MELO3C011081 (gene) Melon (DHL92) v4

Overview


Name	MELO3C011081
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	double-stranded RNA-binding protein 1-like
Location	chr03: 26498554 .. 26501717 (-)
RNA-Seq Expression	MELO3C011081
Synteny	MELO3C011081

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAACAGCTACTTTTCGAACTCGTTTCTGAATTGCAGTATTGATGTTCTTTCAGTTGGATTTCTCAAGAAACTCGGCACTTTTTTTAGATTATTTTTAGAGAATTTTGATAATTTTACGTGGAGGTGATTGATCCTCAATAAGAGAGTATACTGGGCCACTGGGGTAACTGATTGTGTGAGATGGGATGAGAAGTGAAGATCTTGATACAATTATACTACTGTTTTCTTTTTAAAGAATGTGTTCGAAGTTATTTAATTGATTCCTTTGTTTGATGTTTCTGATGTTGTCGTGCCAGTTTTTATTTTTTTTTTATAATTTACTTGTTTCTTTTCATCTGTACTGTAACCTAGTTATGAATATAGATTTTCAGGTGAATGATGGGTTATTGTTATCATCGCTATTATTATTTTGATCGCTGATAAGTTGTTGTTTCTTTGATGAATATCAGGTGTTTCAAATTGCTATGTTTTCAAAAGCCGACTGCAGGAATATGCACAAAAAGTGGGACTTCCCACACCTGTATACGAGACTATCAAAGAAGGTCCTTCCCATGAGCCAACTTTTCATTCTACGGTGATTGTTAATGATGTTAGATATAATTCTCTACCGGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAGCTGCTGAAGTAGCTCTTATGGAACTGTCTAAATCCAGTGATCTTAATCCACATGTCTCTCAACCCGTGGTAAGATTTCATATCCTTCACCCCACATCATTTCTTGTTGTTGCTACTGCTGTTTTATTTTTCCTGAACGATCCTATGCAAAGCCCTCTTAATATCTAAATACCAGAGTCCATTGTTTGGACTCATGACTATTTGTTGGATGGTTGTTTTATACTAAGTTTAAATGTCATAAATCGAGGGACAGTTTGGTATTTGACTTTGCATTTATTAAAAGTATTTTAGTATGCAACATATTCAAAATAACAGCGACTATTGTGTGATACAACTTAGATTGCCTTTTAGAACTTGAAGACACATTTGTACAATAGAAAAGATCGTGTTCAAGTATTAAACTTTGATTTCTTCCAAGTCATGGAGAGGGCCTTGGTTGAACTTCTCTGGAGAAGACCTCTCTGCGACTGCTCGTCTTACCTAGACTCAATATCCATACCAAGCTTCTTGGTTATTCGTCCCCATTTAAGTCTTATTTAGGGTGCAACATGGTACTTTTGATAGCATTCTTTTGGCTTAAAATCAGCCAACCCCTGTAGTCTAACGATCTTTAACTTCTTTGTGTATCTACTTTTAATGCTTTGAATCCTTTATTAGAGAGGACTTCAAGATCTATTGTGCAAATAGTTTAGTATATCTTTGCTGGATTATATATATAATGAAAATTTGGCTGGTCTTTGGCTGTGTTCTCTTACTATCAGGTTACAGCAGAATTGTATCCTTTTCTTTGGAGTCTCATTTGGCTGAAGTACTTTGATATCGATGACAATATCCCTATTAGTTTAATATTGAAATAATAATAAAGCTTCATTTTTTTTTTGCTACTTCCCATACTCCCCCTAAATAAGGAATTGAGCCTAAATAGTCCCTATTTCCTCTTTTGCTATTGGGCCTTTATTAAACAGATTTCAACAGTCTATAGCTGTGTCTGCTTCTAGCGGGGCAAATGAGAAACTATACTTTCTGTAATAGTAGCATTTCTGCTTTTATTTTATTTTATTTCTTCTTTGACAATTTTGCCTTTTTCCAGCATGAAACAGGACTATGCAAAAATCTGCTTCAGGAGTATGCACAGAAGATGAACTTTGCAATCCCACTATATCAATGCCAAAAAGATGATGGTCCAGGCAGAGGATCCCTTTTCTCTTGTACTGTAGAAATTGGAGGGATCCGCTACATTGGTGCTGTAGCAAAAACAAAGAAAGAAGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAATCTTGCCCGAATTCATTGTCTGCAAAATCTATCAATCTTCAGCTCACTGTGATCCCATCATGCAAGCGAAAAGAAGCAGCAGATTGCTCAGTTACACCGAAGTCCACTGCAGCGCCCAGAGCAAAGAAAGGTCGATTTAAGAGAGGAGTGTCAAGGAAGAGAGGCTTCAGAAATGGATTAGTCAATTTGGACTTTAACAACATTGATAGATCAGCCTTGGAACCTTTTACAACTGAGGCCGTCCAGTTGCCAGGGTATGCGGGACCTGTTGATTTAGCAAAAGATACTTTGCCGAATTCCGAGTCTAGAACGACTGATCTAAGCTCAAGTAACAATGACGTTTTGGTCTCCAACGTCCAAAGTGACATGCCTCCGCACGTAAATAGTAATTTCGGAAATGGTTGTTCGGGTACTCTCAATTCCAATCAAGTAAACTGTGCAACCTCTAACGTTATGAGTTTTCCTCTCACCGACGTTCAACCAACTTGTAGTGAAGTAGGGAATGTGGCTGCTGGAGTAACAGGGGAGCTTCAGTGATTGACAGTGCTATTAAGAGCTAGCTTTGTGTTTAAAGCCACTCCTACTTACTAAATCCGAACGGTGCAATGTGCTTAGCTTGGTTTTGCAGTTTGGGGCAAGTAGTAAAATTGAAGATTCTTGAATAGCTTTACTATTAAAAAGCTTAAGAGGTTGAATTTATTGGACTGAAGATCTGAGATCAGGCATTTAAGTGGCAAATATCCGAGAGCAGTTGCTATGATCAGAGCGTTGTGAGATTTAGCTTTTAGTAGAAATCATACTTTGATATTGTCATGGCTGTAGTTTCATGATATCTATCCTTATAATCTATACCTTAACTTCACGACCAGTGTTAATATTATTAATATTATCTAAATCATATCCTGTTTCCAAACCTATTTTTCCTTCCACTTTTGAGTTCAAACAGTTGTGAAGAACGAGTGGTTCGAGCTGTAGAATGTAGAATGGTAATTGGTGTCTTGTTTCTTAGGATATTTTTTACTTCTTCACTTTGAACTATTTGTTTGTGCATTTGGGTGAAAAATCTCTTATTGTTTTTTTTAAAACAAATTTTTAGTGGTATTTTTAATTTTAATCTGTGGTTACGGAGGACTTGGTGAATGAATGGCGTTGAGTAAAAGCTGAAAAATGAAGGATTGATTTTCATATGACAATAAATTTGAAAAAAAAAA

mRNA sequence

CCAACAGCTACTTTTCGAACTCGTTTCTGAATTGCAGTATTGATGTTCTTTCAGTTGGATTTCTCAAGAAACTCGGCACTTTTTTTAGATTATTTTTAGAGAATTTTGATAATTTTACGTGGAGGTGATTGATCCTCAATAAGAGAGTATACTGGGCCACTGGGGTAACTGATTGTGTGAGATGGGATGAGAAGTGAAGATCTTGATACAATTATACTACTGTTTTCTTTTTAAAGAATGTGTTCGAAGTTATTTAATTGATTCCTTTGTTTGATGTTTCTGATGTTGTCGTGCCAGTTTTTATTTTTTTTTTATAATTTACTTGTTTCTTTTCATCTGTACTGTAACCTAGTTATGAATATAGATTTTCAGGTGAATGATGGGTTATTGTTATCATCGCTATTATTATTTTGATCGCTGATAAGTTGTTGTTTCTTTGATGAATATCAGGTGTTTCAAATTGCTATGTTTTCAAAAGCCGACTGCAGGAATATGCACAAAAAGTGGGACTTCCCACACCTGTATACGAGACTATCAAAGAAGGTCCTTCCCATGAGCCAACTTTTCATTCTACGGTGATTGTTAATGATGTTAGATATAATTCTCTACCGGGATTTTCTAATCGCAAGGCAGCAGAGCAGTCAGCTGCTGAAGTAGCTCTTATGGAACTGTCTAAATCCAGTGATCTTAATCCACATGTCTCTCAACCCGTGCATGAAACAGGACTATGCAAAAATCTGCTTCAGGAGTATGCACAGAAGATGAACTTTGCAATCCCACTATATCAATGCCAAAAAGATGATGGTCCAGGCAGAGGATCCCTTTTCTCTTGTACTGTAGAAATTGGAGGGATCCGCTACATTGGTGCTGTAGCAAAAACAAAGAAAGAAGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAATCTTGCCCGAATTCATTGTCTGCAAAATCTATCAATCTTCAGCTCACTGTGATCCCATCATGCAAGCGAAAAGAAGCAGCAGATTGCTCAGTTACACCGAAGTCCACTGCAGCGCCCAGAGCAAAGAAAGGTCGATTTAAGAGAGGAGTGTCAAGGAAGAGAGGCTTCAGAAATGGATTAGTCAATTTGGACTTTAACAACATTGATAGATCAGCCTTGGAACCTTTTACAACTGAGGCCGTCCAGTTGCCAGGGTATGCGGGACCTGTTGATTTAGCAAAAGATACTTTGCCGAATTCCGAGTCTAGAACGACTGATCTAAGCTCAAGTAACAATGACGTTTTGGTCTCCAACGTCCAAAGTGACATGCCTCCGCACGTAAATAGTAATTTCGGAAATGGTTGTTCGGGTACTCTCAATTCCAATCAAGTAAACTGTGCAACCTCTAACGTTATGAGTTTTCCTCTCACCGACGTTCAACCAACTTGTAGTGAAGTAGGGAATGTGGCTGCTGGAGTAACAGGGGAGCTTCAGTGATTGACAGTGCTATTAAGAGCTAGCTTTGTGTTTAAAGCCACTCCTACTTACTAAATCCGAACGGTGCAATGTGCTTAGCTTGGTTTTGCAGTTTGGGGCAAGTAGTAAAATTGAAGATTCTTGAATAGCTTTACTATTAAAAAGCTTAAGAGGTTGAATTTATTGGACTGAAGATCTGAGATCAGGCATTTAAGTGGCAAATATCCGAGAGCAGTTGCTATGATCAGAGCGTTGTGAGATTTAGCTTTTAGTAGAAATCATACTTTGATATTGTCATGGCTGTAGTTTCATGATATCTATCCTTATAATCTATACCTTAACTTCACGACCAGTGTTAATATTATTAATATTATCTAAATCATATCCTGTTTCCAAACCTATTTTTCCTTCCACTTTTGAGTTCAAACAGTTGTGAAGAACGAGTGGTTCGAGCTGTAGAATGTAGAATGGTAATTGGTGTCTTGTTTCTTAGGATATTTTTTACTTCTTCACTTTGAACTATTTGTTTGTGCATTTGGGTGAAAAATCTCTTATTGTTTTTTTTAAAACAAATTTTTAGTGGTATTTTTAATTTTAATCTGTGGTTACGGAGGACTTGGTGAATGAATGGCGTTGAGTAAAAGCTGAAAAATGAAGGATTGATTTTCATATGACAATAAATTTGAAAAAAAAAA

Coding sequence (CDS)

ATGGAACTGTCTAAATCCAGTGATCTTAATCCACATGTCTCTCAACCCGTGCATGAAACAGGACTATGCAAAAATCTGCTTCAGGAGTATGCACAGAAGATGAACTTTGCAATCCCACTATATCAATGCCAAAAAGATGATGGTCCAGGCAGAGGATCCCTTTTCTCTTGTACTGTAGAAATTGGAGGGATCCGCTACATTGGTGCTGTAGCAAAAACAAAGAAAGAAGCAGAAATTAAAGCTGCAAGAACTGCTTTGTTAGCAATCCAATCTTGCCCGAATTCATTGTCTGCAAAATCTATCAATCTTCAGCTCACTGTGATCCCATCATGCAAGCGAAAAGAAGCAGCAGATTGCTCAGTTACACCGAAGTCCACTGCAGCGCCCAGAGCAAAGAAAGGTCGATTTAAGAGAGGAGTGTCAAGGAAGAGAGGCTTCAGAAATGGATTAGTCAATTTGGACTTTAACAACATTGATAGATCAGCCTTGGAACCTTTTACAACTGAGGCCGTCCAGTTGCCAGGGTATGCGGGACCTGTTGATTTAGCAAAAGATACTTTGCCGAATTCCGAGTCTAGAACGACTGATCTAAGCTCAAGTAACAATGACGTTTTGGTCTCCAACGTCCAAAGTGACATGCCTCCGCACGTAAATAGTAATTTCGGAAATGGTTGTTCGGGTACTCTCAATTCCAATCAAGTAAACTGTGCAACCTCTAACGTTATGAGTTTTCCTCTCACCGACGTTCAACCAACTTGTAGTGAAGTAGGGAATGTGGCTGCTGGAGTAACAGGGGAGCTTCAGTGA

Protein sequence

MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCSVTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ

Homology

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BLAST of MELO3C011081 vs. NCBI nr
Match: XP_008444917.1 (PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE
Sbjct: 74  MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 133

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS 120
           IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS
Sbjct: 134 IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS 193

Query: 121 VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV 180
           VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV
Sbjct: 194 VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV 253

Query: 181 DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN 240
           DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN
Sbjct: 254 DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN 313

Query: 241 VMSFPLTDVQPTCSEVGNVAAGVTGELQ 269
           VMSFPLTDVQPTCSEVGNVAAGVTGELQ
Sbjct: 314 VMSFPLTDVQPTCSEVGNVAAGVTGELQ 341

[Close]

BLAST of MELO3C011081 vs. NCBI nr
Match: XP_008444916.1 (PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 1.3e-145
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE
Sbjct: 80  MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 139

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS 120
           IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS
Sbjct: 140 IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS 199

Query: 121 VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV 180
           VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV
Sbjct: 200 VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV 259

Query: 181 DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN 240
           DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN
Sbjct: 260 DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN 319

Query: 241 VMSFPLTDVQPTCSEVGNVAAGVTGELQ 269
           VMSFPLTDVQPTCSEVGNVAAGVTGELQ
Sbjct: 320 VMSFPLTDVQPTCSEVGNVAAGVTGELQ 347

[Close]

BLAST of MELO3C011081 vs. NCBI nr
Match: KAA0065099.1 (double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 513.8 bits (1322), Expect = 8.7e-142
Identity = 263/269 (97.77%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE
Sbjct: 80  MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 139

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADC 120
           IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKS+N +QLTVIPSCKRKEAADC
Sbjct: 140 IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSVNQVQLTVIPSCKRKEAADC 199

Query: 121 SVTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGP 180
           SVTPKSTAAPRAKKGRFKRGV RKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGP
Sbjct: 200 SVTPKSTAAPRAKKGRFKRGVLRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGP 259

Query: 181 VDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATS 240
           VDLAKDTLPNSESRTTDLSSSNND LVSNVQSDMPPHVNSNFGN CSGTLNSNQVNCATS
Sbjct: 260 VDLAKDTLPNSESRTTDLSSSNNDFLVSNVQSDMPPHVNSNFGNACSGTLNSNQVNCATS 319

Query: 241 NVMSFPLTDVQPTCSEVGNVAAGVTGELQ 269
           NVMSFPLTDVQPTCSEVGNVAAGVTGELQ
Sbjct: 320 NVMSFPLTDVQPTCSEVGNVAAGVTGELQ 348

[Close]

BLAST of MELO3C011081 vs. NCBI nr
Match: XP_011649689.1 (double-stranded RNA-binding protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 460.7 bits (1184), Expect = 8.7e-126
Identity = 242/272 (88.97%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE
Sbjct: 80  MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 139

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADC 120
           IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KS+N +QLTVIPSCKRKEAADC
Sbjct: 140 IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSVNQVQLTVIPSCKRKEAADC 199

Query: 121 SVTPKSTAAPRAKKG---RFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGY 180
           SV PKSTA+PRAKKG   RFKRGV R R F NGLVNLDF+N DRS LEPFTT  VQLPGY
Sbjct: 200 SVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDNTDRSTLEPFTTGVVQLPGY 259

Query: 181 AGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNC 240
            GPVDLAKDTL NSE RTTDLSS+NNDVLVSNVQSDMP  +N N GNGCSGT NSNQVNC
Sbjct: 260 VGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLLNGNSGNGCSGTFNSNQVNC 319

Query: 241 ATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 269
           ATSNVMS PLTDVQPTCSEV NVAAGVTGELQ
Sbjct: 320 ATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 351

[Close]

BLAST of MELO3C011081 vs. NCBI nr
Match: XP_038884949.1 (double-stranded RNA-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 390.2 bits (1001), Expect = 1.4e-104
Identity = 216/274 (78.83%), Postives = 233/274 (85.04%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           MELSKSSDLNPHVS PVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRG LFSCTVE
Sbjct: 80  MELSKSSDLNPHVSLPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGPLFSCTVE 139

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS-AKSIN-LQLTVIPSCKRKEAAD 120
           IGGIRYIGA AKTKKEAEIKAARTALLAIQSCP SLS AK +N +QLTVIPSCKRKEAAD
Sbjct: 140 IGGIRYIGAAAKTKKEAEIKAARTALLAIQSCPTSLSAAKPVNQVQLTVIPSCKRKEAAD 199

