGGTCAGAGGTGTTACAACCCAAACACCATTCATGATCATGCCTCCTACGCCTTCAATAGCTACTATCAAAAGAATCCTGTTCCAAACAGCTGTAACTTTGGTGGGACTGCTGTCATCACTAGCACTGATCCAAGTATGTTGCTTCCTTCAAAAGTTGTTTCTTTGTTGCCTCACTTGATAATAATGTGTTCTTTTTCTATTCTCTCTCCTTTCTTTTTTTCTTTTTGGGGGTGAGGTAAGAGAAAGCGGAGAAGATCAGGCTAACTTATTATAATCTGGTAACAAGTCCAAAGAATCAAAGAATTTCAAATTGTTGCAATGCTAACTGAGAGTTTCTTCTGAAGGTCCAGAAGCTTTGCAAATATTAAAAAAAGCAGCCGTCGTGAACAAACTCTATTTGCCCTCTCTCACCTTCTTTAAACCTTCTACGAGAAATGTGGATATAAAGACAATTAATCCTTTCTTACTTTGAAGTTAATGATCAAAACCCCAAATCTAATAGTCAGAGGAAATTCAGCCCCCACAACGCACACTTTTTCCCCTTTTCCAAGTTGGGTTAGTGAAGGGAAGAAGGTTGGGTGTGTCTGTAGGGACTATAAAGTGATGTGAATTATTGAAGCTATAATGGGCTGTAGTGGAATTCTTCTTTCTGCAACTGCAAAATGTTTGACATAAAACTTCATAGATTGACTCTCTCTTTCTATAAAGTCTTGTTTATGTCTTTTCTCACCACTTTTTTTTTCAGGTACTATGGCATGTCAGTACACATCCACTAGGTACAAACCCCATCTTCCATTGCTAACATTTGCCTTCTTTCCTTTCCTGCTACCAACATTCATTTCCTAACAATGACACTGCCATTTTTCAACTCTTCAGCACAAGTTCATCAGTTCTAAACACCACAAATTCCAAGGGATCAACCGTGTTTGGTGCTGTACCCTCAAGTCCCTCTCCTTCAGCAGCAACCTGTCAAGAAATAAAAGTTCTTCAACAACTATTGTCGTTGACAATTGTTTCTCTAACATTATTACACACCAACTATCTTCATGGCTGATTGGGACTGTAAAACCAACTTAATTTCTTATAAAACTTTGCATTTACTTCACCCAATTGAAGTTGCTTGAAAGAACTGCAGAGTTCGGATTCAGGAACAGACATTTCTGGGACATGGTTTTCAGCCTCCTTGAAAAGTAAAGCTAATTTAGTAAAGAGCAAAGTGAAGACTTTTCAATGTTGTGTTGGATCGAGAGCACATGCACATGTCTTGTTGTTCATTGGGGAAAAGAAGTAGTAACAATACATGAACCTAATCTTGTTGTTTGTATTGTACATTTTGTACCTTTCCTCTTGAATTCCTCTGTGTGCTTTTTCCTTTGATAATATAGTGTTTTACTTTTAATTGCCAAATGAATAATGGGATTATCCAATTTTTAAGTATTATATTATAATAAATGAT

mRNA sequence

ATTTGCTCGCACCACCCTACGCCCTATGTCTACTTTCTCTCTCTCCACCCAAATAAAAAAGGAGCACTTGTACTTTCGAAATGGATATTTTACAGGACAAGAAGTGTAAAGTCTTCAACTTTTCGACAAGGTAATGATGCCACTCCACAATATTTTCTCCAATTCTCTATATTTAAACCAGAAAGAAAGCAGGCATCTATGGTAACTAAGTAACTATCATCTAAAAGTGGGAGGATGAGGAACAGCCTGCTCATTAGAGGAAGAACAGGAGGATTGGCCCATGAATGGGTTATACAGAGCTTAATATTCCTCGTTCTTGGTCATTTTCTCTATCCAGGACACGCGAGAGAGCTAAGCCACGAAAATCAGAAATTTAGTTCCCGGCCAGTTTTCACCTCTCAAAGGGATATCACCACCCCTATAACAACCGTTCCCACAATAATTCTTTCCAACCCCACTGCCTCGACTCCATTTATCAATCCAACTTCAACTTCAGACACGTATTCTCCGGCCATGGAGTCTCCCAAAAGATCATCTCCACCGTCGTCAGGGGCTAGTTGGTGCATTGCTAGTCAAAGTGCATCACAAAAGGCATTACAAATTGCTCTAGACTACGCATGTGGCTATGGTGGTACTGATTGTTCAGCAATTCAAGCTGGTCAGAGGTGTTACAACCCAAACACCATTCATGATCATGCCTCCTACGCCTTCAATAGCTACTATCAAAAGAATCCTGTTCCAAACAGCTGTAACTTTGGTGGGACTGCTGTCATCACTAGCACTGATCCAAGTACTATGGCATGTCAGTACACATCCACTAGGTACAAACCCCATCTTCCATTGCTAACATTTGCCTTCTTTCCTTTCCTGCTACCAACATTCATTTCCTAACAATGACACTGCCATTTTTCAACTCTTCAGCACAAGTTCATCAGTTCTAAACACCACAAATTCCAAGGGATCAACCGTGTTTGGTGCTGTACCCTCAAGTCCCTCTCCTTCAGCAGCAACCTGTCAAGAAATAAAAGTTCTTCAACAACTATTGTCGTTGACAATTGTTTCTCTAACATTATTACACACCAACTATCTTCATGGCTGATTGGGACTGTAAAACCAACTTAATTTCTTATAAAACTTTGCATTTACTTCACCCAATTGAAGTTGCTTGAAAGAACTGCAGAGTTCGGATTCAGGAACAGACATTTCTGGGACATGGTTTTCAGCCTCCTTGAAAAGTAAAGCTAATTTAGTAAAGAGCAAAGTGAAGACTTTTCAATGTTGTGTTGGATCGAGAGCACATGCACATGTCTTGTTGTTCATTGGGGAAAAGAAGTAGTAACAATACATGAACCTAATCTTGTTGTTTGTATTGTACATTTTGTACCTTTCCTCTTGAATTCCTCTGTGTGCTTTTTCCTTTGATAATATAGTGTTTTACTTTTAATTGCCAAATGAATAATGGGATTATCCAATTTTTAAGTATTATATTATAATAAATGAT

Coding sequence (CDS)

ATGAGGAACAGCCTGCTCATTAGAGGAAGAACAGGAGGATTGGCCCATGAATGGGTTATACAGAGCTTAATATTCCTCGTTCTTGGTCATTTTCTCTATCCAGGACACGCGAGAGAGCTAAGCCACGAAAATCAGAAATTTAGTTCCCGGCCAGTTTTCACCTCTCAAAGGGATATCACCACCCCTATAACAACCGTTCCCACAATAATTCTTTCCAACCCCACTGCCTCGACTCCATTTATCAATCCAACTTCAACTTCAGACACGTATTCTCCGGCCATGGAGTCTCCCAAAAGATCATCTCCACCGTCGTCAGGGGCTAGTTGGTGCATTGCTAGTCAAAGTGCATCACAAAAGGCATTACAAATTGCTCTAGACTACGCATGTGGCTATGGTGGTACTGATTGTTCAGCAATTCAAGCTGGTCAGAGGTGTTACAACCCAAACACCATTCATGATCATGCCTCCTACGCCTTCAATAGCTACTATCAAAAGAATCCTGTTCCAAACAGCTGTAACTTTGGTGGGACTGCTGTCATCACTAGCACTGATCCAAGTACTATGGCATGTCAGTACACATCCACTAGGTACAAACCCCATCTTCCATTGCTAACATTTGCCTTCTTTCCTTTCCTGCTACCAACATTCATTTCCTAA

Protein sequence

MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTSTRYKPHLPLLTFAFFPFLLPTFIS

Homology

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BLAST of MELO3C012642 vs. NCBI nr
Match: XP_016900361.1 (PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo] >XP_016900362.1 PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo] >XP_016900363.1 PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo])

HSP 1 Score: 391.3 bits (1004), Expect = 5.3e-105
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDIT 60
           MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDIT
Sbjct: 20  MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDIT 79

Query: 61  TPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKA 120
           TPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKA
Sbjct: 80  TPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKA 139

Query: 121 LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 180
           LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI
Sbjct: 140 LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 199

Query: 181 TSTDPSTMACQYTST 196
           TSTDPSTMACQYTST
Sbjct: 200 TSTDPSTMACQYTST 214

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BLAST of MELO3C012642 vs. NCBI nr
Match: XP_031744909.1 (glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis sativus] >KAE8646097.1 hypothetical protein Csa_016385 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 4.6e-101
Identity = 187/195 (95.90%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 1   MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDIT 60
           MRNSLLIRGRTGGL HEWVIQSLIFL+LGHFLY GH REL+HENQKFSSRPVF SQRDIT
Sbjct: 96  MRNSLLIRGRTGGLTHEWVIQSLIFLILGHFLYSGHTRELNHENQKFSSRPVFISQRDIT 155

Query: 61  TPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKA 120
           TPITTVPTIILSNPT STPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQK 
Sbjct: 156 TPITTVPTIILSNPTVSTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKV 215

Query: 121 LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 180
           LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI
Sbjct: 216 LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 275

Query: 181 TSTDPSTMACQYTST 196
           TSTDPSTMACQYTST
Sbjct: 276 TSTDPSTMACQYTST 290

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BLAST of MELO3C012642 vs. NCBI nr
Match: XP_038887351.1 (glucan endo-1,3-beta-glucosidase 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 364.0 bits (933), Expect = 9.0e-97
Identity = 181/195 (92.82%), Postives = 187/195 (95.90%), Query Frame = 0


Query: 1   MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDIT 60
           MRNSLLIRGRTGGL HEW+I SLIFL+LGHFL+PGH REL+HENQKFSS PV T+QRDIT
Sbjct: 19  MRNSLLIRGRTGGLTHEWIIHSLIFLILGHFLHPGHTRELNHENQKFSS-PVSTTQRDIT 78

Query: 61  TPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKA 120
           TPITTVPTIILSNPTASTPFINPTST+DTYSP M SPKRSSPPSSGASWCIASQSASQKA
Sbjct: 79  TPITTVPTIILSNPTASTPFINPTSTADTYSPVMGSPKRSSPPSSGASWCIASQSASQKA 138

Query: 121 LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 180
           LQIALDYACGYGGTDCSAIQAGQ CYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI
Sbjct: 139 LQIALDYACGYGGTDCSAIQAGQSCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 198

Query: 181 TSTDPSTMACQYTST 196
           TSTDPSTMACQYTST
Sbjct: 199 TSTDPSTMACQYTST 212

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BLAST of MELO3C012642 vs. NCBI nr
Match: XP_023554113.1 (glucan endo-1,3-beta-glucosidase 12-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.7 bits (896), Expect = 1.8e-92
Identity = 174/195 (89.23%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 1   MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDIT 60
           MRNS +IRGRTGGL  EW+IQSLIFL+L HFL PGH REL+HENQKFSS PV T+QRDIT
Sbjct: 1   MRNSPIIRGRTGGLTQEWLIQSLIFLILAHFLCPGHTRELNHENQKFSS-PVSTTQRDIT 60

Query: 61  TPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKA 120
           TPITTVPTIILSNPTASTPF+NPTSTSDTYSP MESPKRSSPP SGASWCIASQSASQ A
Sbjct: 61  TPITTVPTIILSNPTASTPFLNPTSTSDTYSPTMESPKRSSPPLSGASWCIASQSASQTA 120

Query: 121 LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 180
           LQ+ALDYACG+GGTDCSAIQ GQRCYNPNTIH+HASYAFNSYYQKNPVPNSCNFGGTAVI
Sbjct: 121 LQVALDYACGHGGTDCSAIQTGQRCYNPNTIHNHASYAFNSYYQKNPVPNSCNFGGTAVI 180

Query: 181 TSTDPSTMACQYTST 196
           TSTDPSTMACQYTST
Sbjct: 181 TSTDPSTMACQYTST 194

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BLAST of MELO3C012642 vs. NCBI nr
Match: KAG6572453.1 (Glucan endo-1,3-beta-glucosidase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 342.4 bits (877), Expect = 2.8e-90
Identity = 173/195 (88.72%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDIT 60
           MRNS +IRGRT GL  EW+IQSLIFL+L HFL PGH REL+HENQKFSS PV T+QRDIT
Sbjct: 1   MRNSPIIRGRT-GLTQEWLIQSLIFLILAHFLCPGHTRELNHENQKFSS-PVSTTQRDIT 60

Query: 61  TPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKA 120
           TPITTVPTIILSNPTASTPF+NPTSTSDTYSP MESPKRSSPP SGASWCIASQSASQ A
Sbjct: 61  TPITTVPTIILSNPTASTPFLNPTSTSDTYSPTMESPKRSSPPLSGASWCIASQSASQTA 120

Query: 121 LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 180
           LQ+ALDYACG+GGTDCSAIQ GQRCYNPNTIH+HASYAFNSYYQKNPVPNSCNFGGTAVI
Sbjct: 121 LQVALDYACGHGGTDCSAIQTGQRCYNPNTIHNHASYAFNSYYQKNPVPNSCNFGGTAVI 180

Query: 181 TSTDPSTMACQYTST 196
           TSTDPSTMACQYTST
Sbjct: 181 TSTDPSTMACQYTST 193

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BLAST of MELO3C012642 vs. ExPASy Swiss-Prot
Match: Q9FJU9 (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-17
Identity = 48/96 (50.00%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 100 SSPPSSGA--SWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASY 159
           S   SSG+  SWCIAS  AS++ L+ ALD+ACG G  DC+AIQ  Q C+ P+T+  HAS+
Sbjct: 358 SGTNSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASF 417

Query: 160 AFNSYYQKNPVPN-SCNFGGTAVITSTDPSTMACQY 193
            FNSY+Q+N   + +C+FGG  V  + DPS   C Y
Sbjct: 418 VFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIY 453

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BLAST of MELO3C012642 vs. ExPASy Swiss-Prot
Match: Q9ZU91 (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 5.6e-17
Identity = 41/90 (45.56%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 104 SSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYY 163
           ++  ++CIA +   +K LQ ALD+ACG G  DCSA+  G+ CY P+ +  H++YAFN+YY
Sbjct: 355 TTNQTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYY 414

Query: 164 QK-NPVPNSCNFGGTAVITSTDPSTMACQY 193
           QK      SC+F G A +T+TDPS   C +
Sbjct: 415 QKMGKASGSCDFKGVATVTTTDPSRGTCVF 444

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BLAST of MELO3C012642 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 89.0 bits (219), Expect = 7.3e-17
Identity = 55/148 (37.16%), Postives = 73/148 (49.32%), Query Frame = 0


Query: 81  INPTSTSDTYSPAMESPKRSSPPSSGASW------------------------------- 140
           ++P  TS  Y   + +    +PP S ASW                               
Sbjct: 322 LHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVYLLHVSGSGTFLANDTTNQTY 381

Query: 141 CIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQK-NPV 197
           CIA      K LQ ALD+ACG G ++CS IQ G+ CY PN +  HAS+AFNSYYQK    
Sbjct: 382 CIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRA 441

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BLAST of MELO3C012642 vs. ExPASy Swiss-Prot
Match: Q9C7U5 (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 7.3e-17
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 104 SSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYY 163
           ++  ++C A + A  K LQ ALD+ACG G  DCS I+ G+ CY P+ +  HA+YAF++YY
Sbjct: 363 TTNQTYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYY 422

Query: 164 -QKNPVPNSCNFGGTAVITSTDPSTMACQYTSTR 197
            Q    P++CNF G A IT+TDPS   C +  +R
Sbjct: 423 HQTGNNPDACNFNGVASITTTDPSHGTCVFAGSR 456

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BLAST of MELO3C012642 vs. ExPASy Swiss-Prot
Match: Q84V39 (Major pollen allergen Ole e 10 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-16
Identity = 50/121 (41.32%), Postives = 60/121 (49.59%), Query Frame = 0


Query: 75  TASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGT 134
           TA  P   P  T     P   SP    P      WC+    A+   LQ  +DY C   G 
Sbjct: 4   TAGVP-DQPVPTPTPSVPTSSSPVPKPPTQGNKKWCVPKAEATDAQLQSNIDYVCSQSGM 63

Query: 135 DCSAIQAGQRCYNPNTIHDHASYAFNSYYQ-KNPVPNSCNFGGTAVITSTDPSTMACQYT 194
           DC  IQA   C+NPNT+  HASYA NS+YQ K      C+F GT  ITS+DPS  +C + 
Sbjct: 64  DCGPIQANGACFNPNTVRAHASYAMNSWYQSKGRNDFDCDFSGTGAITSSDPSNGSCSFL 123

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BLAST of MELO3C012642 vs. ExPASy TrEMBL
Match: A0A1S4DWJ2 (glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo OX=3656 GN=LOC103489662 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.6e-105
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDIT 60
           MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDIT
Sbjct: 20  MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDIT 79

Query: 61  TPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKA 120
           TPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKA
Sbjct: 80  TPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKA 139

Query: 121 LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 180
           LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI
Sbjct: 140 LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 199

Query: 181 TSTDPSTMACQYTST 196
           TSTDPSTMACQYTST
Sbjct: 200 TSTDPSTMACQYTST 214

[Close]

BLAST of MELO3C012642 vs. ExPASy TrEMBL
Match: A0A0A0K8Y4 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235750 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.8e-101
Identity = 186/195 (95.38%), Postives = 190/195 (97.44%), Query Frame = 0


Query: 1   MRNSLLIRGRTGGLAHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDIT 60
           MRNSLLIRGRTGGL HEWVIQSLIFL+LGHFLY GH REL+HENQKFSSRPVFTSQRDIT
Sbjct: 1   MRNSLLIRGRTGGLTHEWVIQSLIFLILGHFLYSGHTRELNHENQKFSSRPVFTSQRDIT 60

Query: 61  TPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQKA 120
           TPITTVPTIILSNPT STPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQ+AS+K 
Sbjct: 61  TPITTVPTIILSNPTPSTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQNASRKV 120

Query: 121 LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 180
           LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI
Sbjct: 121 LQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAVI 180

Query: 181 TSTDPSTMACQYTST 196
           TSTDPSTMACQYTST
Sbjct: 181 TSTDPSTMACQYTST 195

[Close]

BLAST of MELO3C012642 vs. ExPASy TrEMBL
Match: A0A6J1D2V3 (glucan endo-1,3-beta-glucosidase 12-like OS=Momordica charantia OX=3673 GN=LOC111016792 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 2.0e-89
Identity = 169/196 (86.22%), Postives = 179/196 (91.33%), Query Frame = 0


Query: 1   MRNSLLIRGRTGGL-AHEWVIQSLIFLVLGHFLYPGHARELSHENQKFSSRPVFTSQRDI 60
           MRN  LIRGRTGGL  HEWVI SLIFL+LGHFLYPGH REL+HE +KF+S PV T+QRDI
Sbjct: 36  MRNRPLIRGRTGGLGTHEWVIYSLIFLILGHFLYPGHTRELNHEKKKFNS-PVSTTQRDI 95

Query: 61  TTPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGASWCIASQSASQK 120
           TTPITTVPTIILSNPTASTP INPTSTSD+YSPAME+PK+SSPPSSG SWCIASQS SQ 
Sbjct: 96  TTPITTVPTIILSNPTASTPLINPTSTSDSYSPAMETPKKSSPPSSGGSWCIASQSVSQT 155

Query: 121 ALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAV 180
           ALQ+A+DYACGYGG DCSAIQ GQ CYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAV
Sbjct: 156 ALQVAIDYACGYGGADCSAIQPGQSCYNPNTIHDHASYAFNSYYQKNPVPNSCNFGGTAV 215

Query: 181 ITSTDPSTMACQYTST 196
           ITSTDPSTMACQY ST
Sbjct: 216 ITSTDPSTMACQYAST 230

[Close]

BLAST of MELO3C012642 vs. ExPASy TrEMBL
Match: A0A5A7SSE1 (Glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00020 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.5e-84
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 35  GHARELSHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAM 94
           GHARELSHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAM
Sbjct: 3   GHARELSHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAM 62

Query: 95  ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDH 154
           ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDH
Sbjct: 63  ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDH 122

Query: 155 ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTST 196
           ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTST
Sbjct: 123 ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTST 163

[Close]

BLAST of MELO3C012642 vs. ExPASy TrEMBL
Match: A0A0A0K3M5 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G251640 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.3e-80
Identity = 151/161 (93.79%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 35  GHARELSHENQKFSSRPVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAM 94
           GH REL+HENQKFSSRPVF SQRDITTPITTVPTIILSNPT STPFINPTSTSDTYSPAM
Sbjct: 3   GHTRELNHENQKFSSRPVFISQRDITTPITTVPTIILSNPTPSTPFINPTSTSDTYSPAM 62

Query: 95  ESPKRSSPPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDH 154
           ESPKRSSPPSSG SWCIASQ+AS+K LQIALDY CGYGGTDCSAIQAGQRCYNPNTIHDH
Sbjct: 63  ESPKRSSPPSSGTSWCIASQNASRKVLQIALDYTCGYGGTDCSAIQAGQRCYNPNTIHDH 122

Query: 155 ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACQYTST 196
           ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMAC+YTST
Sbjct: 123 ASYAFNSYYQKNPVPNSCNFGGTAVITSTDPSTMACEYTST 163

[Close]

BLAST of MELO3C012642 vs. TAIR 10
Match: AT2G30933.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.2e-31
Identity = 72/145 (49.66%), Postives = 91/145 (62.76%), Query Frame = 0


Query: 56  QRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGA-----SWC 115
           ++DITTP+ T       NPT +   + P S SD  + A       S P   A     SWC
Sbjct: 31  EKDITTPLAT-------NPTTTPTTVVPNSDSDASAVATTPLTIPSSPHGVAYPGDQSWC 90

Query: 116 IASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPN 175
           +A ++ ++ ALQ ALDYACG GG DCS IQ G  CYNPN++  HAS+AFNSYYQKNP+P+
Sbjct: 91  VARENVAKMALQAALDYACGIGGADCSEIQEGGNCYNPNSLRAHASFAFNSYYQKNPIPS 150

Query: 176 SCNFGGTAVITSTDPSTMACQYTST 196
           SCNF GTA+  S DPS  +C + ST
Sbjct: 151 SCNFDGTAITISADPSLGSCHFPST 168

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BLAST of MELO3C012642 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 128.6 bits (322), Expect = 5.9e-30
Identity = 57/87 (65.52%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 109 WCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPV 168
           WCIA  +AS  +LQ+ALDYACGYGG DC  IQ G  CY PNTI DHAS+AFNSYYQK+P 
Sbjct: 148 WCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQKHPG 207

Query: 169 PNSCNFGGTAVITSTDPSTMACQYTST 196
            +SCNFGG A +TSTDPS  +C ++S+
Sbjct: 208 SDSCNFGGAAQLTSTDPSKGSCHFSSS 234

[Close]

BLAST of MELO3C012642 vs. TAIR 10
Match: AT2G30933.2 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-29
Identity = 69/136 (50.74%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 56  QRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPSSGA-----SWC 115
           ++DITTP+ T       NPT +   + P S SD  + A       S P   A     SWC
Sbjct: 31  EKDITTPLAT-------NPTTTPTTVVPNSDSDASAVATTPLTIPSSPHGVAYPGDQSWC 90

Query: 116 IASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVPN 175
           +A ++ ++ ALQ ALDYACG GG DCS IQ G  CYNPN++  HAS+AFNSYYQKNP+P+
Sbjct: 91  VARENVAKMALQAALDYACGIGGADCSEIQEGGNCYNPNSLRAHASFAFNSYYQKNPIPS 150

Query: 176 SCNFGGTAVITSTDPS 187
           SCNF GTA+  S DPS
Sbjct: 151 SCNFDGTAITISADPS 159

[Close]

BLAST of MELO3C012642 vs. TAIR 10
Match: AT1G09460.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-26
Identity = 69/143 (48.25%), Postives = 86/143 (60.14%), Query Frame = 0


Query: 51  PVFTSQRDITTPITTVPTIILSNPTASTPFINPTSTSDTYSPAMESPKRSSPPS-SGASW 110
           PV T      TP  T P   ++NP    P   P+ T     P +  P  S+ PS SG SW
Sbjct: 81  PVITIPPPTLTPPVTNP---VTNPVTQYPPTQPSGTVPVPVPVVAPPVVSNSPSVSGQSW 140

Query: 111 CIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNSYYQKNPVP 170
           C+A   ASQ +LQ ALDYACG    DCS +Q G  CY+P ++  HAS+AFNSYYQKNP P
Sbjct: 141 CVAKPGASQVSLQQALDYACGI--ADCSQLQQGGNCYSPISLQSHASFAFNSYYQKNPSP 200

Query: 171 NSCNFGGTAVITSTDPSTMACQY 193
            SC+FGG A + +T+PST +C Y
Sbjct: 201 QSCDFGGAASLVNTNPSTGSCIY 218

[Close]

BLAST of MELO3C012642 vs. TAIR 10
Match: AT5G55180.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20
Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 102 PPSSGASWCIASQSASQKALQIALDYACGYGGTDCSAIQAGQRCYNPNTIHDHASYAFNS 161
           P   G +WC+A+   +++ LQ  LDYACG GG DC  IQ G  CYNP ++  HASYAFNS
Sbjct: 365 PSLVGQTWCVANGKTTKEKLQEGLDYACGEGGADCRPIQPGATCYNPESLEAHASYAFNS 424

Query: 162 YYQKNP-VPNSCNFGGTAVITSTDPSTMACQY 193
           YYQKN     +CNFGG A + S  P    C++
Sbjct: 425 YYQKNARGVGTCNFGGAAYVVSQPPKYGKCEF 456

The following BLAST results are available for this feature:

BLAST of MELO3C012642 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900361.1	5.3e-105	100.00	PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cucumis melo] >XP_016900362....	[more]
XP_031744909.1	4.6e-101	95.90	glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis sativus] >KAE8646097.1 h...	[more]
XP_038887351.1	9.0e-97	92.82	glucan endo-1,3-beta-glucosidase 3-like isoform X1 [Benincasa hispida]	[more]
XP_023554113.1	1.8e-92	89.23	glucan endo-1,3-beta-glucosidase 12-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6572453.1	2.8e-90	88.72	Glucan endo-1,3-beta-glucosidase 1, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of MELO3C012642 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJU9	1.9e-17	50.00	Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana OX=3702 GN=At5g56590...	[more]
Q9ZU91	5.6e-17	45.56	Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 ...	[more]
O65399	7.3e-17	37.16	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 ...	[more]
Q9C7U5	7.3e-17	45.74	Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 ...	[more]
Q84V39	1.3e-16	41.32	Major pollen allergen Ole e 10 OS=Olea europaea OX=4146 PE=1 SV=1	[more]

BLAST of MELO3C012642 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DWJ2	2.6e-105	100.00	glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo OX=3656 GN=LOC103489662 ...	[more]
A0A0A0K8Y4	3.8e-101	95.38	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235750 PE=4 SV=...	[more]
A0A6J1D2V3	2.0e-89	86.22	glucan endo-1,3-beta-glucosidase 12-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5A7SSE1	1.5e-84	100.00	Glucan endo-1,3-beta-glucosidase 3-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0K3M5	6.3e-80	93.79	X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G251640 PE=4 SV=...	[more]

BLAST of MELO3C012642 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30933.1	3.2e-31	49.66	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G29380.1	5.9e-30	65.52	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G30933.2	2.3e-29	50.74	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G09460.1	1.0e-26	48.25	Carbohydrate-binding X8 domain superfamily protein	[more]
AT5G55180.1	1.5e-20	50.00	O-Glycosyl hydrolases family 17 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 108..192 e-value: 1.3E-43 score: 160.9
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 109..178 e-value: 1.2E-20 score: 73.9
None	No IPR available	GENE3D	1.20.58.1040		coord: 104..200 e-value: 5.3E-11 score: 44.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..102
None	No IPR available	PANTHER	PTHR32227:SF338	BETA 1,3-GLUCANASE-LIKE	coord: 35..205
IPR044965	Glycoside hydrolase family 17, plant	PANTHER	PTHR32227	GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED	coord: 35..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012642.1	MELO3C012642.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds