MELO3C012582 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012582
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr01: 19465125 .. 19465558 (+)
RNA-Seq Expression	MELO3C012582
Synteny	MELO3C012582

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCTCAAACAACTGCTCAAAGGGGTGCTTAATTGTGTTATGATCATGAGGAGCCTTCCAGTAATCTTGCACATTTGATTCCTCAGATGAAGATCACATTGTTATTTCTCGACTTGTACGACATCCTCGAAGAACTTCTGTTGCATCTCCTCGTCGCCCTCTTCCTGGTTCCTCTGATCCCACAGAGAAAGTATTTGCTACCACTGTAGGATTTTCTGCTCCAAATGTTGATGCCTTCATTCCTTATCGGGAATCTAATTATACAAAGAATGTATATGTTCTTTCTATTGATGACTCTACCCCTAGCGTTACTATTGACACCACTGCTCCTGGCATTCTTGACTCTACACTTATGGATAATTCTGCCCCCTTAGTTCATTTGCTCATGCAGAGGGCACTTCTACTTCAACAGAATGGGTATGTCCTCTAG

mRNA sequence

ATGGTTGCTCAAACAACTGCTCAAAGGGATGAAGATCACATTGTTATTTCTCGACTTGTACGACATCCTCGAAGAACTTCTGTTGCATCTCCTCGTCGCCCTCTTCCTGGTTCCTCTGATCCCACAGAGAAAGTATTTGCTACCACTGTAGGATTTTCTGCTCCAAATGTTGATGCCTTCATTCCTTATCGGGAATCTAATTATACAAAGAATGTATATGTTCTTTCTATTGATGACTCTACCCCTAGCGTTACTATTGACACCACTGCTCCTGGCATTCTTGACTCTACACTTATGGATAATTCTGCCCCCTTAGTTCATTTGCTCATGCAGAGGGCACTTCTACTTCAACAGAATGGGTATGTCCTCTAG

Coding sequence (CDS)

ATGGTTGCTCAAACAACTGCTCAAAGGGATGAAGATCACATTGTTATTTCTCGACTTGTACGACATCCTCGAAGAACTTCTGTTGCATCTCCTCGTCGCCCTCTTCCTGGTTCCTCTGATCCCACAGAGAAAGTATTTGCTACCACTGTAGGATTTTCTGCTCCAAATGTTGATGCCTTCATTCCTTATCGGGAATCTAATTATACAAAGAATGTATATGTTCTTTCTATTGATGACTCTACCCCTAGCGTTACTATTGACACCACTGCTCCTGGCATTCTTGACTCTACACTTATGGATAATTCTGCCCCCTTAGTTCATTTGCTCATGCAGAGGGCACTTCTACTTCAACAGAATGGGTATGTCCTCTAG

Protein sequence

MVAQTTAQRDEDHIVISRLVRHPRRTSVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKNVYVLSIDDSTPSVTIDTTAPGILDSTLMDNSAPLVHLLMQRALLLQQNGYVL

Homology

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BLAST of MELO3C012582 vs. NCBI nr
Match: KAA0062818.1 (uncharacterized protein E6C27_scaffold357G00390 [Cucumis melo var. makuwa] >TYJ96734.1 uncharacterized protein E5676_scaffold986G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 212.2 bits (539), Expect = 2.5e-51
Identity = 108/114 (94.74%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 10  DEDHIVISRLVRHPRRTSVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYT 69
           +EDHIVI+RLVRHPRRT VASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYT
Sbjct: 45  NEDHIVIARLVRHPRRTPVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYT 104

Query: 70  KNVYVLSIDDSTPSVTIDTTAPGILDSTLMDNSAPLVHLLMQRALLLQQNGYVL 124
           KNVY LSIDDSTPSVTIDTTAPGILDSTLMDN APLVHLLMQRALLLQQ GYVL
Sbjct: 105 KNVYALSIDDSTPSVTIDTTAPGILDSTLMDNFAPLVHLLMQRALLLQQKGYVL 158

[Close]

BLAST of MELO3C012582 vs. NCBI nr
Match: TYK09630.1 (hypothetical protein E5676_scaffold447G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 5.0e-12
Identity = 46/83 (55.42%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 28  VASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKN------VYVLSIDDST 87
           V SP      SS P EKVF   +G  APNVDAF+P R+SNY +N      V+   +DDST
Sbjct: 176 VVSPCYLPSHSSHPREKVFTAPIGVYAPNVDAFVPSRKSNYIENVFAPFVVFAPFVDDST 235

Query: 88  PSVTIDTTAPGILDSTLMDNSAP 105
           PS TIDTTAP +LDST +DNS P
Sbjct: 236 PSDTIDTTAPRLLDSTPVDNSTP 258

[Close]

BLAST of MELO3C012582 vs. NCBI nr
Match: KAA0025826.1 (hypothetical protein E6C27_scaffold34G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 81.6 bits (200), Expect = 5.0e-12
Identity = 46/83 (55.42%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 28  VASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKN------VYVLSIDDST 87
           V SP      SS P EKVF   +G  APNVDAF+P R+SNY +N      V+   +DDST
Sbjct: 9   VVSPCYLPSHSSHPREKVFTAPIGVYAPNVDAFVPSRKSNYIENVFAPFVVFAPFVDDST 68

Query: 88  PSVTIDTTAPGILDSTLMDNSAP 105
           PS TIDTTAP +LDST +DNS P
Sbjct: 69  PSDTIDTTAPRLLDSTPVDNSTP 91

[Close]

BLAST of MELO3C012582 vs. NCBI nr
Match: TYK27358.1 (uncharacterized protein E5676_scaffold325G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 9.2e-06
Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 25  RTSVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKNVYVLSIDDSTPSV 84
           R  +A PRRP  GSSD T+KVFAT+V     NVD F+    S+Y +NV   SIDDSTP  
Sbjct: 2   RAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH- 61

Query: 85  TIDTTAPGILDSTLMDNSAP 105
            ID  A  + + T ++ +AP
Sbjct: 62  -IDDFALNVDNPTSIEITAP 79

[Close]

BLAST of MELO3C012582 vs. NCBI nr
Match: XP_008450238.1 (PREDICTED: uncharacterized protein LOC103491899 [Cucumis melo])

HSP 1 Score: 60.8 bits (146), Expect = 9.2e-06
Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 25  RTSVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKNVYVLSIDDSTPSV 84
           R  +A PRRP  GSSD T+KVFAT+V     NVD F+    S+Y +NV   SIDDSTP  
Sbjct: 2   RAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH- 61

Query: 85  TIDTTAPGILDSTLMDNSAP 105
            ID  A  + + T ++ +AP
Sbjct: 62  -IDDFALNVDNPTSIEITAP 79

[Close]

BLAST of MELO3C012582 vs. ExPASy TrEMBL
Match: A0A5A7V5C2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00230 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51
Identity = 108/114 (94.74%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 10  DEDHIVISRLVRHPRRTSVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYT 69
           +EDHIVI+RLVRHPRRT VASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYT
Sbjct: 45  NEDHIVIARLVRHPRRTPVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYT 104

Query: 70  KNVYVLSIDDSTPSVTIDTTAPGILDSTLMDNSAPLVHLLMQRALLLQQNGYVL 124
           KNVY LSIDDSTPSVTIDTTAPGILDSTLMDN APLVHLLMQRALLLQQ GYVL
Sbjct: 105 KNVYALSIDDSTPSVTIDTTAPGILDSTLMDNFAPLVHLLMQRALLLQQKGYVL 158

[Close]

BLAST of MELO3C012582 vs. ExPASy TrEMBL
Match: A0A5A7SJ51 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G00830 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.4e-12
Identity = 46/83 (55.42%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 28  VASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKN------VYVLSIDDST 87
           V SP      SS P EKVF   +G  APNVDAF+P R+SNY +N      V+   +DDST
Sbjct: 9   VVSPCYLPSHSSHPREKVFTAPIGVYAPNVDAFVPSRKSNYIENVFAPFVVFAPFVDDST 68

Query: 88  PSVTIDTTAPGILDSTLMDNSAP 105
           PS TIDTTAP +LDST +DNS P
Sbjct: 69  PSDTIDTTAPRLLDSTPVDNSTP 91

[Close]

BLAST of MELO3C012582 vs. ExPASy TrEMBL
Match: A0A5D3CE62 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00260 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.4e-12
Identity = 46/83 (55.42%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 28  VASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKN------VYVLSIDDST 87
           V SP      SS P EKVF   +G  APNVDAF+P R+SNY +N      V+   +DDST
Sbjct: 176 VVSPCYLPSHSSHPREKVFTAPIGVYAPNVDAFVPSRKSNYIENVFAPFVVFAPFVDDST 235

Query: 88  PSVTIDTTAPGILDSTLMDNSAP 105
           PS TIDTTAP +LDST +DNS P
Sbjct: 236 PSDTIDTTAPRLLDSTPVDNSTP 258

[Close]

BLAST of MELO3C012582 vs. ExPASy TrEMBL
Match: A0A5D3DV34 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00340 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.5e-06
Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 25  RTSVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKNVYVLSIDDSTPSV 84
           R  +A PRRP  GSSD T+KVFAT+V     NVD F+    S+Y +NV   SIDDSTP  
Sbjct: 2   RAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH- 61

Query: 85  TIDTTAPGILDSTLMDNSAP 105
            ID  A  + + T ++ +AP
Sbjct: 62  -IDDFALNVDNPTSIEITAP 79

[Close]

BLAST of MELO3C012582 vs. ExPASy TrEMBL
Match: A0A1S3BN68 (uncharacterized protein LOC103491899 OS=Cucumis melo OX=3656 GN=LOC103491899 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.5e-06
Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 25  RTSVASPRRPLPGSSDPTEKVFATTVGFSAPNVDAFIPYRESNYTKNVYVLSIDDSTPSV 84
           R  +A PRRP  GSSD T+KVFAT+V     NVD F+    S+Y +NV   SIDDSTP  
Sbjct: 2   RAPIAFPRRPPYGSSDSTKKVFATSVRVFTSNVDEFVLGSTSHYIENVSTPSIDDSTPH- 61

Query: 85  TIDTTAPGILDSTLMDNSAP 105
            ID  A  + + T ++ +AP
Sbjct: 62  -IDDFALNVDNPTSIEITAP 79

The following BLAST results are available for this feature:

BLAST of MELO3C012582 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062818.1	2.5e-51	94.74	uncharacterized protein E6C27_scaffold357G00390 [Cucumis melo var. makuwa] >TYJ9...	[more]
TYK09630.1	5.0e-12	55.42	hypothetical protein E5676_scaffold447G00260 [Cucumis melo var. makuwa]	[more]
KAA0025826.1	5.0e-12	55.42	hypothetical protein E6C27_scaffold34G00830 [Cucumis melo var. makuwa]	[more]
TYK27358.1	9.2e-06	47.50	uncharacterized protein E5676_scaffold325G00340 [Cucumis melo var. makuwa]	[more]
XP_008450238.1	9.2e-06	47.50	PREDICTED: uncharacterized protein LOC103491899 [Cucumis melo]	[more]

BLAST of MELO3C012582 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C012582 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5C2	1.2e-51	94.74	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SJ51	2.4e-12	55.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CE62	2.4e-12	55.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DV34	4.5e-06	47.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BN68	4.5e-06	47.50	uncharacterized protein LOC103491899 OS=Cucumis melo OX=3656 GN=LOC103491899 PE=...	[more]

BLAST of MELO3C012582 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012582.1	MELO3C012582.1	mRNA