Query: 121 CSVTPKST-AAPRAKKGRFKR--GVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPG 180
           CSV PK+T  APR+K+GRFKR  GV RKRG RN ++NL  N ID S LEPF TE +Q+PG
Sbjct: 200 CSVKPKTTNGAPRSKRGRFKRGGGVLRKRGLRNRVLNL--NYIDTSTLEPFKTEVIQVPG 259

Query: 181 YAGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVN 240
              PVDLAKDT+ NSE R TDLSSSNNDVL SNVQ++MP  +N N  NGCS T +SNQ+N
Sbjct: 260 SGEPVDLAKDTVLNSEHRMTDLSSSNNDVLGSNVQTNMPAFLNGN-ENGCSDTFSSNQIN 319

Query: 241 CATSNVMSFPLTDVQPTCSEVGNVAA-GVTGELQ 269
           C TS+V SFPL +VQPTCSEV NVAA GVTGELQ
Sbjct: 320 CPTSDVTSFPLANVQPTCSEVANVAAPGVTGELQ 350

[Close]

BLAST of MELO3C011081 vs. ExPASy Swiss-Prot
Match: O04492 (Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.8e-34
Identity = 82/138 (59.42%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 2   ELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEI 61
           EL+KSS+L+  VSQPVHETGLCKNLLQEYAQKMN+AIPLYQCQK +  GR + F+CTVEI
Sbjct: 81  ELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQFTCTVEI 140

Query: 62  GGIRYIGAVAKTKKEAEIKAARTALLAIQS-CPNSLSAKSINLQLTVIPSCKRKEAADCS 121
           GGI+Y GA  +TKK+AEI A RTALLAIQS   N+L+  + N QLTV+P C++K      
Sbjct: 141 GGIKYTGAATRTKKDAEISAGRTALLAIQSDTKNNLA--NYNTQLTVLP-CEKKTIQAAI 200

Query: 122 VTPKSTAAPRAKKGRFKR 139
              ++    +A+K +FK+
Sbjct: 201 PLKETVKTLKARKAQFKK 215

[Close]

BLAST of MELO3C011081 vs. ExPASy Swiss-Prot
Match: Q0DJA3 (Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB3 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.0e-23
Identity = 74/146 (50.68%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRG-SLFSCTV 60
           ME+ KS   N ++   V ETGLCKNLLQEYAQKMN+AIP Y C K   P  G + F CTV
Sbjct: 100 MEIVKSIPANANI-PAVQETGLCKNLLQEYAQKMNYAIPSYICTK---PASGLAPFLCTV 159

Query: 61  EIGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADC 120
           EIGGI+YIGA A+TKK+AEIKAARTALLAIQ    S  + +   +  V+P   ++   + 
Sbjct: 160 EIGGIQYIGAAARTKKDAEIKAARTALLAIQG--QSEGSANGATKYIVVPG--KRVGKEV 219

Query: 121 SVTPKSTAAP-RAKKGRFKRGVSRKR 145
              P  T  P +AKKG FK+  ++++
Sbjct: 220 EKRPIETPKPLKAKKGGFKKKWNKRK 237

[Close]

BLAST of MELO3C011081 vs. ExPASy Swiss-Prot
Match: Q0IQN6 (Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB8 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-22
Identity = 71/145 (48.97%), Postives = 92/145 (63.45%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           ME+ KS   N ++   V ETGLCKNLLQEYAQKMN+AIP Y C K       + F CTVE
Sbjct: 98  MEIVKSIPANANI-PAVQETGLCKNLLQEYAQKMNYAIPSYICTK--SASGLAPFICTVE 157

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS 120
           IGGI+YIGA A+TKK+AEIKAARTALLAIQ    S  + +   +  V+P   ++   +  
Sbjct: 158 IGGIQYIGAAARTKKDAEIKAARTALLAIQG--QSEGSANGATKYIVVPG--KRVGKEVE 217

Query: 121 VTPKSTAAP-RAKKGRFKRGVSRKR 145
             P  T  P + KKG FK+  ++++
Sbjct: 218 KRPIETPKPLKVKKGGFKKKWNKRK 235

[Close]

BLAST of MELO3C011081 vs. ExPASy Swiss-Prot
Match: Q0IV63 (Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB7 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-22
Identity = 71/145 (48.97%), Postives = 92/145 (63.45%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           ME+ KS   N ++   V ETGLCKNLLQEYAQKMN+AIP Y C K       + F CTVE
Sbjct: 98  MEIVKSIPANANI-PAVQETGLCKNLLQEYAQKMNYAIPSYICTK--SASGLAPFICTVE 157

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS 120
           IGGI+YIGA A+TKK+AEIKAARTALLAIQ    S  + +   +  V+P   ++   +  
Sbjct: 158 IGGIQYIGAAARTKKDAEIKAARTALLAIQG--QSEGSANGATKYIVVPG--KRVGKEVE 217

