MELO3C012240 (gene) Melon (DHL92) v4

Overview


Name	MELO3C012240
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	protein NIM1-INTERACTING 2
Location	chr10: 1737120 .. 1737808 (+)
RNA-Seq Expression	MELO3C012240
Synteny	MELO3C012240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGCATCAAAAGCCTAAAAGAAAGATTCTCTCGCCTTCACTACTGACCACTAAAGAAAAAACGATGCCGTTTGAGTTGTTTCCAGGGAGTCGGAGTACGGACAGAGGGAAAAGAAAGCGGGGAGACGACGCCGGCGCTGGAAACCAGAAGGACGTTGTGACCAAGGAAGGAAAAGAAGCGGAGACGGCGACGGATGAAGAAGTGGAGGAGTTCTTCTCCATTCTTAAGCGATTACACGCTGCGACGAAATATATAGAGAAGATCGACGGTGCGAGCCATTTGTTGATGGGAAAGAGATCGAAGCGGATGAAATCGAACGAGGAAGAACGCGATGAAGTTGGAATTAGGGTTGAGAGAATTCCAGAGCAGAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTGTATGCGTTGAATCGGAAGGCAAATCAAGACAGAGTCAGAATCTGAAGCCGTCTTGCGTTGATTCGGCTGCGGTTTCTTGTCGGAAGTAGAAATTTCGGGGAGAGGGGAAATCGGCGGCTCTGATCGTGGATGATGAAGAGGAATGAATTGAAATTGGTTGCGGATCCGGGTAAGACTGGCCCGATCCAGACTTTTTATTTATATGCATATATATATATATATATATTGCTAATTTTTTGGAATGAATAAAAAAGAGTTGATGGATTGATGAAAATTG

mRNA sequence

ACGCATCAAAAGCCTAAAAGAAAGATTCTCTCGCCTTCACTACTGACCACTAAAGAAAAAACGATGCCGTTTGAGTTGTTTCCAGGGAGTCGGAGTACGGACAGAGGGAAAAGAAAGCGGGGAGACGACGCCGGCGCTGGAAACCAGAAGGACGTTGTGACCAAGGAAGGAAAAGAAGCGGAGACGGCGACGGATGAAGAAGTGGAGGAGTTCTTCTCCATTCTTAAGCGATTACACGCTGCGACGAAATATATAGAGAAGATCGACGGTGCGAGCCATTTGTTGATGGGAAAGAGATCGAAGCGGATGAAATCGAACGAGGAAGAACGCGATGAAGTTGGAATTAGGGTTGAGAGAATTCCAGAGCAGAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTGTATGCGTTGAATCGGAAGGCAAATCAAGACAGAGTCAGAATCTGAAGCCGTCTTGCGTTGATTCGGCTGCGGTTTCTTGTCGGAAGTAGAAATTTCGGGGAGAGGGGAAATCGGCGGCTCTGATCGTGGATGATGAAGAGGAATGAATTGAAATTGGTTGCGGATCCGGGTAAGACTGGCCCGATCCAGACTTTTTATTTATATGCATATATATATATATATATATTGCTAATTTTTTGGAATGAATAAAAAAGAGTTGATGGATTGATGAAAATTG

Coding sequence (CDS)

ATGCCGTTTGAGTTGTTTCCAGGGAGTCGGAGTACGGACAGAGGGAAAAGAAAGCGGGGAGACGACGCCGGCGCTGGAAACCAGAAGGACGTTGTGACCAAGGAAGGAAAAGAAGCGGAGACGGCGACGGATGAAGAAGTGGAGGAGTTCTTCTCCATTCTTAAGCGATTACACGCTGCGACGAAATATATAGAGAAGATCGACGGTGCGAGCCATTTGTTGATGGGAAAGAGATCGAAGCGGATGAAATCGAACGAGGAAGAACGCGATGAAGTTGGAATTAGGGTTGAGAGAATTCCAGAGCAGAAATTGGACAGAAATTTGGATCTGGATCTGAACTTAGAACCTGTATGCGTTGAATCGGAAGGCAAATCAAGACAGAGTCAGAATCTGAAGCCGTCTTGCGTTGATTCGGCTGCGGTTTCTTGTCGGAAGTAG

Protein sequence

MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAATKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVESEGKSRQSQNLKPSCVDSAAVSCRK

Homology

[Close]

BLAST of MELO3C012240 vs. NCBI nr
Match: XP_008446591.1 (PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo] >KAA0034549.1 protein NIM1-INTERACTING 2 [Cucumis melo var. makuwa] >TYK09103.1 protein NIM1-INTERACTING 2 [Cucumis melo var. makuwa])

HSP 1 Score: 279.3 bits (713), Expect = 1.9e-71
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60
           MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA
Sbjct: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60

Query: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120
           TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE
Sbjct: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120

Query: 121 SEGKSRQSQNLKPSCVDSAAVSCRK 146
           SEGKSRQSQNLKPSCVDSAAVSCRK
Sbjct: 121 SEGKSRQSQNLKPSCVDSAAVSCRK 145

[Close]

BLAST of MELO3C012240 vs. NCBI nr
Match: KGN52074.1 (hypothetical protein Csa_008594 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 3.7e-62
Identity = 129/145 (88.97%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60
           MPFELFP SRST+RGKRKRGDDAG GNQKDV  +EG+EAETATDEEVEEFFSILKRLHAA
Sbjct: 1   MPFELFPASRSTERGKRKRGDDAGVGNQKDVGAEEGREAETATDEEVEEFFSILKRLHAA 60

Query: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120
           TKYIEKIDGASHLLMGKR K MKSNEEE DEVGI+ ERIPEQKLDRNLDLDLNLEPVCVE
Sbjct: 61  TKYIEKIDGASHLLMGKRPKPMKSNEEEGDEVGIKAERIPEQKLDRNLDLDLNLEPVCVE 120

Query: 121 SEGKSRQSQNLKPSCVDSAAVSCRK 146
           SEGKSR+ QN KPSCVDSAA SCRK
Sbjct: 121 SEGKSRERQNRKPSCVDSAADSCRK 145

[Close]

BLAST of MELO3C012240 vs. NCBI nr
Match: XP_038892789.1 (protein NIM1-INTERACTING 2 [Benincasa hispida])

HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54
Identity = 117/145 (80.69%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60
           MPFELFP SRSTDRGKRKR DDAG G+Q+D V   GKEAETATDEEVEEFFSILKRLHAA
Sbjct: 1   MPFELFPASRSTDRGKRKREDDAGTGSQRDAVADRGKEAETATDEEVEEFFSILKRLHAA 60

Query: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120
           TKYIEKIDGAS LLMGKRSK  KS+EEE DEV IR E+IP+ KLDRNLDLDLNLEP CVE
Sbjct: 61  TKYIEKIDGASRLLMGKRSKPTKSSEEEADEVEIRAEKIPDHKLDRNLDLDLNLEPACVE 120

Query: 121 SEGKSRQSQNLKPSCVDSAAVSCRK 146
           S+ K+ +SQNLK SC DSAA SCRK
Sbjct: 121 SDDKTSRSQNLKTSCADSAADSCRK 145

[Close]

BLAST of MELO3C012240 vs. NCBI nr
Match: XP_023542001.1 (uncharacterized protein LOC111801981 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-39
Identity = 104/155 (67.10%), Postives = 118/155 (76.13%), Query Frame = 0


Query: 1   MPFELFPGSRSTDRGKRK--RGDD------AGAGNQKDVVTKEGKEAETATDEEVEEFFS 60
           MPFELFP SR TDRGKRK  RG+       A AGNQK+ V + G E E  +DEEVEEFF+
Sbjct: 1   MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFA 60

Query: 61  ILKRLHAATKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDL 120
           ILKRLHAATKYIEKIDGA  LLMGKR+K  K++E+E D V IR +RIP+QKLDRNLDLDL
Sbjct: 61  ILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPDQKLDRNLDLDL 120

Query: 121 NLEPVCVESEGKSRQSQ--NLKPSCVDSAAVSCRK 146
           NLEP CVES+GK R+S+  NLK    DSAA S RK
Sbjct: 121 NLEPTCVESDGKERRSRSHNLKSLTGDSAADSRRK 154

[Close]

BLAST of MELO3C012240 vs. NCBI nr
Match: KAG6573971.1 (hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013028.1 hypothetical protein SDJN02_25784, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-37
Identity = 104/157 (66.24%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 1   MPFELFPGSRSTDRGKRK--RGDD------AGAGNQKDVVTKEGKEAETATDEEVEEFFS 60
           MPFELFP SR TDRGKRK  RG+       A AGNQK+ V + G E E  +DEEVEEFF+
Sbjct: 1   MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNEREMTSDEEVEEFFA 60

Query: 61  ILKRLHAATKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRN--LDL 120
           ILKRLHAATKYIEKIDGA  LLMGKR+K  K++E+E D V IR +RIPEQKLDRN  LDL
Sbjct: 61  ILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPEQKLDRNLDLDL 120

Query: 121 DLNLEPVCVESEGKSRQSQ--NLKPSCVDSAAVSCRK 146
           DLNLEP  VES+GK R+S+  NLK    DSAA S RK
Sbjct: 121 DLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK 156

[Close]

BLAST of MELO3C012240 vs. ExPASy TrEMBL
Match: A0A5A7SZN6 (Protein NIM1-INTERACTING 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00930 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 9.4e-72
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60
           MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA
Sbjct: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60

Query: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120
           TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE
Sbjct: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120

Query: 121 SEGKSRQSQNLKPSCVDSAAVSCRK 146
           SEGKSRQSQNLKPSCVDSAAVSCRK
Sbjct: 121 SEGKSRQSQNLKPSCVDSAAVSCRK 145

[Close]

BLAST of MELO3C012240 vs. ExPASy TrEMBL
Match: A0A1S3BFE7 (protein NIM1-INTERACTING 2 OS=Cucumis melo OX=3656 GN=LOC103489277 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 9.4e-72
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60
           MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA
Sbjct: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60

Query: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120
           TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE
Sbjct: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120

Query: 121 SEGKSRQSQNLKPSCVDSAAVSCRK 146
           SEGKSRQSQNLKPSCVDSAAVSCRK
Sbjct: 121 SEGKSRQSQNLKPSCVDSAAVSCRK 145

[Close]

BLAST of MELO3C012240 vs. ExPASy TrEMBL
Match: A0A0A0KT67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609110 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.8e-62
Identity = 129/145 (88.97%), Postives = 134/145 (92.41%), Query Frame = 0


Query: 1   MPFELFPGSRSTDRGKRKRGDDAGAGNQKDVVTKEGKEAETATDEEVEEFFSILKRLHAA 60
           MPFELFP SRST+RGKRKRGDDAG GNQKDV  +EG+EAETATDEEVEEFFSILKRLHAA
Sbjct: 1   MPFELFPASRSTERGKRKRGDDAGVGNQKDVGAEEGREAETATDEEVEEFFSILKRLHAA 60

Query: 61  TKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLDLNLEPVCVE 120
           TKYIEKIDGASHLLMGKR K MKSNEEE DEVGI+ ERIPEQKLDRNLDLDLNLEPVCVE
Sbjct: 61  TKYIEKIDGASHLLMGKRPKPMKSNEEEGDEVGIKAERIPEQKLDRNLDLDLNLEPVCVE 120

Query: 121 SEGKSRQSQNLKPSCVDSAAVSCRK 146
           SEGKSR+ QN KPSCVDSAA SCRK
Sbjct: 121 SEGKSRERQNRKPSCVDSAADSCRK 145

[Close]

BLAST of MELO3C012240 vs. ExPASy TrEMBL
Match: A0A6J1FZ89 (uncharacterized protein LOC111449260 OS=Cucurbita moschata OX=3662 GN=LOC111449260 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.6e-37
Identity = 103/157 (65.61%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 1   MPFELFPGSRSTDRGKRK--RGDD------AGAGNQKDVVTKEGKEAETATDEEVEEFFS 60
           MPFELFP SR TDRGKRK  RG+       A AGNQK+ V + G E +  +DEEVEEFF+
Sbjct: 1   MPFELFPSSR-TDRGKRKRERGEHADYDAAAAAGNQKETVAERGNERQMTSDEEVEEFFA 60

Query: 61  ILKRLHAATKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRN--LDL 120
           ILKRLHAATKYIEKIDGA  LLMGKR+K  K++E+E D V IR +RIPEQKLDRN  LDL
Sbjct: 61  ILKRLHAATKYIEKIDGARSLLMGKRAKTAKASEKEGDGVEIRTKRIPEQKLDRNLDLDL 120

Query: 121 DLNLEPVCVESEGKSRQSQ--NLKPSCVDSAAVSCRK 146
           DLNLEP  VES+GK R+S+  NLK    DSAA S RK
Sbjct: 121 DLNLEPASVESDGKERRSRSHNLKSLTDDSAADSRRK 156

[Close]

BLAST of MELO3C012240 vs. ExPASy TrEMBL
Match: A0A6J1HXL3 (uncharacterized protein LOC111467566 OS=Cucurbita maxima OX=3661 GN=LOC111467566 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.8e-31
Identity = 92/154 (59.74%), Postives = 103/154 (66.88%), Query Frame = 0


Query: 1   MPFELFPGSRSTDRGKRKR---------GDDAGAGNQKDVVTKEGKEAETATDEEVEEFF 60
           MPFELFP SR+ DRGKRKR            A AGNQK  V   GKE E  +DEEVEEFF
Sbjct: 1   MPFELFPSSRA-DRGKRKRERGEHADYEAAAADAGNQKKTVADRGKEREMTSDEEVEEFF 60

Query: 61  SILKRLHAATKYIEKIDGASHLLMGKRSKRMKSNEEERDEVGIRVERIPEQKLDRNLDLD 120
           +ILKRLHAATKYIEKIDGA   LMGKR+K  K++E+E D V IR +RIPEQKLDRNLDLD
Sbjct: 61  TILKRLHAATKYIEKIDGARSFLMGKRAKTAKASEKEGDGVEIRTKRIPEQKLDRNLDLD 120

Query: 121 LNLEPVCVESEGKSRQSQNLKPSCVDSAAVSCRK 146
           L+L               NL+P+  DSAA S RK
Sbjct: 121 LDL---------------NLEPASDDSAADSRRK 138

The following BLAST results are available for this feature:

BLAST of MELO3C012240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446591.1	1.9e-71	100.00	PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo] >KAA0034549.1 protein NIM1-...	[more]
KGN52074.1	3.7e-62	88.97	hypothetical protein Csa_008594 [Cucumis sativus]	[more]
XP_038892789.1	2.2e-54	80.69	protein NIM1-INTERACTING 2 [Benincasa hispida]	[more]
XP_023542001.1	1.2e-39	67.10	uncharacterized protein LOC111801981 [Cucurbita pepo subsp. pepo]	[more]
KAG6573971.1	2.4e-37	66.24	hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MELO3C012240 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C012240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SZN6	9.4e-72	100.00	Protein NIM1-INTERACTING 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BFE7	9.4e-72	100.00	protein NIM1-INTERACTING 2 OS=Cucumis melo OX=3656 GN=LOC103489277 PE=4 SV=1	[more]
A0A0A0KT67	1.8e-62	88.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609110 PE=4 SV=1	[more]
A0A6J1FZ89	2.6e-37	65.61	uncharacterized protein LOC111449260 OS=Cucurbita moschata OX=3662 GN=LOC1114492...	[more]
A0A6J1HXL3	2.8e-31	59.74	uncharacterized protein LOC111467566 OS=Cucurbita maxima OX=3661 GN=LOC111467566...	[more]

BLAST of MELO3C012240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	PANTHER	PTHR35735:SF8	PROTEIN NIM1-INTERACTING 2	coord: 14..124
IPR034577	Protein NIM1-INTERACTING 2	PANTHER	PTHR35735	PROTEIN NIM1-INTERACTING 2	coord: 14..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012240.1	MELO3C012240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010112	regulation of systemic acquired resistance