MELO3C011942 (gene) Melon (DHL92) v4

Overview
NameMELO3C011942
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRING-type domain-containing protein
Locationchr10: 3728348 .. 3729098 (-)
RNA-Seq ExpressionMELO3C011942
SyntenyMELO3C011942
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATACATATTTGCAGTTTGGGCTCCTTTTTTTGGCCTTTTCCTTCTTATTAAGCCTCAAAACCTATTTCTTCATTTTCTCTACCTTCAACCAAAAAAACCCTGAAACAGATTAGAACAACAAAAAGAGAAAAGGAAAAAAGTTCAAATTTTGAGGTGTTTTTTGAAGATGGGTCTCTCAAATTTTCCTCCTTCAGCTGAAGGAGTGTTGCTGTTACCAGTTTTAGTGATGCACACTGTAATGTCAATGGCGTTTTTGAAGAATTTTGTGAGATCTGTCATACAAATGATGAGTGCCAGTGGGAATTCTTCGAGTTCTGAAGAAGAATACGATTGGGAAAATGGAAGAGAAAGAAGGATTTCAATTACTCAGTTCAAAACTTTGGGGCAAAGCTTCAATGGCGAAACAGAGGAGGAGTTTGTTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGTAAGCATTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGTCCTCTTTGTCGCTCTATCGAATAACGTTTTTCAACAATTTTAGGGTTTTTTTCTTTTTAATTTCTCTCTCTCTCTCTCTTCCTATTTTATTTTGAGTGAAAGAGGATGAAGTTTTGTAACTGATAAGTGATATATAATTAAATTCACTATACCCATCGTAAGTTTTTGGGTACTGGTGATTTATGTTCAAA

mRNA sequence

CATACATATTTGCAGTTTGGGCTCCTTTTTTTGGCCTTTTCCTTCTTATTAAGCCTCAAAACCTATTTCTTCATTTTCTCTACCTTCAACCAAAAAAACCCTGAAACAGATTAGAACAACAAAAAGAGAAAAGGAAAAAAGTTCAAATTTTGAGGTGTTTTTTGAAGATGGGTCTCTCAAATTTTCCTCCTTCAGCTGAAGGAGTGTTGCTGTTACCAGTTTTAGTGATGCACACTGTAATGTCAATGGCGTTTTTGAAGAATTTTGTGAGATCTGTCATACAAATGATGAGTGCCAGTGGGAATTCTTCGAGTTCTGAAGAAGAATACGATTGGGAAAATGGAAGAGAAAGAAGGATTTCAATTACTCAGTTCAAAACTTTGGGGCAAAGCTTCAATGGCGAAACAGAGGAGGAGTTTGTTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGTAAGCATTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGTCCTCTTTGTCGCTCTATCGAATAACGTTTTTCAACAATTTTAGGGTTTTTTTCTTTTTAATTTCTCTCTCTCTCTCTCTTCCTATTTTATTTTGAGTGAAAGAGGATGAAGTTTTGTAACTGATAAGTGATATATAATTAAATTCACTATACCCATCGTAAGTTTTTGGGTACTGGTGATTTATGTTCAAA

Coding sequence (CDS)

ATGGGTCTCTCAAATTTTCCTCCTTCAGCTGAAGGAGTGTTGCTGTTACCAGTTTTAGTGATGCACACTGTAATGTCAATGGCGTTTTTGAAGAATTTTGTGAGATCTGTCATACAAATGATGAGTGCCAGTGGGAATTCTTCGAGTTCTGAAGAAGAATACGATTGGGAAAATGGAAGAGAAAGAAGGATTTCAATTACTCAGTTCAAAACTTTGGGGCAAAGCTTCAATGGCGAAACAGAGGAGGAGTTTGTTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGTAAGCATTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGTCCTCTTTGTCGCTCTATCGAATAA

Protein sequence

MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCRSIE
Homology
BLAST of MELO3C011942 vs. NCBI nr
Match: KAA0034267.1 (putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa] >TYK15653.1 putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa])

HSP 1 Score: 284.6 bits (727), Expect = 4.4e-73
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60

Query: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120
           ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL
Sbjct: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120

Query: 121 SKWFDNKHFTCPLCRSIE 139
           SKWFDNKHFTCPLCRSIE
Sbjct: 121 SKWFDNKHFTCPLCRSIE 138

BLAST of MELO3C011942 vs. NCBI nr
Match: XP_011655602.1 (probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 2.4e-71
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWEN R
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRR 60

Query: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120
           ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL
Sbjct: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120

Query: 121 SKWFDNKHFTCPLCRSIE 139
           SKWFDNKHFTCPLCRSIE
Sbjct: 121 SKWFDNKHFTCPLCRSIE 138

BLAST of MELO3C011942 vs. NCBI nr
Match: XP_038892017.1 (probable E3 ubiquitin-protein ligase XERICO [Benincasa hispida])

HSP 1 Score: 260.8 bits (665), Expect = 6.8e-66
Identity = 130/139 (93.53%), Postives = 135/139 (97.12%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKNFVRSVIQMMSASGN+SSSEEEYDWENGR
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNTSSSEEEYDWENGR 60

Query: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120
           ERRISITQFK+LGQSFNGETE+  VSRCVMAECCVCLC FEADEEVSELSCKH+FHKACL
Sbjct: 61  ERRISITQFKSLGQSFNGETEDS-VSRCVMAECCVCLCGFEADEEVSELSCKHYFHKACL 120

Query: 121 SKWFD-NKHFTCPLCRSIE 139
           SKWFD NKHFTCPLCRSIE
Sbjct: 121 SKWFDNNKHFTCPLCRSIE 138

BLAST of MELO3C011942 vs. NCBI nr
Match: XP_022984317.1 (probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima])

HSP 1 Score: 253.1 bits (645), Expect = 1.4e-63
Identity = 125/139 (89.93%), Postives = 130/139 (93.53%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKN VRSVIQMMSASGN SSSEEE+DWENGR
Sbjct: 43  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGR 102

Query: 61  ERRISITQFKTLGQSF-NGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKAC 120
           ERRISITQFK+LGQSF NG TE+   SRC+MAECCVCLC FEADEEVSELSCKHFFHKAC
Sbjct: 103 ERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEVSELSCKHFFHKAC 162

Query: 121 LSKWFDNKHFTCPLCRSIE 139
           LSKWFDNKH TCPLCRSIE
Sbjct: 163 LSKWFDNKHITCPLCRSIE 181

BLAST of MELO3C011942 vs. NCBI nr
Match: KAG6601543.1 (putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032315.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.9 bits (642), Expect = 3.2e-63
Identity = 126/139 (90.65%), Postives = 129/139 (92.81%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKN VRSVIQMMSASGN SSSEEE DWENGR
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGR 60

Query: 61  ERRISITQFKTLGQSF-NGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKAC 120
           ERRISITQFK+LGQSF NG TE+   SRCVMAECCVCLC FEADEEVSELSCKHFFHKAC
Sbjct: 61  ERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCGFEADEEVSELSCKHFFHKAC 120

Query: 121 LSKWFDNKHFTCPLCRSIE 139
           LSKWFDNKH TCPLCRSIE
Sbjct: 121 LSKWFDNKHITCPLCRSIE 139

BLAST of MELO3C011942 vs. ExPASy Swiss-Prot
Match: Q9SI09 (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-15
Identity = 52/148 (35.14%), Postives = 79/148 (53.38%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSAS---GNSSSSEEEYDWE 60
           MGLS+ P  +EG+L   V++++T +S++ +K  VRS + ++  S    +SS S      E
Sbjct: 1   MGLSSLPGPSEGMLC--VILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSE 60

Query: 61  NGRERR---ISITQFKTLGQSFNGETEE---EFVSRCVMA---ECCVCLCRFEADEEVSE 120
           N          + Q ++  + F   T     E + RC      EC VCL +F+ D E+++
Sbjct: 61  NSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINK 120

Query: 121 LSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           L C H FHK CL KW D  + TCPLCR+
Sbjct: 121 LKCGHLFHKTCLEKWIDYWNITCPLCRT 146

BLAST of MELO3C011942 vs. ExPASy Swiss-Prot
Match: Q9ZU51 (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0

Query: 91  AECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           ++C VCL + +  EEV +L C+H FHK CL  W  + +F CPLCRS
Sbjct: 72  SDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRS 117

BLAST of MELO3C011942 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07
Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0

Query: 91  AECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCR 136
           AECC+CLC +E   E+ EL C H FH  C+ KW  + +  CPLC+
Sbjct: 336 AECCICLCEYEDGVELRELPCNHHFHCTCIDKWL-HINSRCPLCK 379

BLAST of MELO3C011942 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.7e-07
Identity = 37/135 (27.41%), Postives = 63/135 (46.67%), Query Frame = 0

Query: 14  LLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGRERRISITQFKTLG 73
           + LP L + T+  + F++  V S+ + +   G S   E +  W +       I + ++  
Sbjct: 10  VFLPKLFVQTLSILGFIRTIVFSIFRFL---GLSDFLEMDQTWPDYTSYPTRIPETRS-- 69

Query: 74  QSFNGETEEEFVSRCVMAE-----------CCVCLCRFEADEEVSEL-SCKHFFHKACLS 133
             F+     E +      E           C VCL  FE ++E+  L +C+H FH++CL 
Sbjct: 70  -PFSALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLD 129

Query: 134 KWFDNKHFTCPLCRS 137
           +W D+   TCPLCR+
Sbjct: 130 RWMDHDQKTCPLCRT 138

BLAST of MELO3C011942 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0

Query: 91  AECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCR 136
           AECC+CL  +E + E+ EL C H FH  C+ KW    + TCPLC+
Sbjct: 323 AECCICLSAYEDETELRELPCGHHFHCGCVDKWL-YINATCPLCK 366

BLAST of MELO3C011942 vs. ExPASy TrEMBL
Match: A0A5A7SYA9 (Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001500 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.1e-73
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60

Query: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120
           ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL
Sbjct: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120

Query: 121 SKWFDNKHFTCPLCRSIE 139
           SKWFDNKHFTCPLCRSIE
Sbjct: 121 SKWFDNKHFTCPLCRSIE 138

BLAST of MELO3C011942 vs. ExPASy TrEMBL
Match: A0A0A0KTI8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G598060 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWEN R
Sbjct: 1   MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENRR 60

Query: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120
           ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL
Sbjct: 61  ERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACL 120

Query: 121 SKWFDNKHFTCPLCRSIE 139
           SKWFDNKHFTCPLCRSIE
Sbjct: 121 SKWFDNKHFTCPLCRSIE 138

BLAST of MELO3C011942 vs. ExPASy TrEMBL
Match: A0A6J1J1V9 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita maxima OX=3661 GN=LOC111482652 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 6.9e-64
Identity = 125/139 (89.93%), Postives = 130/139 (93.53%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKN VRSVIQMMSASGN SSSEEE+DWENGR
Sbjct: 43  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGR 102

Query: 61  ERRISITQFKTLGQSF-NGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKAC 120
           ERRISITQFK+LGQSF NG TE+   SRC+MAECCVCLC FEADEEVSELSCKHFFHKAC
Sbjct: 103 ERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEVSELSCKHFFHKAC 162

Query: 121 LSKWFDNKHFTCPLCRSIE 139
           LSKWFDNKH TCPLCRSIE
Sbjct: 163 LSKWFDNKHITCPLCRSIE 181

BLAST of MELO3C011942 vs. ExPASy TrEMBL
Match: A0A6J1GZI7 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC111458569 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.5e-63
Identity = 126/139 (90.65%), Postives = 129/139 (92.81%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGR 60
           MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKN VRSVIQMMSASGN SSSEEE DWENGR
Sbjct: 75  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGR 134

Query: 61  ERRISITQFKTLGQSF-NGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKAC 120
           ERRISITQFK+LGQSF NG TE+   SRCVMAECCVCLC FEADEEVSELSCKHFFHKAC
Sbjct: 135 ERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCGFEADEEVSELSCKHFFHKAC 194

Query: 121 LSKWFDNKHFTCPLCRSIE 139
           LSKWFDNKH TCPLCRSIE
Sbjct: 195 LSKWFDNKHITCPLCRSIE 213

BLAST of MELO3C011942 vs. ExPASy TrEMBL
Match: A0A6J1DFU2 (probable E3 ubiquitin-protein ligase XERICO OS=Momordica charantia OX=3673 GN=LOC111019714 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.3e-58
Identity = 117/140 (83.57%), Postives = 126/140 (90.00%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNS--SSSEEEYDWEN 60
           MGLSNFPP AEGVLLLPVL+M+TVMSMAFLK+ VRSVIQMMSASG++  SSSEEEYD EN
Sbjct: 1   MGLSNFPPPAEGVLLLPVLLMNTVMSMAFLKSLVRSVIQMMSASGSASPSSSEEEYDSEN 60

Query: 61  GRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKA 120
            RERRISITQFK+L QSFNG TE+   SRC+ AECCVCLC FEADEEVSELSCKHFFHKA
Sbjct: 61  ARERRISITQFKSLRQSFNGGTEDGSASRCIAAECCVCLCGFEADEEVSELSCKHFFHKA 120

Query: 121 CLSKWFDNKHFTCPLCRSIE 139
           CLSKWFDNKH TCPLCRSI+
Sbjct: 121 CLSKWFDNKHITCPLCRSIQ 140

BLAST of MELO3C011942 vs. TAIR 10
Match: AT1G67856.1 (RING/U-box superfamily protein )

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-32
Identity = 72/140 (51.43%), Postives = 101/140 (72.14%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSS-SSEEEYDWENG 60
           MG+S++P ++EGV  +P+LVM+TV+S++ +KN VRSV+ M+S+  N + + E++ D E+ 
Sbjct: 1   MGISHYPTASEGV--MPMLVMNTVVSVSLVKNMVRSVVNMVSSETNEARNKEDDQDHEDS 60

Query: 61  -RERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSEL-SCKHFFHK 120
            R RRISIT F++L ++     E E +      +CCVCLC F+ +EEVSEL SCKH+FH 
Sbjct: 61  KRRRRISITHFESLCENRGSRNEREAM------DCCVCLCGFKEEEEVSELVSCKHYFHS 120

Query: 121 ACLSKWFDNKHFTCPLCRSI 138
           ACL KWF N H TCPLCRSI
Sbjct: 121 ACLDKWFGNNHTTCPLCRSI 132

BLAST of MELO3C011942 vs. TAIR 10
Match: AT1G24580.1 (RING/U-box superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 6.0e-28
Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 0

Query: 21  MHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGRERRISITQFKTLGQSFNGET 80
           M+TV+S+  LKN VRSV Q++++   SS   ++   ++   RRISITQFK+L ++   E 
Sbjct: 1   MNTVVSITLLKNMVRSVFQIVASETESSMEIDDEPEDDFVTRRISITQFKSLCENIEEEE 60

Query: 81  EEEFVSRCVMAECCVCLCRFEADEEVSEL-SCKHFFHKACLSKWFDNKHFTCPLCRSI 138
           EE+ V      ECCVCLC F+ +EEVSEL SCKHFFH+ACL  WF N H TCPLCRSI
Sbjct: 61  EEKGV------ECCVCLCGFKEEEEVSELVSCKHFFHRACLDNWFGNNHTTCPLCRSI 112

BLAST of MELO3C011942 vs. TAIR 10
Match: AT2G04240.1 (RING/U-box superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16
Identity = 52/148 (35.14%), Postives = 79/148 (53.38%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSAS---GNSSSSEEEYDWE 60
           MGLS+ P  +EG+L   V++++T +S++ +K  VRS + ++  S    +SS S      E
Sbjct: 1   MGLSSLPGPSEGMLC--VILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSE 60

Query: 61  NGRERR---ISITQFKTLGQSFNGETEE---EFVSRCVMA---ECCVCLCRFEADEEVSE 120
           N          + Q ++  + F   T     E + RC      EC VCL +F+ D E+++
Sbjct: 61  NSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINK 120

Query: 121 LSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           L C H FHK CL KW D  + TCPLCR+
Sbjct: 121 LKCGHLFHKTCLEKWIDYWNITCPLCRT 146

BLAST of MELO3C011942 vs. TAIR 10
Match: AT2G04240.2 (RING/U-box superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16
Identity = 52/148 (35.14%), Postives = 79/148 (53.38%), Query Frame = 0

Query: 1   MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSAS---GNSSSSEEEYDWE 60
           MGLS+ P  +EG+L   V++++T +S++ +K  VRS + ++  S    +SS S      E
Sbjct: 1   MGLSSLPGPSEGMLC--VILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSE 60

Query: 61  NGRERR---ISITQFKTLGQSFNGETEE---EFVSRCVMA---ECCVCLCRFEADEEVSE 120
           N          + Q ++  + F   T     E + RC      EC VCL +F+ D E+++
Sbjct: 61  NSSTSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINK 120

Query: 121 LSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           L C H FHK CL KW D  + TCPLCR+
Sbjct: 121 LKCGHLFHKTCLEKWIDYWNITCPLCRT 146

BLAST of MELO3C011942 vs. TAIR 10
Match: AT2G01150.1 (RING-H2 finger protein 2B )

HSP 1 Score: 61.2 bits (147), Expect = 7.4e-10
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0

Query: 91  AECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCRS 137
           ++C VCL + +  EEV +L C+H FHK CL  W  + +F CPLCRS
Sbjct: 72  SDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRS 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0034267.14.4e-73100.00putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa] >TYK15653... [more]
XP_011655602.12.4e-7198.55probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus][more]
XP_038892017.16.8e-6693.53probable E3 ubiquitin-protein ligase XERICO [Benincasa hispida][more]
XP_022984317.11.4e-6389.93probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima][more]
KAG6601543.13.2e-6390.65putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
Q9SI092.6e-1535.14Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=X... [more]
Q9ZU511.0e-0850.00E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 ... [more]
Q93Z922.6e-0748.89E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116... [more]
Q9XF925.7e-0727.41Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH... [more]
Q8LDB81.7e-0648.89E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631... [more]
Match NameE-valueIdentityDescription
A0A5A7SYA92.1e-73100.00Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0KTI81.2e-7198.55RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G598060 P... [more]
A0A6J1J1V96.9e-6489.93probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1GZI71.5e-6390.65probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1DFU23.3e-5883.57probable E3 ubiquitin-protein ligase XERICO OS=Momordica charantia OX=3673 GN=LO... [more]
Match NameE-valueIdentityDescription
AT1G67856.11.1e-3251.43RING/U-box superfamily protein [more]
AT1G24580.16.0e-2854.24RING/U-box superfamily protein [more]
AT2G04240.11.8e-1635.14RING/U-box superfamily protein [more]
AT2G04240.21.8e-1635.14RING/U-box superfamily protein [more]
AT2G01150.17.4e-1050.00RING-H2 finger protein 2B [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 93..134
e-value: 2.9E-4
score: 30.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 92..135
e-value: 5.1E-11
score: 42.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 93..135
score: 12.149959
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 70..137
e-value: 4.8E-15
score: 56.6
NoneNo IPR availablePANTHERPTHR47258:SF3F21J9.24-RELATEDcoord: 1..137
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 92..136
IPR044249Probable E3 ubiquitin-protein ligase XERICO-likePANTHERPTHR47258FAMILY NOT NAMEDcoord: 1..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011942.1MELO3C011942.1mRNA