Query: 121 VTPKSTAAP-RAKKGRFKRGVSRKR 145
             P  T  P + KKG FK+  ++++
Sbjct: 218 KMPIETPKPLKIKKGGFKKKWNKRK 235

[Close]

BLAST of MELO3C011081 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-09
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 2   ELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEI 61
           ELSK    +   ++ + ETG+ KNLLQE A +    +P+Y   +  GPG   +F+CTVE+
Sbjct: 67  ELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIR-SGPGHTPVFTCTVEL 126

Query: 62  GGIRYIGAVAKTKKEAEIKAARTALLAIQSCP 94
            G+ + G   KTKK+A+  AA  A   ++  P
Sbjct: 127 AGMTFTGNPGKTKKQAQKNAAMAAWSELKQLP 157

[Close]

BLAST of MELO3C011081 vs. ExPASy TrEMBL
Match: A0A1S3BBH3 (double-stranded RNA-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488118 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.3e-146
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE
Sbjct: 74  MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 133

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS 120
           IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS
Sbjct: 134 IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS 193

Query: 121 VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV 180
           VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV
Sbjct: 194 VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV 253

Query: 181 DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN 240
           DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN
Sbjct: 254 DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN 313

Query: 241 VMSFPLTDVQPTCSEVGNVAAGVTGELQ 269
           VMSFPLTDVQPTCSEVGNVAAGVTGELQ
Sbjct: 314 VMSFPLTDVQPTCSEVGNVAAGVTGELQ 341

[Close]

BLAST of MELO3C011081 vs. ExPASy TrEMBL
Match: A0A1S3BBH0 (double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488118 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 6.3e-146
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE
Sbjct: 80  MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 139

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS 120
           IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS
Sbjct: 140 IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSINLQLTVIPSCKRKEAADCS 199

Query: 121 VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV 180
           VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV
Sbjct: 200 VTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGPV 259

Query: 181 DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN 240
           DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN
Sbjct: 260 DLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATSN 319

Query: 241 VMSFPLTDVQPTCSEVGNVAAGVTGELQ 269
           VMSFPLTDVQPTCSEVGNVAAGVTGELQ
Sbjct: 320 VMSFPLTDVQPTCSEVGNVAAGVTGELQ 347

[Close]

BLAST of MELO3C011081 vs. ExPASy TrEMBL
Match: A0A5A7VI00 (Double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004330 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.2e-142
Identity = 263/269 (97.77%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE
Sbjct: 80  MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 139

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADC 120
           IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKS+N +QLTVIPSCKRKEAADC
Sbjct: 140 IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSVNQVQLTVIPSCKRKEAADC 199

Query: 121 SVTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGP 180
           SVTPKSTAAPRAKKGRFKRGV RKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGP
Sbjct: 200 SVTPKSTAAPRAKKGRFKRGVLRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGYAGP 259

Query: 181 VDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCATS 240
           VDLAKDTLPNSESRTTDLSSSNND LVSNVQSDMPPHVNSNFGN CSGTLNSNQVNCATS
Sbjct: 260 VDLAKDTLPNSESRTTDLSSSNNDFLVSNVQSDMPPHVNSNFGNACSGTLNSNQVNCATS 319

Query: 241 NVMSFPLTDVQPTCSEVGNVAAGVTGELQ 269
           NVMSFPLTDVQPTCSEVGNVAAGVTGELQ
Sbjct: 320 NVMSFPLTDVQPTCSEVGNVAAGVTGELQ 348

[Close]

BLAST of MELO3C011081 vs. ExPASy TrEMBL
Match: A0A0A0LRU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370450 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 4.2e-126
Identity = 242/272 (88.97%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE
Sbjct: 80  MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 139

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADC 120
           IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLS KS+N +QLTVIPSCKRKEAADC
Sbjct: 140 IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSEKSVNQVQLTVIPSCKRKEAADC 199

Query: 121 SVTPKSTAAPRAKKG---RFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQLPGY 180
           SV PKSTA+PRAKKG   RFKRGV R R F NGLVNLDF+N DRS LEPFTT  VQLPGY
Sbjct: 200 SVKPKSTASPRAKKGRFKRFKRGVLRNRDFINGLVNLDFDNTDRSTLEPFTTGVVQLPGY 259

Query: 181 AGPVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNC 240
            GPVDLAKDTL NSE RTTDLSS+NNDVLVSNVQSDMP  +N N GNGCSGT NSNQVNC
Sbjct: 260 VGPVDLAKDTLLNSECRTTDLSSNNNDVLVSNVQSDMPLLLNGNSGNGCSGTFNSNQVNC 319

Query: 241 ATSNVMSFPLTDVQPTCSEVGNVAAGVTGELQ 269
           ATSNVMS PLTDVQPTCSEV NVAAGVTGELQ
Sbjct: 320 ATSNVMSSPLTDVQPTCSEVANVAAGVTGELQ 351

[Close]

BLAST of MELO3C011081 vs. ExPASy TrEMBL
Match: A0A6J1HEW7 (double-stranded RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462846 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.9e-98
Identity = 198/269 (73.61%), Postives = 217/269 (80.67%), Query Frame = 0


Query: 1   MELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVE 60
           MELSKS+DLNPHVS PVHETGLCKNLLQEYAQKMNFAIPLYQC+KDD  GR  LFSCTVE
Sbjct: 80  MELSKSNDLNPHVSLPVHETGLCKNLLQEYAQKMNFAIPLYQCKKDDSSGRTPLFSCTVE 139

Query: 61  IGGIRYIGAVAKTKKEAEIKAARTALLAIQSCPNSLSAKSIN-LQLTVIPSCKRKEAADC 120
           IGGIRYIGA AKTKKEAEIKAARTALLAIQSCP SL   S+N +QLTVIP CKRKEAADC
Sbjct: 140 IGGIRYIGAAAKTKKEAEIKAARTALLAIQSCPTSLPENSVNQVQLTVIP-CKRKEAADC 199

Query: 121 SVTPKSTAAPRAKKGRFKRGVSRKRGFRNGLVNLDFNNIDRSALEPFTTEAVQ-LPGYAG 180
           SV PK+  APR KKGRFK+  S+K+G RNGL NL+F N DRS+ EP  T  V  +PG   
Sbjct: 200 SVKPKTAGAPRIKKGRFKKVASKKKGHRNGLPNLEF-NFDRSSFEPLETNGVDPVPGLGE 259

Query: 181 PVDLAKDTLPNSESRTTDLSSSNNDVLVSNVQSDMPPHVNSNFGNGCSGTLNSNQVNCAT 240
            V+LAKDT+ NSE +TTDLSSS NDVLVSN+QSD P   N NFGN      +SNQ+NC+T
Sbjct: 260 SVELAKDTVLNSEYKTTDLSSSGNDVLVSNIQSDTPQLPNGNFGNDRLDAFSSNQINCST 319

Query: 241 SNVMSFPLTDVQPTCSEVGNVAAGVTGEL 268
           S+VMSFPL DVQ TC EV NVA GVTGEL
Sbjct: 320 SDVMSFPLPDVQATCGEVANVATGVTGEL 346

[Close]

BLAST of MELO3C011081 vs. TAIR 10
Match: AT1G09700.1 (dsRNA-binding domain-like superfamily protein )

HSP 1 Score: 147.1 bits (370), Expect = 2.0e-35
Identity = 82/138 (59.42%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 2   ELSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEI 61
           EL+KSS+L+  VSQPVHETGLCKNLLQEYAQKMN+AIPLYQCQK +  GR + F+CTVEI
Sbjct: 81  ELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQFTCTVEI 140

Query: 62  GGIRYIGAVAKTKKEAEIKAARTALLAIQS-CPNSLSAKSINLQLTVIPSCKRKEAADCS 121
           GGI+Y GA  +TKK+AEI A RTALLAIQS   N+L+  + N QLTV+P C++K      
Sbjct: 141 GGIKYTGAATRTKKDAEISAGRTALLAIQSDTKNNLA--NYNTQLTVLP-CEKKTIQAAI 200

Query: 122 VTPKSTAAPRAKKGRFKR 139
              ++    +A+K +FK+
Sbjct: 201 PLKETVKTLKARKAQFKK 215

[Close]

BLAST of MELO3C011081 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-10
Identity = 36/91 (39.56%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 3   LSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIG 62
           LS         ++ + ETG+ KNLLQE A +    +P+Y   +  GPG    FSCTVE+ 
Sbjct: 68  LSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVR-SGPGHIPTFSCTVELA 127

Query: 63  GIRYIGAVAKTKKEAEIKAARTALLAIQSCP 94
           G+ + G  AKTKK+AE  AA  A  +++  P
Sbjct: 128 GMSFNGESAKTKKQAEKNAAIAAWFSLRKMP 157

[Close]

BLAST of MELO3C011081 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-10
Identity = 36/91 (39.56%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 3   LSKSSDLNPHVSQPVHETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIG 62
           LS         ++ + ETG+ KNLLQE A +    +P+Y   +  GPG    FSCTVE+ 
Sbjct: 68  LSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVR-SGPGHIPTFSCTVELA 127

Query: 63  GIRYIGAVAKTKKEAEIKAARTALLAIQSCP 94
           G+ + G  AKTKK+AE  AA  A  +++  P
Sbjct: 128 GMSFNGESAKTKKQAEKNAAIAAWFSLRKMP 157

[Close]

BLAST of MELO3C011081 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 55.8 bits (133), Expect = 6.0e-08
Identity = 32/70 (45.71%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 19  ETGLCKNLLQEYAQKMNFAIPLYQCQKDDG---PGRGSLFSCTVEIGGIRYIGAVAKTKK 78
           ETG+ KNLLQE A +    +P+Y   +      PG    FSCTVE+ G+ + G  AKTKK
Sbjct: 84  ETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPG----FSCTVELAGMTFTGESAKTKK 143

Query: 79  EAEIKAARTA 86
           +AE  AA  A
Sbjct: 144 QAEKNAAIAA 149

[Close]

BLAST of MELO3C011081 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-07
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 19  ETGLCKNLLQEYAQKMNFAIPLYQCQKDDGPGRGSLFSCTVEIGGIRYIGAVAKTKKEAE 78
           ETG+ KNLLQE AQ++   +P Y   +  G G   +F+ TVE+ GI + G  AK KK+AE
Sbjct: 84  ETGVYKNLLQEIAQRVGAPLPRYTTFR-SGLGHQPVFTGTVELAGITFTGDPAKNKKQAE 143

Query: 79  IKAARTALLAIQSCPNSLSA 99
             AA  A  +++      S+
Sbjct: 144 KNAAMAAWSSLKQLAKETSS 162

The following BLAST results are available for this feature:

BLAST of MELO3C011081 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444917.1	1.3e-145	100.00	PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo]	[more]
XP_008444916.1	1.3e-145	100.00	PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo]	[more]
KAA0065099.1	8.7e-142	97.77	double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011649689.1	8.7e-126	88.97	double-stranded RNA-binding protein 1 isoform X1 [Cucumis sativus]	[more]
XP_038884949.1	1.4e-104	78.83	double-stranded RNA-binding protein 1-like [Benincasa hispida]	[more]

BLAST of MELO3C011081 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04492	2.8e-34	59.42	Double-stranded RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRB1 PE...	[more]
Q0DJA3	1.0e-23	50.68	Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0IQN6	1.4e-22	48.97	Double-stranded RNA-binding protein 8 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0IV63	1.9e-22	48.97	Double-stranded RNA-binding protein 7 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0DKP4	1.1e-09	38.04	Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of MELO3C011081 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BBH3	6.3e-146	100.00	double-stranded RNA-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S3BBH0	6.3e-146	100.00	double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7VI00	4.2e-142	97.77	Double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0LRU8	4.2e-126	88.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370450 PE=4 SV=1	[more]
A0A6J1HEW7	4.9e-98	73.61	double-stranded RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of MELO3C011081 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09700.1	2.0e-35	59.42	dsRNA-binding domain-like superfamily protein	[more]
AT3G26932.1	1.7e-10	39.56	dsRNA-binding protein 3	[more]
AT3G26932.2	1.7e-10	39.56	dsRNA-binding protein 3	[more]
AT5G41070.1	6.0e-08	45.71	dsRNA-binding protein 5	[more]
AT2G28380.1	1.3e-07	40.00	dsRNA-binding protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 23..90 e-value: 6.5E-18 score: 75.5
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 24..87 e-value: 2.9E-15 score: 56.7
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 22..91 score: 12.402353
None	No IPR available	GENE3D	3.30.160.20		coord: 16..91 e-value: 1.4E-23 score: 84.9
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 24..95
IPR031147	Double-stranded RNA-binding protein	PANTHER	PTHR11207:SF1	DOUBLE-STRANDED RNA-BINDING PROTEIN 1	coord: 1..150
IPR011907	Ribonuclease III	PANTHER	PTHR11207	RIBONUCLEASE III	coord: 1..150
IPR044451	AtDRB-like, second double-stranded RNA binding domain, plant	CDD	cd19908	DSRM_AtDRB-like_rpt2	coord: 21..90 e-value: 1.55576E-31 score: 109.491

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C011081.1	MELO3C011081.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016075	rRNA catabolic process
molecular_function	GO:0003725	double-stranded RNA binding
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding