MELO3C011942 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATACATATTTGCAGTTTGGGCTCCTTTTTTTGGCCTTTTCCTTCTTATTAAGCCTCAAAACCTATTTCTTCATTTTCTCTACCTTCAACCAAAAAAACCCTGAAACAGATTAGAACAACAAAAAGAGAAAAGGAAAAAAGTTCAAATTTTGAGGTGTTTTTTGAAGATGGGTCTCTCAAATTTTCCTCCTTCAGCTGAAGGAGTGTTGCTGTTACCAGTTTTAGTGATGCACACTGTAATGTCAATGGCGTTTTTGAAGAATTTTGTGAGATCTGTCATACAAATGATGAGTGCCAGTGGGAATTCTTCGAGTTCTGAAGAAGAATACGATTGGGAAAATGGAAGAGAAAGAAGGATTTCAATTACTCAGTTCAAAACTTTGGGGCAAAGCTTCAATGGCGAAACAGAGGAGGAGTTTGTTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGTAAGCATTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGTCCTCTTTGTCGCTCTATCGAATAACGTTTTTCAACAATTTTAGGGTTTTTTTCTTTTTAATTTCTCTCTCTCTCTCTCTTCCTATTTTATTTTGAGTGAAAGAGGATGAAGTTTTGTAACTGATAAGTGATATATAATTAAATTCACTATACCCATCGTAAGTTTTTGGGTACTGGTGATTTATGTTCAAA CATACATATTTGCAGTTTGGGCTCCTTTTTTTGGCCTTTTCCTTCTTATTAAGCCTCAAAACCTATTTCTTCATTTTCTCTACCTTCAACCAAAAAAACCCTGAAACAGATTAGAACAACAAAAAGAGAAAAGGAAAAAAGTTCAAATTTTGAGGTGTTTTTTGAAGATGGGTCTCTCAAATTTTCCTCCTTCAGCTGAAGGAGTGTTGCTGTTACCAGTTTTAGTGATGCACACTGTAATGTCAATGGCGTTTTTGAAGAATTTTGTGAGATCTGTCATACAAATGATGAGTGCCAGTGGGAATTCTTCGAGTTCTGAAGAAGAATACGATTGGGAAAATGGAAGAGAAAGAAGGATTTCAATTACTCAGTTCAAAACTTTGGGGCAAAGCTTCAATGGCGAAACAGAGGAGGAGTTTGTTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGTAAGCATTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGTCCTCTTTGTCGCTCTATCGAATAACGTTTTTCAACAATTTTAGGGTTTTTTTCTTTTTAATTTCTCTCTCTCTCTCTCTTCCTATTTTATTTTGAGTGAAAGAGGATGAAGTTTTGTAACTGATAAGTGATATATAATTAAATTCACTATACCCATCGTAAGTTTTTGGGTACTGGTGATTTATGTTCAAA ATGGGTCTCTCAAATTTTCCTCCTTCAGCTGAAGGAGTGTTGCTGTTACCAGTTTTAGTGATGCACACTGTAATGTCAATGGCGTTTTTGAAGAATTTTGTGAGATCTGTCATACAAATGATGAGTGCCAGTGGGAATTCTTCGAGTTCTGAAGAAGAATACGATTGGGAAAATGGAAGAGAAAGAAGGATTTCAATTACTCAGTTCAAAACTTTGGGGCAAAGCTTCAATGGCGAAACAGAGGAGGAGTTTGTTTCGAGGTGTGTTATGGCAGAGTGTTGTGTTTGTCTTTGTAGGTTTGAAGCTGATGAAGAAGTTAGTGAGTTGTCTTGTAAGCATTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACTTTACTTGTCCTCTTTGTCGCTCTATCGAATAA MGLSNFPPSAEGVLLLPVLVMHTVMSMAFLKNFVRSVIQMMSASGNSSSSEEEYDWENGRERRISITQFKTLGQSFNGETEEEFVSRCVMAECCVCLCRFEADEEVSELSCKHFFHKACLSKWFDNKHFTCPLCRSIE Homology
BLAST of MELO3C011942 vs. NCBI nr
Match: KAA0034267.1 (putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa] >TYK15653.1 putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa]) HSP 1 Score: 284.6 bits (727), Expect = 4.4e-73 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of MELO3C011942 vs. NCBI nr
Match: XP_011655602.1 (probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus]) HSP 1 Score: 278.9 bits (712), Expect = 2.4e-71 Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0
BLAST of MELO3C011942 vs. NCBI nr
Match: XP_038892017.1 (probable E3 ubiquitin-protein ligase XERICO [Benincasa hispida]) HSP 1 Score: 260.8 bits (665), Expect = 6.8e-66 Identity = 130/139 (93.53%), Postives = 135/139 (97.12%), Query Frame = 0
BLAST of MELO3C011942 vs. NCBI nr
Match: XP_022984317.1 (probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima]) HSP 1 Score: 253.1 bits (645), Expect = 1.4e-63 Identity = 125/139 (89.93%), Postives = 130/139 (93.53%), Query Frame = 0
BLAST of MELO3C011942 vs. NCBI nr
Match: KAG6601543.1 (putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032315.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 251.9 bits (642), Expect = 3.2e-63 Identity = 126/139 (90.65%), Postives = 129/139 (92.81%), Query Frame = 0
BLAST of MELO3C011942 vs. ExPASy Swiss-Prot
Match: Q9SI09 (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.6e-15 Identity = 52/148 (35.14%), Postives = 79/148 (53.38%), Query Frame = 0
BLAST of MELO3C011942 vs. ExPASy Swiss-Prot
Match: Q9ZU51 (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 1.0e-08 Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0
BLAST of MELO3C011942 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07 Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0
BLAST of MELO3C011942 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 5.7e-07 Identity = 37/135 (27.41%), Postives = 63/135 (46.67%), Query Frame = 0
BLAST of MELO3C011942 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06 Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0
BLAST of MELO3C011942 vs. ExPASy TrEMBL
Match: A0A5A7SYA9 (Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001500 PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.1e-73 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of MELO3C011942 vs. ExPASy TrEMBL
Match: A0A0A0KTI8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G598060 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71 Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0
BLAST of MELO3C011942 vs. ExPASy TrEMBL
Match: A0A6J1J1V9 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita maxima OX=3661 GN=LOC111482652 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 6.9e-64 Identity = 125/139 (89.93%), Postives = 130/139 (93.53%), Query Frame = 0
BLAST of MELO3C011942 vs. ExPASy TrEMBL
Match: A0A6J1GZI7 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC111458569 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.5e-63 Identity = 126/139 (90.65%), Postives = 129/139 (92.81%), Query Frame = 0
BLAST of MELO3C011942 vs. ExPASy TrEMBL
Match: A0A6J1DFU2 (probable E3 ubiquitin-protein ligase XERICO OS=Momordica charantia OX=3673 GN=LOC111019714 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 3.3e-58 Identity = 117/140 (83.57%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of MELO3C011942 vs. TAIR 10
Match: AT1G67856.1 (RING/U-box superfamily protein ) HSP 1 Score: 137.1 bits (344), Expect = 1.1e-32 Identity = 72/140 (51.43%), Postives = 101/140 (72.14%), Query Frame = 0
BLAST of MELO3C011942 vs. TAIR 10
Match: AT1G24580.1 (RING/U-box superfamily protein ) HSP 1 Score: 121.3 bits (303), Expect = 6.0e-28 Identity = 64/118 (54.24%), Postives = 82/118 (69.49%), Query Frame = 0
BLAST of MELO3C011942 vs. TAIR 10
Match: AT2G04240.1 (RING/U-box superfamily protein ) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16 Identity = 52/148 (35.14%), Postives = 79/148 (53.38%), Query Frame = 0
BLAST of MELO3C011942 vs. TAIR 10
Match: AT2G04240.2 (RING/U-box superfamily protein ) HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16 Identity = 52/148 (35.14%), Postives = 79/148 (53.38%), Query Frame = 0
BLAST of MELO3C011942 vs. TAIR 10
Match: AT2G01150.1 (RING-H2 finger protein 2B ) HSP 1 Score: 61.2 bits (147), Expect = 7.4e-10 Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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