MELO3C010460 (gene) Melon (DHL92) v4
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACTGCTTTTTCAATTTCCATTTTATTTATTTATTTCCCCGAATGGGGTGGCCGAGGCCATCAACAGTCCACAGCAATCGATTCTAGGGCTAACCGTTCAGACGAGGCTCATAAAATTCACCGCCCCAGATCGTAATTCTATAAGTTCATCGCCGGAGAAGCGTCATCCCCGCCGGCAATCGCTGTTTGGGTGTGTGAAAGTTTTTTTTGTGTGTATATTTTCTCCATTTTTCTTCTGCTTTCAGCTTCGCTTCCCCTCTGTCTGCGATAAATTTAATTTTGATATCTTTCGGCCTTTCTGCACATAGGAGTGATGACTATTAAGGTGTTGCGAGCTGAGAAATGAGTGCAAATAGAAATGTAGGTTTATGGGTGGGTTTTAGAACCTTCGTTCCTGATAATTTTTTTGTGAGGGTGGGAGTTTGAGCTAGAACTGCTAATTTTCTTCGTTTAATGAAAAGATGGAACTGTGTTTTTACTGTATCTGAATTCTGCACCAGCCCATTTTCTTGAAAACCCTTGAATTATTTCGAAGTTAGGATTGTTTTGATTGTTCTTTCCATGGACAGCTCTTTCTTAAAGTTTACTTTTGATATTCAGATTGTTGAATGTTGTACGCTAACATATAATTTTCTTTCTCAGCTAATATTGGAGTTGATTTTTGCTGCTGTTTCTCAGTAGTAATTGAGTTGATTTTATTGAGGAAGAGATATGGGAAGCCAAGAAAATGTTAAACATATTGAGGATTGCTCAGTTTCAAAGTAAGCTCTCTTCTCCTTCCTTTCCCATTTCGCGTTTCACTTTCTTTCTATCTCTGAGGGCTTTTCTCCTTTTCCACTTGTTGAAAGCTGGACTGTATACTTGCAAATGAAAATTCCTCTAGAATCTTATCTTGTAACACCATCTTGTTGTGCCTGCAAATCTCAAATTGCTTAGCAAAAAAAAAAAAGAAAAAAAAAAACAGGATAGTTTTTCCAAAACCGAGGGATATGTATGTGTTGTTTTGTTTCTAAATGTTAAGACTAGCTTTAACTTCTGCCAAGTAGGGTATTTACTCCAAAACCAATACGTTTACCTTATTCATCCTTGAATCTCATTGCTTGTTTCGGGTATCGAATGTAAGCAGAAATTTGTTCAAAATGTTGTGCCGAATGTCTTAACTCTGGTGTAGCCATGGTTTAAATTTTGGTAAATATAACTTAGTAGCTACACGTAGGTAGTTTGTCTAAGATGACAGAAGGAATCTCGAAAAGTTCTACCGTTTGTAATCTGAACTGTATCATTTTATTAAGGTAACCCTGCAACCTTCCACCTATTGAGCATAATGTTCTATGAGTTTTTGGGTTTAAATGCTAGTTTGGTCTCGTAATTTAATTCATTTTGCTTCATATACTGTTAAAATGTTTAGTGGTCCTTAGTTTCAAAATGTCCATTTCTATCTCTGTTGTGGAGGTTGGTCCCTTCATTTTCATATTTATGTATATTTATATATTAAAATTTTAGCATGGCACTTGATTGTTAAAGCTTTTCATTGTGTATAAAACTTGTGTTAAAACTTTGCAAATGGTGATCAATATAACCAAAAAATTTTAAATGTGGGATCAAAATAAACTTTTTTTTGGAAGTACATGAACTAAAATGATAAAAAAAAAAAAAAAAAAAAAATACAAGGATCAAAATGATCATTTTGGAACTTTTTTTGCCCTCCTTTCCTTGTGTCTTTAACTGGTACTTTATGTGTTGATTTTTATTGACGATTGGACATTCACAGTGCGTTGGGTACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAATTCCAGTGGGAATAAAGAGGAAATCACTTGCACCCCTTGTCTTTTTTGGCACAACTGGTACTATGCTTGACATTATAATGGGAATTAGTGCTTGTGAAAGAGAACATGCTGAGCGTCAAATGAAGCTATTAGAGGAAGCTCAAAACTCTGCTCCTCAATCGTCTCTTAACGATTCCAATTCCCATTCTTGATTTTTTGCTTACACGGTTGTTATCACCCGTTCGTATCGTGCCATGCTTAATGACCTTTTCTTCCCCCAACTGTGTTAAATGATGAACACTCTTGTGGCATGGCCTTTGGCTGGGTTTGTTCAGCCTTCTTTCAAATCACAGTGACATTGCATCAGTTATGGTTCACGAAATCGTTTGCCTTGGCTTTATTGATTTGCAATAAAATTATTCTTTAGTTACTAAGGTACGAATTTTCATGTGCATTAAGATTTTATAAACTACTTTGAGTATTTAGTTTCATTGTTCTCTTGAAGAACCAACAGTTTCAGAAGTAAATAGGTTCGAATTCAAATAAATCTTTATGTGTAACGTTTCTTC ATGGAACTGCTTTTTCAATTTCCATTTTATTTATTTATTTCCCCGAATGGGGTGGCCGAGGCCATCAACAGTCCACAGCAATCGATTCTAGGGCTAACCGTTCAGACGAGGCTCATAAAATTCACCGCCCCAGATCGTAATTCTATAAGTTCATCGCCGGAGAAGCGTCATCCCCGCCGGCAATCGCTGTTTGGGTGTGTGAAACTACACGTAGGTAGTTTGTCTAAGATGACAGAAGGAATCTCGAAAAGTTCTACCGTTTGTAATCTGAACTGTATCATTTTATTAAGTGCGTTGGGTACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAATTCCAGTGGGAATAAAGAGGAAATCACTTGCACCCCTTGTCTTTTTTGGCACAACTGGTACTATGCTTGACATTATAATGGGAATTAGTGCTTGTGAAAGAGAACATGCTGAGCGTCAAATGAAGCTATTAGAGGAAGCTCAAAACTCTGCTCCTCAATCGTCTCTTAACGATTCCAATTCCCATTCTTGATTTTTTGCTTACACGGTTGTTATCACCCGTTCGTATCGTGCCATGCTTAATGACCTTTTCTTCCCCCAACTGTGTTAAATGATGAACACTCTTGTGGCATGGCCTTTGGCTGGGTTTGTTCAGCCTTCTTTCAAATCACAGTGACATTGCATCAGTTATGGTTCACGAAATCGTTTGCCTTGGCTTTATTGATTTGCAATAAAATTATTCTTTAGTTACTAAGGTACGAATTTTCATGTGCATTAAGATTTTATAAACTACTTTGAGTATTTAGTTTCATTGTTCTCTTGAAGAACCAACAGTTTCAGAAGTAAATAGGTTCGAATTCAAATAAATCTTTATGTGTAACGTTTCTTC ATGGAACTGCTTTTTCAATTTCCATTTTATTTATTTATTTCCCCGAATGGGGTGGCCGAGGCCATCAACAGTCCACAGCAATCGATTCTAGGGCTAACCGTTCAGACGAGGCTCATAAAATTCACCGCCCCAGATCGTAATTCTATAAGTTCATCGCCGGAGAAGCGTCATCCCCGCCGGCAATCGCTGTTTGGGTGTGTGAAACTACACGTAGGTAGTTTGTCTAAGATGACAGAAGGAATCTCGAAAAGTTCTACCGTTTGTAATCTGAACTGTATCATTTTATTAAGTGCGTTGGGTACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAATTCCAGTGGGAATAAAGAGGAAATCACTTGCACCCCTTGTCTTTTTTGGCACAACTGGTACTATGCTTGACATTATAATGGGAATTAGTGCTTGTGAAAGAGAACATGCTGAGCGTCAAATGAAGCTATTAGAGGAAGCTCAAAACTCTGCTCCTCAATCGTCTCTTAACGATTCCAATTCCCATTCTTGA MELLFQFPFYLFISPNGVAEAINSPQQSILGLTVQTRLIKFTAPDRNSISSSPEKRHPRRQSLFGCVKLHVGSLSKMTEGISKSSTVCNLNCIILLSALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEEAQNSAPQSSLNDSNSHS Homology
BLAST of MELO3C010460 vs. NCBI nr
Match: TYK19240.1 (putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 259.6 bits (662), Expect = 1.9e-65 Identity = 143/175 (81.71%), Postives = 143/175 (81.71%), Query Frame = 0
BLAST of MELO3C010460 vs. NCBI nr
Match: XP_016899847.1 (PREDICTED: uncharacterized protein LOC103487570 isoform X1 [Cucumis melo]) HSP 1 Score: 194.9 bits (494), Expect = 5.8e-46 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of MELO3C010460 vs. NCBI nr
Match: XP_008444129.1 (PREDICTED: uncharacterized protein LOC103487570 isoform X2 [Cucumis melo] >XP_016899848.1 PREDICTED: uncharacterized protein LOC103487570 isoform X2 [Cucumis melo]) HSP 1 Score: 149.8 bits (377), Expect = 2.1e-32 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of MELO3C010460 vs. NCBI nr
Match: XP_038899123.1 (uncharacterized protein LOC120086511 [Benincasa hispida] >XP_038899124.1 uncharacterized protein LOC120086511 [Benincasa hispida] >XP_038899125.1 uncharacterized protein LOC120086511 [Benincasa hispida]) HSP 1 Score: 142.1 bits (357), Expect = 4.5e-30 Identity = 74/79 (93.67%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of MELO3C010460 vs. NCBI nr
Match: KAE8649629.1 (hypothetical protein Csa_012354 [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 1.0e-29 Identity = 85/130 (65.38%), Postives = 94/130 (72.31%), Query Frame = 0
BLAST of MELO3C010460 vs. ExPASy TrEMBL
Match: A0A5D3D6Z5 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00400 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 9.3e-66 Identity = 143/175 (81.71%), Postives = 143/175 (81.71%), Query Frame = 0
BLAST of MELO3C010460 vs. ExPASy TrEMBL
Match: A0A1S4DV32 (uncharacterized protein LOC103487570 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487570 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 2.8e-46 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of MELO3C010460 vs. ExPASy TrEMBL
Match: A0A1S3B9M1 (uncharacterized protein LOC103487570 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487570 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.0e-32 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of MELO3C010460 vs. ExPASy TrEMBL
Match: A0A0A0L1X1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G371820 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 2.4e-29 Identity = 73/79 (92.41%), Postives = 76/79 (96.20%), Query Frame = 0
BLAST of MELO3C010460 vs. ExPASy TrEMBL
Match: A0A6J1FMK1 (uncharacterized protein LOC111446769 OS=Cucurbita moschata OX=3662 GN=LOC111446769 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 2.4e-29 Identity = 75/95 (78.95%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of MELO3C010460 vs. TAIR 10
Match: AT1G21930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3); Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24 Identity = 55/79 (69.62%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of MELO3C010460 vs. TAIR 10
Match: AT3G42150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 108.2 bits (269), Expect = 6.7e-24 Identity = 53/77 (68.83%), Postives = 66/77 (85.71%), Query Frame = 0
BLAST of MELO3C010460 vs. TAIR 10
Match: AT3G42150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 42 Blast hits to 42 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 108.2 bits (269), Expect = 6.7e-24 Identity = 53/77 (68.83%), Postives = 66/77 (85.71%), Query Frame = 0
BLAST of MELO3C010460 vs. TAIR 10
Match: AT3G42150.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 108.2 bits (269), Expect = 6.7e-24 Identity = 53/77 (68.83%), Postives = 66/77 (85.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
Relationships
The following mRNA feature(s) are a part of this gene:
|