MELO3C012627 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012627
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	KRR1 small subunit processome component
Location	chr01: 20406217 .. 20410733 (-)
RNA-Seq Expression	MELO3C012627
Synteny	MELO3C012627

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGAATGAAAAGAAGAAAGAAGGAAATTAAAAAAGTATAAAAAAAATAAAAAAATCAGTATTATTTTTCCCTAATTTTGTTTTTCCGAAAAATTTTAGATTTAGGGTTCAGTTCTTCACCTTCACGCCTCACCTCTGTCTCTCATCTCTGGGCTCTCCCTCTCATCTTCGACACGCCGGCCTTAGTGCCTCACACTCAGTCTTCGAAGTCCGACTCTCCCTTGTCGTTGGAGAAGTTTAAGCTTAGTTACTGACTATTTATTTGGATTTGAGGTATTTTCTTCATTGAAAATTTTTCGTGTCTTTTGAGTTTGAAAATTTAGTATATTTGGTTTAATAATTGTTGGAAGTTGGATAAATGTAGTTTTCTTTTGGTGTATGTAGTATGTATTAGGGGATTTAGATTGTTGGTGCCTAGGGATGAATGAGAAAATAAACAACCCAACCCAACCCATATTAATTGTGCAAGGATTTCCAGATTTTTCATCTAGGTTTAGCTCCTTTCCCATTGCTTCTCACGTTGGTTTTCCCATTGCTTCTAATGTTGGTTTTCCCATTGCTCTTTTCCAGTTATGGAGGACATAGAGCAACAGCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAATTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGGTAAGCAGTTTTATGTTTTACGTTTTAAAATTTTATTCAACTTCGATTTTGTTTCGACTATTCTGTTTCCATCTTTAATTGTTCTAGGCCAATATGTTTTAGTTCCTGTTTTTTCTATCATTTTTATGTGTAGATGGAGGAAGGTAGAAGTTTTTCTTTCAAGTGCTGCGACCTTTTTAATTTTAGGCTATGTTTTCCAGAAAATTATTAGTGGCAGTAGAATAGCAACAAGGTTTTGATTTATAACTTTATGAATTTTGGTAATCTTTATCGGTGGAAAACGTTCAGCACACTTCCTATTCTTTCCTTTTTTTTCAATATGCTTGTTTTTTCCTTAAACTTAAAATATATTTCTGCTATACAATTGGATTAATCAGATTCCAATTCTTAGAGGTTTCAATTTTTCCATTTTCAGAAAAATATTTGCGAGACACATGGCCAGTTGTGAAGTCTGCATTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGGTAAGAGTCCATAAACTCCTAATACAAAAATAAAAAGGTTTATAACCTAATGAAGGAATGGCTTCGGTTCTGTTTTTTGAGATATTTTGAAACCAGTTGTAATTCTCACTTCATGTGTTTTGATCTCCCACGTTTGGTCAGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGTTAAACAATGATTTGATTTATTTTATGTTATTTGTTCTGACATGGTAGTTTGAGTCTTTCTTTCACCAATCATGTTAATTGGTATCTTGAATTGTGTTTTCTAACCATGTCTTTTGTGTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTACGCAAGAAGGTCAGTATCTTGATTTTATATTCTTTTTCTCTCGAGGCATTTGACTAAGAACTTTTCCATAGTTGATAGTTGTAATTGTTTATTCTTGAACATGCTCCAATGTCTGAATTTCATCCTATATTCAAGAACTCTATATCTATGGCAACCTACAGAGTTAGCCCTTAATCTCCTTGCATATGCTATAAGCTTAATTCTGAAGTTCTTCCTAAATTCAAGCAGTCTACATGGCTTACTATTACTACAAATTGGGAACATTTGGACATAAATTGAAATGTAGACTTTTATTCTGAATTTGAAAACTAGCCTGTGCTAGGCCACCAATCACCAAAATGTATAAAAGGAGGGGTAAGAAGGGAATTTCGGCCTAGAAAATATGGTTGTTAGGTTGCTTAGTGGTCCTAACACCACGTGGCAGCAGGAGAGGAATATATATAGGTGTTTTGTGCTAGGTTTCTTTATTCGGAATATTATGCATTTTGTATGAACTTTGTTCATTGGCTGAGAACATCCCTCTTACTTGGCTGGAAAACTACTGCCGAATTTCTTTTTTAGTGTTGTTGATCAATACAGTATATGTACATCTACTCCTCCCAATACTGTTGTGTTGTATGTGTGCTGGTTGAGTATTCTGCAGGTACCTTGGAGCTTAGCAGCCTGCCATGTCGGAGACTAAGTTTCAGTGTTTTTGTGTGTGTATATGTATCAATATGCATAATGTGGGCAAGTGTGTGTTGTGTTACATAATAATTCTTAGAGGACTACCATTTTTTCATGCCGATTAGGATCTTGTCATCCTTTCACTTTTTATTATCTGCTCTAGAAAAGCTTGAAATTAGACTTTGGACTGACCTTGATTATGATGCAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGTTCATATAGCTTCTTTGATTGATTTCTAAGCTTACTATGTTTCTCTTACTTTGATAAAGATATCTTAATTTAGGTTTCATAGAAGGGAAATTGTGTTTGTCACTTTGTCTAGTCTATGTTCTATTTCTTCTCTCTTATCTTTTAATTGTTATTCTAGCGCAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGTATGTATATTTTCTTTTGCTGCTTTCCTATCATCGCTTTCAGCTTTTCCTCTTATGTAGTGTCAATCTCATTCTTGTTACTGGCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGGTTTGAAGCAAGTTAGGAGGGTAGTGGAAGAGTGCATGATGAATAAAATGCATCCTGTATATAATATTAAGGTTTCTGGGTCTAATTTCTGCATATAATTTTTTGTTACTTCATGATAGCTCTCTGCGTAACTTGGTACCTCATGCAGATTCTCATGATGAAGAAAGAGCTCGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGTATGCCATTTTGACATGTACTTATTTGCTGATTTTATTTTACTAGAGTCATGTATTTATTTTTTACATAAGCGTTCTTTTTATCAGGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCCAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGGTGCTCTAGCTGCCTTTCACTTCCTGGAGGCGCAATTTGTCTGTATTTATATTTCAAAAAGCATTTAGGAAAATAGCATGATAATATAATACATAATAGTTATGATGATCTATTCTTATAATCATAAAAATAATAGTTGCAAAAAAAGAAATAGGCCACAACATACTAGATGCCATATTTAATAAAGATAAACTATTCAAGATTTAGGAAGTGCTGACATGTTATGAAAACATTATTTTATTGTCATCGTGACAGTTTCTATAGAGGTTAAACGCAGACATGTTTTGCATTCTAATTTTTTCTCAATGCATTCATCGATAAGACTTTTTGACATGTATTTGCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCTGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTATGGTATACTTTGCTGCGGCTTCTTGATTCTGCTTATCCAATATGTCGAACATTTTCATTCTTTTTACTATTGTATGTGATAATTGTTTTACCTCAATTCAGGAGGCGCCGAAGCAGCAGGATACACAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCAAAAGTCTTGAAGGTATGGGATTGTGTGTGTGGGCTGCATGTATATAGCCGTGGATGCTCCGAGAAGTTTTTTTTTATCTGGAATGGGTCCAATTTGTTTGATAAATTTGTTGCAATTTATATGATCTCGTTGCTTTGCAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCAGAAACTATCAATCCGGAAGCTTATATCGCATCATCCAGCGATCAGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAGAAGTTGGTAAGTATATTGTCAGGGGAGCGAGCTTCAACCCTTGTATATGGAATTACCAAAGGTTCTAGGTCTTTTTGTAGCACTTCTTTTTTTGTTTTGTTACATGTCGGATTAGAATCAGTGTCGTTATAATGAGAAAATCCCGAGCCTTATTTCACTGGGGTTACGTTGTGTTTTGCAATCTGCCTTTACTTTCGACGTTTTGAGCTGTTTCTGGCATTGCACTCCCCACCCACCACTACAAATTATATAAAAGAAAACCCTGATTTTTCCCCC

