MELO3C012617 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012617
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr01: 20193291 .. 20193461 (+)
RNA-Seq Expression	MELO3C012617
Synteny	MELO3C012617

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGGAGAAGGCGCGGAGGCTGAAAATGCAAAAAAGTGGCGGTTGTTCAGATTGAATTCTGCTTTTGACAACCGCCGGCAAAGAGCTCAAGTGGATAAAAGCAGGGGCCACCCTCTTCCGCCGCCAACCTTGAATTGTCAACGCAATCAACAACAGGTGAATCTTTAA

mRNA sequence

ATGTACGGAGAAGGCGCGGAGGCTGAAAATGCAAAAAAGTGGCGGTTGTTCAGATTGAATTCTGCTTTTGACAACCGCCGGCAAAGAGCTCAAGTGGATAAAAGCAGGGGCCACCCTCTTCCGCCGCCAACCTTGAATTGTCAACGCAATCAACAACAGGTGAATCTTTAA

Coding sequence (CDS)

ATGTACGGAGAAGGCGCGGAGGCTGAAAATGCAAAAAAGTGGCGGTTGTTCAGATTGAATTCTGCTTTTGACAACCGCCGGCAAAGAGCTCAAGTGGATAAAAGCAGGGGCCACCCTCTTCCGCCGCCAACCTTGAATTGTCAACGCAATCAACAACAGGTGAATCTTTAA

Protein sequence

MYGEGAEAENAKKWRLFRLNSAFDNRRQRAQVDKSRGHPLPPPTLNCQRNQQQVNL

Homology

[Close]

BLAST of MELO3C012617 vs. NCBI nr
Match: KAE8646104.1 (hypothetical protein Csa_015620, partial [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13
Identity = 44/54 (81.48%), Postives = 45/54 (83.33%), Query Frame = 0


Query: 1  MYGEGAEAENAKKWRLFRLNSAFDNRRQRAQVD-KSRGHPLPPPTLNCQRNQQQ 54
          MYGE AEAENAKKWR FRLNS   NRRQ AQVD  SRGHPLP PTLNCQR+QQQ
Sbjct: 1  MYGEVAEAENAKKWRFFRLNSDSYNRRQSAQVDTNSRGHPLPSPTLNCQRHQQQ 54

[Close]

BLAST of MELO3C012617 vs. ExPASy TrEMBL
Match: A0A0A0K3J2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G237900 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.9e-14
Identity = 44/54 (81.48%), Postives = 45/54 (83.33%), Query Frame = 0


Query: 1  MYGEGAEAENAKKWRLFRLNSAFDNRRQRAQVD-KSRGHPLPPPTLNCQRNQQQ 54
          MYGE AEAENAKKWR FRLNS   NRRQ AQVD  SRGHPLP PTLNCQR+QQQ
Sbjct: 1  MYGEVAEAENAKKWRFFRLNSDSYNRRQSAQVDTNSRGHPLPSPTLNCQRHQQQ 54

The following BLAST results are available for this feature:

BLAST of MELO3C012617 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646104.1	1.2e-13	81.48	hypothetical protein Csa_015620, partial [Cucumis sativus]	[more]

BLAST of MELO3C012617 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C012617 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3J2	5.9e-14	81.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G237900 PE=4 SV=1	[more]

BLAST of MELO3C012617 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012617.1	MELO3C012617.1	mRNA