MELO3C011878 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACTTCTTTTCCTTTTCCTTTTCCTTTTCCTCTCTTCCCATTGAAATGTAAACCCCAGACCATTTTAACAAAACAATCTTCCTGTTCCTCTTCATCTTTATATCATCGATGTTAGACGATCTCGGCAGTGGACATTTTTAGGCCATTTGTTTCTGTCCGACGGCAATCATGGGAAATTGTGTTCTTGTTCGTAGAGACCAGAAACCTGATTCTAAATTCAAATGGTCGGTCGGTTCTGGGACCGTCGTCAATGTTAATGTTTCGAGCAATGAATCCGACAACAAACCCGAGGTTTGGGAAAAGGAGATCATAGGAAGGCTTTGTTCTAGCCCTCGTCTCTCTTCACATCTACAACCCTCTTCTCCACCATTCGGTTTGAGTCCTCGCCCTCTCCTTTTCTCTTTTGATTTGTTTTTGTTTTCTTTTCCTTTCTAATTTATTGTTTAAGTTTTGGAATTACTGCCTTCCTCTTTGATGATCATGATTCTACATTTTAAAAGATAGAGAATGACTTATGATTTAATTTATATTTCTAAATTTGTATGAAACAAATATATATAAAACTTATAAATGTATTAGTTAAACACTTAAATTTTCATAAGTCAATCAATTTAGATTTTTAGACAAAATTTTCTCTTAAAAACTATTTTTGTATTTAGTTTAATTTGTCACACCGACATTTAAATAAATTTGTACACGTTGAGAATTAAATAATCAATTAATTTATAATTTACAGTATTTTCAAAAATAGCAAAATGAACTTAAATGTTTATAAAATATAACAAAATTTCAAATATTTCAATTAGGCTAATAGTATTTATCAGCTATATGGATAGACGTAGATAGAAATATTAAAGTATATCACTACCTATCGTTGATGAAATATAAAATATTACCATATTGTGTAAATATTTTTAATAGTTTTATCATTTATTATTATAATTTAAGCAGACACGTTCAAATGGATATATAGTGAAATTTGGTGGATAGGTTTATGTTTAAGGTGTAATTTTTTACGTTTTTTGAAATGGTTTAAAAAAATTATTTGAATGTTCATAAGTATTTCCAAACATGTTGCTCTTGTTTTTGCTCTTAGTCTCTTCTGTTCATGTTTGATTTTATATTTTCAAAAGTAATTTCTTATCATACCATTTTGATCGTTTGATTGTTGTGTTAATGTAGGTAAAGGCGACGAGATATTTTTTGATTCACAAGCTTGGTTGGATTCTGACAACGATGATTTCTTCAGCGTCAACGGAGGTTAGAATTATAAACAATTGGCAATTTTAATTAGTTAATGGAGATTAGAATTTACTATGAACATGGTAACAAATTTTATGAAATTTATTGCATCCGCACTAAATTGATCTAGACTTACTTGTGTTTATAAACTCAAAATACTATCTTGAAATTCAATAAAAAATATCAAATGATAATAGTTATCATGAATTTATTAAATTGTTAACTACAAATTTAAGAGTTCTCAAATCGAAAATGATATCTAAAAGTACGTTATACTAAGGAGTTTTTCAAAAATAGAAAAAGTTTATAAATTATATTTAGAAAAAGTTTATAAGTATAATAAAATTTATTATACTTATTTTTCTATGAAGTGTAAATATTTTGTCAAATGTTCTATTTTTAACAATTTTTCTTATATTAACTATTTAGTTTTTAGTTTTTGAAATGAATTAATTTATAAACATCATTTCTATCCAATTGATTTTTTATTTGTTGTTTTTATATTTTAAAAGTTAAAACATGTTTGATAGTAATTTGGTGTAAGGCTTTGTTTTTTTTTTAAATAATTTTGGTTCTTTTCGAGCATATTTTTTAATAGAATATTTTCCAATATAATAAAGTAAATTAAAAAATATATATATATATATATATATATATATATATATATATAAATATAATTAAACATAACTAATAGATCAATATATTACTATCATCTCCCGTTGATTGATAATGTATAAGTATTCATCACTAATAAACTATAAAATATTGTTATATGTATAAATATTTTTACTAATTTTACTTTTTAAAAGAATTTTATTTATTAAATATAAGGTTGAATTCTTTAACTTAAATTATTAAAAAAAATAACCTTTTACAAATTACTCTTTTTAGTTTAAAAAGATGGTGGGTTTATTTTAGAAAAACATATCTAGAAATTAGATAACAAAAATAAGAGGTTCAATGTTATATACTTCATATTGGCTTAATTTGAAAAATCCGAATGAAAAAAATAAAATGGTTTTCAAATAAGGGCTAAAAATTGGCCGAAACAAGTACAAATTTCCTTCCTTGTCTATACATGTAGATAATACACCGTCGTGTGGCAACACCCCACTATGGCGTCCGAACACCATCGAAGCACCACTGGCTGATCCATCGTCCCCGAAACAAAGAAAGAAACTGCTATTTGAGTTGTTTCAAGAAAGCTTCAATAGAGAACATGGAAGGTCGATTGCAAACCCAACAATTAGTAATCGTCACAACATTGAGGTTGTAATTATGGAGGCTAACGATAAGAAGCCAATTTCAAAATCGGTGAAAGGAAACTCAACGCAATCGACACCATGGTGCATTCCGGTCCCGAAGTTGACGCGAAGCCTCAGCCTCGGCGAGAAAAAGAAGAGGTTGCTCAGCCCTTGTCGCGGCGGTGGTCATGTACACCATTGAGCCCCATTATGTTTCCATGTGTGAATTTGTATGTAAATTTCTAAACTGTGAATGTTTTTGAACTTTAATATTTGCTTCAATAATAATATTTATGTCTATCCT CAACTTCTTTTCCTTTTCCTTTTCCTTTTCCTCTCTTCCCATTGAAATGTAAACCCCAGACCATTTTAACAAAACAATCTTCCTGTTCCTCTTCATCTTTATATCATCGATGTTAGACGATCTCGGCAGTGGACATTTTTAGGCCATTTGTTTCTGTCCGACGGCAATCATGGGAAATTGTGTTCTTGTTCGTAGAGACCAGAAACCTGATTCTAAATTCAAATGGTCGGTCGGTTCTGGGACCGTCGTCAATGTTAATGTTTCGAGCAATGAATCCGACAACAAACCCGAGGTTTGGGAAAAGGAGATCATAGGAAGGCTTTGTTCTAGCCCTCGTCTCTCTTCACATCTACAACCCTCTTCTCCACCATTCGGTAAAGGCGACGAGATATTTTTTGATTCACAAGCTTGGTTGGATTCTGACAACGATGATTTCTTCAGCGTCAACGGAGATAATACACCGTCGTGTGGCAACACCCCACTATGGCGTCCGAACACCATCGAAGCACCACTGGCTGATCCATCGTCCCCGAAACAAAGAAAGAAACTGCTATTTGAGTTGTTTCAAGAAAGCTTCAATAGAGAACATGGAAGGTCGATTGCAAACCCAACAATTAGTAATCGTCACAACATTGAGGTTGTAATTATGGAGGCTAACGATAAGAAGCCAATTTCAAAATCGGTGAAAGGAAACTCAACGCAATCGACACCATGGTGCATTCCGGTCCCGAAGTTGACGCGAAGCCTCAGCCTCGGCGAGAAAAAGAAGAGGTTGCTCAGCCCTTGTCGCGGCGGTGGTCATGTACACCATTGAGCCCCATTATGTTTCCATGTGTGAATTTGTATGTAAATTTCTAAACTGTGAATGTTTTTGAACTTTAATATTTGCTTCAATAATAATATTTATGTCTATCCT ATGGGAAATTGTGTTCTTGTTCGTAGAGACCAGAAACCTGATTCTAAATTCAAATGGTCGGTCGGTTCTGGGACCGTCGTCAATGTTAATGTTTCGAGCAATGAATCCGACAACAAACCCGAGGTTTGGGAAAAGGAGATCATAGGAAGGCTTTGTTCTAGCCCTCGTCTCTCTTCACATCTACAACCCTCTTCTCCACCATTCGGTAAAGGCGACGAGATATTTTTTGATTCACAAGCTTGGTTGGATTCTGACAACGATGATTTCTTCAGCGTCAACGGAGATAATACACCGTCGTGTGGCAACACCCCACTATGGCGTCCGAACACCATCGAAGCACCACTGGCTGATCCATCGTCCCCGAAACAAAGAAAGAAACTGCTATTTGAGTTGTTTCAAGAAAGCTTCAATAGAGAACATGGAAGGTCGATTGCAAACCCAACAATTAGTAATCGTCACAACATTGAGGTTGTAATTATGGAGGCTAACGATAAGAAGCCAATTTCAAAATCGGTGAAAGGAAACTCAACGCAATCGACACCATGGTGCATTCCGGTCCCGAAGTTGACGCGAAGCCTCAGCCTCGGCGAGAAAAAGAAGAGGTTGCTCAGCCCTTGTCGCGGCGGTGGTCATGTACACCATTGA MGNCVLVRRDQKPDSKFKWSVGSGTVVNVNVSSNESDNKPEVWEKEIIGRLCSSPRLSSHLQPSSPPFGKGDEIFFDSQAWLDSDNDDFFSVNGDNTPSCGNTPLWRPNTIEAPLADPSSPKQRKKLLFELFQESFNREHGRSIANPTISNRHNIEVVIMEANDKKPISKSVKGNSTQSTPWCIPVPKLTRSLSLGEKKKRLLSPCRGGGHVHH Homology
BLAST of MELO3C011878 vs. NCBI nr
Match: XP_008446050.1 (PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo] >KAA0034204.1 uncharacterized protein E6C27_scaffold65G002000 [Cucumis melo var. makuwa]) HSP 1 Score: 448.4 bits (1152), Expect = 3.6e-122 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of MELO3C011878 vs. NCBI nr
Match: XP_004135310.1 (uncharacterized protein At3g27210 [Cucumis sativus] >KGN51682.1 hypothetical protein Csa_007946 [Cucumis sativus]) HSP 1 Score: 382.1 bits (980), Expect = 3.1e-102 Identity = 188/217 (86.64%), Postives = 196/217 (90.32%), Query Frame = 0
BLAST of MELO3C011878 vs. NCBI nr
Match: TYK15716.1 (uncharacterized protein E5676_scaffold35G002150 [Cucumis melo var. makuwa]) HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91 Identity = 175/214 (81.78%), Postives = 175/214 (81.78%), Query Frame = 0
BLAST of MELO3C011878 vs. NCBI nr
Match: XP_038891766.1 (uncharacterized protein At3g27210-like [Benincasa hispida]) HSP 1 Score: 334.7 bits (857), Expect = 5.8e-88 Identity = 169/214 (78.97%), Postives = 184/214 (85.98%), Query Frame = 0
BLAST of MELO3C011878 vs. NCBI nr
Match: XP_023541226.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271.9 bits (694), Expect = 4.6e-69 Identity = 150/221 (67.87%), Postives = 165/221 (74.66%), Query Frame = 0
BLAST of MELO3C011878 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.6e-11 Identity = 69/186 (37.10%), Postives = 84/186 (45.16%), Query Frame = 0
BLAST of MELO3C011878 vs. ExPASy TrEMBL
Match: A0A5A7SSL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G002000 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 1.7e-122 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of MELO3C011878 vs. ExPASy TrEMBL
Match: A0A1S3BEU1 (uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103488900 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 1.7e-122 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of MELO3C011878 vs. ExPASy TrEMBL
Match: A0A0A0KTD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589990 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.5e-102 Identity = 188/217 (86.64%), Postives = 196/217 (90.32%), Query Frame = 0
BLAST of MELO3C011878 vs. ExPASy TrEMBL
Match: A0A5D3CZ47 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002150 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 5.4e-92 Identity = 175/214 (81.78%), Postives = 175/214 (81.78%), Query Frame = 0
BLAST of MELO3C011878 vs. ExPASy TrEMBL
Match: A0A6J1KAP3 (uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC111493225 PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 2.9e-69 Identity = 151/223 (67.71%), Postives = 165/223 (73.99%), Query Frame = 0
BLAST of MELO3C011878 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). ) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12 Identity = 69/186 (37.10%), Postives = 84/186 (45.16%), Query Frame = 0
BLAST of MELO3C011878 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 6.7e-10 Identity = 51/152 (33.55%), Postives = 73/152 (48.03%), Query Frame = 0
BLAST of MELO3C011878 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 6.3e-08 Identity = 53/199 (26.63%), Postives = 85/199 (42.71%), Query Frame = 0
BLAST of MELO3C011878 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 1.8e-07 Identity = 33/77 (42.86%), Postives = 43/77 (55.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
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