mRNA sequence

TTTGAATGAAAAGAAGAAAGAAGGAAATTAAAAAAGTATAAAAAAAATAAAAAAATCAGTATTATTTTTCCCTAATTTTGTTTTTCCGAAAAATTTTAGATTTAGGGTTCAGTTCTTCACCTTCACGCCTCACCTCTGTCTCTCATCTCTGGGCTCTCCCTCTCATCTTCGACACGCCGGCCTTAGTGCCTCACACTCAGTCTTCGAAGTCCGACTCTCCCTTGTCGTTGGAGAAGTTTAAGCTTAGTTACTGACTATTTATTTGGATTTGAGTTATGGAGGACATAGAGCAACAGCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAATTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGAAAAATATTTGCGAGACACATGGCCAGTTGTGAAGTCTGCATTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTACGCAAGAAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGCTCTCTGCGTAACTTGGTACCTCATGCAGATTCTCATGATGAAGAAAGAGCTCGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCCAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCTGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTATGGAGGCGCCGAAGCAGCAGGATACACAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCAAAAGTCTTGAAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCAGAAACTATCAATCCGGAAGCTTATATCGCATCATCCAGCGATCAGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAGAAGTTGGTAAGTATATTGTCAGGGGAGCGAGCTTCAACCCTTGTATATGGAATTACCAAAGGTTCTAGGTCTTTTTGTAGCACTTCTTTTTTTGTTTTGTTACATGTCGGATTAGAATCAGTGTCGTTATAATGAGAAAATCCCGAGCCTTATTTCACTGGGGTTACGTTGTGTTTTGCAATCTGCCTTTACTTTCGACGTTTTGAGCTGTTTCTGGCATTGCACTCCCCACCCACCACTACAAATTATATAAAAGAAAACCCTGATTTTTCCCCC

Coding sequence (CDS)

ATGGAGGACATAGAGCAACAGCAAAATAAAACCAAACACAAGGGGAAGCATGACAAGCCGAAGCCATGGGATGAGGATCCTAACATTGACCGTTGGAAGGTTGAGAAATTTGATCCCTCTTGGAATGAAGCTGGTATGCTCGAAGTCAGCTCTTTCTCTACTCTGTTTCCCGTGTACAGAGAAAAATATTTGCGAGACACATGGCCAGTTGTGAAGTCTGCATTGAAAGAGTTTGGTATTGTTGGTGAACTGAATCTGATTGAAGGATCAATGACAGTTTCAACAACTAGAAAGACTAGGGATCCGTATATTATTGTCAAGGCAAGGGATCTGATCAAGCTTTTGTCAAGAAGTGTTCCTGCTCCTCAGGCAATAAAAATACTGGATGATGAAATGCAATGTGACATTATTAAGATTGGGAACTTGGTACGCAAGAAGGAACGATTTGTTAAAAGAAGACGCCTTCTTGTGGGCCCAAATTCATCAACCTTAAAGGCGCTTGAAATATTGACAGGATGCTATATTCTTGTTCAGGGCAACACAGTTGCTGCGATGGGTTCATTCAAAGCTCTCTGCGTAACTTGGTACCTCATGCAGATTCTCATGATGAAGAAAGAGCTCGCTAATGATCCAGCACTTGCAAATGAAAATTGGGATCGATTTCTTCCCAAATTCAAGAAGAAAACTGTTAAACAAAAGAAGGTCAAGAGTAAACCCAAGAAGCAGTACACACCTTTCCCTCCTCCTCAGCAACCTAGCCAGATTGATATACAATTGGAAACTGGAGAATACTTCTTAAATGAAAAAAAGAAGTCTGCAAAGAAATGGCAGGATAAGCAGGAGAAGCAGGCAGAAAAAACTGCTGAAAACAAGAGAAAAAGAGAAGCTGCCTTTGTTCCTCCTATGGAGGCGCCGAAGCAGCAGGATACACAACCTGATGGAGATAAAAATGATATTGCCGAAATGGCAAAAGTCTTGAAGGAAAAGGCTAAGGCATTTGGAAAACGAAAAGCTGCAGAAACTATCAATCCGGAAGCTTATATCGCATCATCCAGCGATCAGCCACTTTTCAAGAAGAGATCCAAGACATCGTCGTAG

Protein sequence

MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKALCVTWYLMQILMMKKELANDPALANENWDRFLPKFKKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEAYIASSSDQPLFKKRSKTSS

Homology

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BLAST of MELO3C012627 vs. NCBI nr
Match: XP_008447125.1 (PREDICTED: KRR1 small subunit processome component homolog [Cucumis melo])

HSP 1 Score: 678.7 bits (1750), Expect = 2.8e-191
Identity = 358/379 (94.46%), Postives = 361/379 (95.25%), Query Frame = 0


Query: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60
           MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKAL---------CV-----TWYLMQILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFK L         C+       Y ++ILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA 360
           TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDQPLFKKRSKTSS 366
           YIASSSDQPLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of MELO3C012627 vs. NCBI nr
Match: KAA0056531.1 (KRR1 small subunit processome component-like protein [Cucumis melo var. makuwa] >TYK12099.1 KRR1 small subunit processome component-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 674.9 bits (1740), Expect = 4.0e-190
Identity = 356/379 (93.93%), Postives = 359/379 (94.72%), Query Frame = 0


Query: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60
           MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKAL---------CV-----TWYLMQILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFK L         C+       Y ++ILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA 360
           TAENKRKREAAFVPP EAPKQQDTQPDGDKNDIAEMAK LKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDQPLFKKRSKTSS 366
           YIASSSDQPLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of MELO3C012627 vs. NCBI nr
Match: XP_004139889.2 (KRR1 small subunit processome component homolog [Cucumis sativus] >XP_031744202.1 KRR1 small subunit processome component homolog [Cucumis sativus] >KGN44267.1 hypothetical protein Csa_015861 [Cucumis sativus])

HSP 1 Score: 657.9 bits (1696), Expect = 5.1e-185
Identity = 351/380 (92.37%), Postives = 358/380 (94.21%), Query Frame = 0


Query: 1   MEDIEQQ-QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60
           MEDIEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY
Sbjct: 1   MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60

Query: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120
           REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV
Sbjct: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120

Query: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180
           PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG
Sbjct: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180

Query: 181 NTVAAMGSFKAL---------CV-----TWYLMQILMMKKELANDPALANENWDRFLPKF 240
           NTVAAMGSFK L         C+       Y ++ILMM+KELANDPALANENWDRFLPKF
Sbjct: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 240

Query: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300
           KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Sbjct: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300

Query: 301 KTAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPE 360
           KTA+NKRKREAAFVPP EAPK QDT+PDGDKNDIAEMAK LKEKAKAFGKRKAAETINPE
Sbjct: 301 KTADNKRKREAAFVPPKEAPK-QDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPE 360

Query: 361 AYIASSSDQPLFKKRSKTSS 366
           AYIASSSD+PLFKKRSKTSS
Sbjct: 361 AYIASSSDRPLFKKRSKTSS 379

[Close]

BLAST of MELO3C012627 vs. NCBI nr
Match: XP_038888683.1 (KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888684.1 KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888685.1 KRR1 small subunit processome component homolog [Benincasa hispida] >XP_038888686.1 KRR1 small subunit processome component homolog [Benincasa hispida])

HSP 1 Score: 634.0 bits (1634), Expect = 7.8e-178
Identity = 338/379 (89.18%), Postives = 347/379 (91.56%), Query Frame = 0


Query: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60
           MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE GMLEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLR+TWPVVKSALKEFGIV ELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRETWPVVKSALKEFGIVCELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKAL---------CV-----TWYLMQILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFK L         C+       Y ++ILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSK KK YTPFPPPQQPSQIDIQLETGEYFL++KKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKQKKPYTPFPPPQQPSQIDIQLETGEYFLSDKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA 360
           TAENKRKREAAFVPP E P  QDT+PD D NDI+EMAK LKEKAKAFGKRKA E INPEA
Sbjct: 301 TAENKRKREAAFVPPKE-PPMQDTEPDQDNNDISEMAKALKEKAKAFGKRKAMEAINPEA 360

Query: 361 YIASSSDQPLFKKRSKTSS 366
           YIASSSD+P FKKRSKTSS
Sbjct: 361 YIASSSDRPHFKKRSKTSS 378

[Close]

BLAST of MELO3C012627 vs. NCBI nr
Match: XP_023511730.1 (KRR1 small subunit processome component homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 612.5 bits (1578), Expect = 2.4e-171
Identity = 327/378 (86.51%), Postives = 339/378 (89.68%), Query Frame = 0


Query: 2   EDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYRE 61
           E++EQQQNKTKHKGKHDKPKPWDEDPNIDRW VEKFDPSWNE GMLEVSSFSTLFPVYRE
Sbjct: 4   EELEQQQNKTKHKGKHDKPKPWDEDPNIDRWTVEKFDPSWNEGGMLEVSSFSTLFPVYRE 63

Query: 62  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPA 121
           KYL+D WPVVKSALKEFGI  ELNL+EGSMTVSTTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 64  KYLQDAWPVVKSALKEFGIACELNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123

Query: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183

Query: 182 VAAMGSFKAL---------CV-----TWYLMQILMMKKELANDPALANENWDRFLPKFKK 241
           VAAMGSFK L         C+       Y ++ILMMKKELANDPALANENWDRFLPKFKK
Sbjct: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 243

Query: 242 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKT 301
           KTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL++KKKSAKKWQ+KQEKQAEKT
Sbjct: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303

Query: 302 AENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEAY 361
           AENKRKREAAFVPP E PK QDT  DGD NDIA MAK LKEKAKA GKRKAAE+INPEAY
Sbjct: 304 AENKRKREAAFVPPKEPPK-QDTTIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAY 363

Query: 362 IASSSDQPLFKKRSKTSS 366
           IASSSDQ  FKKRSK SS
Sbjct: 364 IASSSDQKHFKKRSKASS 380

[Close]

BLAST of MELO3C012627 vs. ExPASy Swiss-Prot
Match: O74777 (KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mis3 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 5.6e-86
Identity = 174/314 (55.41%), Postives = 228/314 (72.61%), Query Frame = 0


Query: 9   NKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTW 68
           NK K   ++ + KPWD D +ID WK+E F    ++   LE SSF+TLFP YREKYLR+ W
Sbjct: 15  NKNK---RYRRDKPWDTD-DIDHWKIEPFTKDDSKESFLEESSFATLFPKYREKYLREVW 74

Query: 69  PVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKIL 128
           P V  AL +FGI   L+L+EGSMTV TTRKT DPY I+ ARDLIKLL+RSVP PQA+KI+
Sbjct: 75  PHVTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARSVPFPQAVKIM 134

Query: 129 DDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSF 188
            D + CDIIKIGN++R KERFVKRR+ L+G N  TLKALE+LT CYILVQG TVA MG +
Sbjct: 135 QDGVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYILVQGTTVAVMGGY 194

Query: 189 KAL---------CV----TWYLMQILMMKKELANDPALANENWDRFLPKFKKKTV-KQKK 248
           K L         C+      Y ++ LM+K+ELA DP LANE+WDRFLP+FKK+ V ++K 
Sbjct: 195 KGLKEVRRIVEDCMHNIHPIYHIKELMIKRELAKDPTLANESWDRFLPQFKKRNVARRKP 254

Query: 249 VKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRKR 308
            K +  K+YTPFPP Q PS++D+++E+GEYFL +++K  KK  +K+E+Q EK  E +++R
Sbjct: 255 AKIRETKEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEKKEQQKEKKKEKEKER 314

[Close]

BLAST of MELO3C012627 vs. ExPASy Swiss-Prot
Match: B4N0P7 (KRR1 small subunit processome component homolog OS=Drosophila willistoni OX=7260 GN=dbe PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 2.9e-82
Identity = 173/332 (52.11%), Postives = 228/332 (68.67%), Query Frame = 0


Query: 26  DPNIDRW--KVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDTWPVVKSALKEFGIVGE 85
           DP  + W  K+  F  + N  GM+E SSF+TLFP YREKYL++ WP+V+ A+ E  +  E
Sbjct: 15  DPVDNAWSLKIPAFKETDNPHGMIEESSFATLFPKYREKYLKEVWPLVEQAVGEHHLKAE 74

Query: 86  LNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQCDIIKIGNLV 145
           L+L+EGSM V TTRKT DPYII+KARD+IKL++RSVP  QA ++L DE+ CDIIKIGNLV
Sbjct: 75  LDLVEGSMVVKTTRKTWDPYIIIKARDMIKLMARSVPFEQAKRVLQDEIGCDIIKIGNLV 134

Query: 146 RKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKAL------------ 205
           +KKE+FVKRR+ L+GPN +TLK++E+LT CY+LVQGNTV+A+G +K L            
Sbjct: 135 QKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYKGLQQVRDIVLETMN 194

Query: 206 -CVTWYLMQILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKSKPKKQYTPFP 265
                Y ++ LM+K+EL  DP LANE+W RFLPKFK K +   KQ KVK KPKK+YTPFP
Sbjct: 195 NVHPIYNIKALMIKRELMKDPKLANEDWSRFLPKFKNKNLSKRKQPKVK-KPKKEYTPFP 254

Query: 266 PPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRKREAAFVPPMEAP-- 325
           P Q  S+ID QL +GEYFLN+++K AK+ Q++Q KQAE   +   +R   F+PP E P  
Sbjct: 255 PAQPESKIDKQLASGEYFLNKEQKQAKRQQERQTKQAEAAKKQDERRNKDFIPPTEEPPT 314

Query: 326 ----KQQDTQPDGDKNDIAEM-AKVLKEKAKA 333
               K  D      + D+  + AK+LK   K+
Sbjct: 315 GSKRKANDNDSSDSRVDVQSLKAKLLKANKKS 345

[Close]

BLAST of MELO3C012627 vs. ExPASy Swiss-Prot
Match: B3LU25 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain RM11-1a) OX=285006 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.4e-81
Identity = 169/305 (55.41%), Postives = 216/305 (70.82%), Query Frame = 0


Query: 17  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSA 76
           H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 77  LKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 136
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 137 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKAL--- 196
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FK L   
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 197 ------CV----TWYLMQILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKSK 256
                 C+      Y ++ LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++ 
Sbjct: 185 RRVVEDCMKNIHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNV 244

Query: 257 PKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRKREAAF 304
            KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+  E + +R   F
Sbjct: 245 EKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKDF 304

[Close]

BLAST of MELO3C012627 vs. ExPASy Swiss-Prot
Match: B5VEQ2 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain AWRI1631) OX=545124 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.4e-81
Identity = 169/305 (55.41%), Postives = 216/305 (70.82%), Query Frame = 0


Query: 17  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSA 76
           H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 77  LKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 136
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 137 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKAL--- 196
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FK L   
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 197 ------CV----TWYLMQILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKSK 256
                 C+      Y ++ LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++ 
Sbjct: 185 RRVVEDCMKNIHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNV 244

Query: 257 PKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRKREAAF 304
            KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+  E + +R   F
Sbjct: 245 EKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKDF 304

[Close]

BLAST of MELO3C012627 vs. ExPASy Swiss-Prot
Match: C8Z430 (KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) OX=643680 GN=KRR1 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.4e-81
Identity = 169/305 (55.41%), Postives = 216/305 (70.82%), Query Frame = 0


Query: 17  HDKPKPWDEDPNIDRWKVEKFDPSWNEAG--MLEVSSFSTLFPVYREKYLRDTWPVVKSA 76
           H++ KPWD D +ID+WK+E+F    N +G    E SSF TLFP YRE YL+  W  V  A
Sbjct: 5   HNRDKPWDTD-DIDKWKIEEFKEEDNASGQPFAEESSFMTLFPKYRESYLKTIWNDVTRA 64

Query: 77  LKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILDDEMQC 136
           L +  I   L+L+EGSMTV TTRKT DP II+KARDLIKLL+RSVP PQA+KIL D+M C
Sbjct: 65  LDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQDDMAC 124

Query: 137 DIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKAL--- 196
           D+IKIGN V  KERFVKRR+ LVGPN +TLKALE+LT CYILVQGNTV+AMG FK L   
Sbjct: 125 DVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKGLKEV 184

Query: 197 ------CV----TWYLMQILMMKKELANDPALANENWDRFLPKFKKKTV---KQKKVKSK 256
                 C+      Y ++ LM+K+ELA  P LANE+W RFLP FKK+ V   K KK+++ 
Sbjct: 185 RRVVEDCMKNIHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPKKIRNV 244

Query: 257 PKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRKREAAF 304
            KK YTPFPP Q P ++D+++E+GEYFL++++K  KK  +++EKQ E+  E + +R   F
Sbjct: 245 EKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKDF 304

[Close]

BLAST of MELO3C012627 vs. ExPASy TrEMBL
Match: A0A1S3BGN7 (KRR1 small subunit processome component OS=Cucumis melo OX=3656 GN=LOC103489650 PE=3 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.3e-191
Identity = 358/379 (94.46%), Postives = 361/379 (95.25%), Query Frame = 0


Query: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60
           MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKAL---------CV-----TWYLMQILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFK L         C+       Y ++ILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA 360
           TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDQPLFKKRSKTSS 366
           YIASSSDQPLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of MELO3C012627 vs. ExPASy TrEMBL
Match: A0A5D3CP78 (KRR1 small subunit processome component OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00300 PE=3 SV=1)

HSP 1 Score: 674.9 bits (1740), Expect = 1.9e-190
Identity = 356/379 (93.93%), Postives = 359/379 (94.72%), Query Frame = 0


Query: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60
           MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR
Sbjct: 1   MEDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYR 60

Query: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120
           EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP
Sbjct: 61  EKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVP 120

Query: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180
           APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN
Sbjct: 121 APQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGN 180

Query: 181 TVAAMGSFKAL---------CV-----TWYLMQILMMKKELANDPALANENWDRFLPKFK 240
           TVAAMGSFK L         C+       Y ++ILMMKKELANDPALANENWDRFLPKFK
Sbjct: 181 TVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFK 240

Query: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300
           KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK
Sbjct: 241 KKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEK 300

Query: 301 TAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEA 360
           TAENKRKREAAFVPP EAPKQQDTQPDGDKNDIAEMAK LKEKAKAFGKRKAAETINPEA
Sbjct: 301 TAENKRKREAAFVPPKEAPKQQDTQPDGDKNDIAEMAKALKEKAKAFGKRKAAETINPEA 360

Query: 361 YIASSSDQPLFKKRSKTSS 366
           YIASSSDQPLFKKRSKTSS
Sbjct: 361 YIASSSDQPLFKKRSKTSS 379

[Close]

BLAST of MELO3C012627 vs. ExPASy TrEMBL
Match: A0A0A0K7G6 (KRR1 small subunit processome component OS=Cucumis sativus OX=3659 GN=Csa_7G237820 PE=3 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.5e-185
Identity = 351/380 (92.37%), Postives = 358/380 (94.21%), Query Frame = 0


Query: 1   MEDIEQQ-QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60
           MEDIEQQ QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY
Sbjct: 1   MEDIEQQHQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVY 60

Query: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120
           REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV
Sbjct: 61  REKYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSV 120

Query: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180
           PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG
Sbjct: 121 PAPQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQG 180

Query: 181 NTVAAMGSFKAL---------CV-----TWYLMQILMMKKELANDPALANENWDRFLPKF 240
           NTVAAMGSFK L         C+       Y ++ILMM+KELANDPALANENWDRFLPKF
Sbjct: 181 NTVAAMGSFKGLKQVRRVVEECMMNKMHPVYNIKILMMRKELANDPALANENWDRFLPKF 240

Query: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300
           KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE
Sbjct: 241 KKKTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAE 300

Query: 301 KTAENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPE 360
           KTA+NKRKREAAFVPP EAPK QDT+PDGDKNDIAEMAK LKEKAKAFGKRKAAETINPE
Sbjct: 301 KTADNKRKREAAFVPPKEAPK-QDTKPDGDKNDIAEMAKSLKEKAKAFGKRKAAETINPE 360

Query: 361 AYIASSSDQPLFKKRSKTSS 366
           AYIASSSD+PLFKKRSKTSS
Sbjct: 361 AYIASSSDRPLFKKRSKTSS 379

[Close]

BLAST of MELO3C012627 vs. ExPASy TrEMBL
Match: A0A6J1GLG6 (KRR1 small subunit processome component OS=Cucurbita moschata OX=3662 GN=LOC111455438 PE=3 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 2.0e-171
Identity = 327/378 (86.51%), Postives = 339/378 (89.68%), Query Frame = 0


Query: 2   EDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYRE 61
           E+IEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFD SWNE GMLEVSSFSTLFPVYRE
Sbjct: 4   EEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDASWNEGGMLEVSSFSTLFPVYRE 63

Query: 62  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPA 121
           KYL+D WPVVKSALKEFGI  +LNL+EGSMTVSTTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 64  KYLQDAWPVVKSALKEFGIACDLNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123

Query: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183

Query: 182 VAAMGSFKAL---------CV-----TWYLMQILMMKKELANDPALANENWDRFLPKFKK 241
           VAAMGSFK L         C+       Y ++ILMMKKELANDPALANENWDRFLPKFKK
Sbjct: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALANENWDRFLPKFKK 243

Query: 242 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKT 301
           KTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL++KKKSAKKWQ+KQEKQAEKT
Sbjct: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303

Query: 302 AENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEAY 361
           AENKRKREAAFVPP E PK QDT  DGD NDIA MAK LKEKAKA GKRKAAE+INPEAY
Sbjct: 304 AENKRKREAAFVPPKEPPK-QDTNIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAY 363

Query: 362 IASSSDQPLFKKRSKTSS 366
           IASSSDQ  FKKRSK SS
Sbjct: 364 IASSSDQKHFKKRSKASS 380

[Close]

BLAST of MELO3C012627 vs. ExPASy TrEMBL
Match: A0A6J1HWB5 (KRR1 small subunit processome component OS=Cucurbita maxima OX=3661 GN=LOC111468435 PE=3 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 2.6e-171
Identity = 326/378 (86.24%), Postives = 340/378 (89.95%), Query Frame = 0


Query: 2   EDIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYRE 61
           E+IEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNE GMLEVSSFSTLFPVYRE
Sbjct: 4   EEIEQQQNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEGGMLEVSSFSTLFPVYRE 63

Query: 62  KYLRDTWPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPA 121
           KYL+D WPVVKSALKEFGI  ELNL+EGSMTVSTTRKT+DPYIIVKARDLIKLLSRSVPA
Sbjct: 64  KYLQDAWPVVKSALKEFGIACELNLVEGSMTVSTTRKTKDPYIIVKARDLIKLLSRSVPA 123

Query: 122 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNT 181
           PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRR LVGPNSSTLKALEILTGCYILVQGNT
Sbjct: 124 PQAIKILDDEMQCDIIKIGNLVRKKERFVKRRRFLVGPNSSTLKALEILTGCYILVQGNT 183

Query: 182 VAAMGSFKAL---------CV-----TWYLMQILMMKKELANDPALANENWDRFLPKFKK 241
           VAAMGSFK L         C+       Y ++ILMMKKELANDPALA+ENWDRFLPKFKK
Sbjct: 184 VAAMGSFKGLKQVRRIVEECMMNKMHPVYNIKILMMKKELANDPALASENWDRFLPKFKK 243

Query: 242 KTVKQKKVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKT 301
           KTVKQKKVKSK KK YTPFPPPQ PSQIDIQLETGEYFL++KKKSAKKWQ+KQEKQAEKT
Sbjct: 244 KTVKQKKVKSKQKKPYTPFPPPQPPSQIDIQLETGEYFLSDKKKSAKKWQEKQEKQAEKT 303

Query: 302 AENKRKREAAFVPPMEAPKQQDTQPDGDKNDIAEMAKVLKEKAKAFGKRKAAETINPEAY 361
           AENKRKREA+FVPP E PK QDT+ DGD NDIA MAK LKEKAKA GKRKAAE+INPEAY
Sbjct: 304 AENKRKREASFVPPKETPK-QDTKIDGDNNDIATMAKALKEKAKALGKRKAAESINPEAY 363

Query: 362 IASSSDQPLFKKRSKTSS 366
           IA SSDQ  FKKRSK SS
Sbjct: 364 IALSSDQKHFKKRSKASS 380

[Close]

BLAST of MELO3C012627 vs. TAIR 10
Match: AT5G08420.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 466.1 bits (1198), Expect = 2.6e-131
Identity = 251/373 (67.29%), Postives = 291/373 (78.02%), Query Frame = 0


Query: 8   QNKTKHKGKHDKPKPWDEDPNIDRWKVEKFDPSWNEAGMLEVSSFSTLFPVYREKYLRDT 67
           + + K KGKH+KPKPWD+DPNIDRW +EKFDP+WN  GM E S+FSTLFP YREKYL++ 
Sbjct: 15  EKREKKKGKHEKPKPWDDDPNIDRWTIEKFDPAWNPTGMTETSTFSTLFPQYREKYLQEC 74

Query: 68  WPVVKSALKEFGIVGELNLIEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKI 127
           WP V+SALKE+G+  +LNL+EGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKI
Sbjct: 75  WPRVESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKI 134

Query: 128 LDDEMQCDIIKIGNLVRKKERFVKRRRLLVGPNSSTLKALEILTGCYILVQGNTVAAMGS 187
           L+DE+QCDIIKIGNLVR KERFVKRR+ LVGPNSSTLKALEILT CYILVQG+TVAAMG 
Sbjct: 135 LEDEVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTNCYILVQGSTVAAMGP 194

Query: 188 FKAL---------CV-----TWYLMQILMMKKELANDPALANENWDRFLPKFKKKTVKQK 247
           FK L         CV       Y ++ LMMKKEL  DPALANE+WDRFLP F+KK VKQK
Sbjct: 195 FKGLKQLRRIVEDCVQNIMHPVYHIKTLMMKKELEKDPALANESWDRFLPTFRKKNVKQK 254

Query: 248 KVKSKPKKQYTPFPPPQQPSQIDIQLETGEYFLNEKKKSAKKWQDKQEKQAEKTAENKRK 307
           K KSK KK YTPFPPPQ PS+ID+QLE+GEYF+++KKKS KKWQ+KQEKQ+EK+ ENKRK
Sbjct: 255 KPKSKEKKPYTPFPPPQPPSKIDMQLESGEYFMSDKKKSEKKWQEKQEKQSEKSTENKRK 314

Query: 308 REAAFVPPMEAPKQQD--TQPDGDKNDIAEMAKVLKEKAKAFGK-RKAAETINPEAYIAS 363
           R+A+F+PP E         + +  KNDI E+   LK K K   K +K  E +N E YIA 
Sbjct: 315 RDASFLPPEEPMNNNSNANKSEDGKNDITELTNSLKSKTKELKKQKKTHERVNAEEYIAG 374

The following BLAST results are available for this feature:

BLAST of MELO3C012627 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447125.1	2.8e-191	94.46	PREDICTED: KRR1 small subunit processome component homolog [Cucumis melo]	[more]
KAA0056531.1	4.0e-190	93.93	KRR1 small subunit processome component-like protein [Cucumis melo var. makuwa] ...	[more]
XP_004139889.2	5.1e-185	92.37	KRR1 small subunit processome component homolog [Cucumis sativus] >XP_031744202....	[more]
XP_038888683.1	7.8e-178	89.18	KRR1 small subunit processome component homolog [Benincasa hispida] >XP_03888868...	[more]
XP_023511730.1	2.4e-171	86.51	KRR1 small subunit processome component homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C012627 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74777	5.6e-86	55.41	KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (st...	[more]
B4N0P7	2.9e-82	52.11	KRR1 small subunit processome component homolog OS=Drosophila willistoni OX=7260...	[more]
B3LU25	1.4e-81	55.41	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain RM11...	[more]
B5VEQ2	1.4e-81	55.41	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain AWRI...	[more]
C8Z430	1.4e-81	55.41	KRR1 small subunit processome component OS=Saccharomyces cerevisiae (strain Lalv...	[more]

BLAST of MELO3C012627 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGN7	1.3e-191	94.46	KRR1 small subunit processome component OS=Cucumis melo OX=3656 GN=LOC103489650 ...	[more]
A0A5D3CP78	1.9e-190	93.93	KRR1 small subunit processome component OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0K7G6	2.5e-185	92.37	KRR1 small subunit processome component OS=Cucumis sativus OX=3659 GN=Csa_7G2378...	[more]
A0A6J1GLG6	2.0e-171	86.51	KRR1 small subunit processome component OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HWB5	2.6e-171	86.24	KRR1 small subunit processome component OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]

BLAST of MELO3C012627 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08420.1	2.6e-131	67.29	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041174	Krr1, KH1 domain	PFAM	PF17903	KH_8	coord: 50..130 e-value: 4.6E-30 score: 103.6
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 131..220 e-value: 1.1E-31 score: 110.7
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 44..130 e-value: 2.5E-41 score: 141.5
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 131..222
IPR024166	Ribosomal RNA assembly KRR1	PIRSF	PIRSF006515	KRR1	coord: 1..339 e-value: 3.1E-131 score: 435.3
IPR024166	Ribosomal RNA assembly KRR1	PANTHER	PTHR12581	HIV-1 REV BINDING PROTEIN 2, 3	coord: 2..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..365
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..365
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..338

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012627.1	MELO3C012627.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding