Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTAACACAATAATATATACTCTTTTGATTTCCTCATTCTCTTAGTTAAACCTCTTTGATTAATAACAATGGGTAGTTTGAAATCCTTGGTTCTTGCTGCTCTTCTTGTTTCCTCCTTCTTTGTTGTGTCCCAAAGCCGAGTGGCTAGGAAAGATTTGGGCCTTGACCTTGGTGGGGTGGGTATTGGGGTTGGAACTGGAATTGGCATTGGACTTGGTGGGAGTGGTTCAGGGTCCGGATCGGGCTCTGGCTCTGGCTCTGGATCGAGTTCGAGTTCCAGTTCTAGTTCTAGCTCTTCTTCTTCTGGATCAGGTTCTAATTCTGGATCTGAAGCAGGTTCATATGCAGGGTCTCGAGCGGGTTCTGGATCGAGTGGTCGTGGAGGTGAAGGTGGAGGGTCGGGTTATGGTGGAGGATATGGATCAGGTTATGGTGGGGGGCATGGAAAATGAGATGTTATTATCTTTTCAATTAACAAGTTG
mRNA sequence
ACTTAACACAATAATATATACTCTTTTGATTTCCTCATTCTCTTAGTTAAACCTCTTTGATTAATAACAATGGGTAGTTTGAAATCCTTGGTTCTTGCTGCTCTTCTTGTTTCCTCCTTCTTTGTTGTGTCCCAAAGCCGAGTGGCTAGGAAAGATTTGGGCCTTGACCTTGGTGGGGTGGGTATTGGGGTTGGAACTGGAATTGGCATTGGACTTGGTGGGAGTGGTTCAGGGTCCGGATCGGGCTCTGGCTCTGGCTCTGGATCGAGTTCGAGTTCCAGTTCTAGTTCTAGCTCTTCTTCTTCTGGATCAGGTTCTAATTCTGGATCTGAAGCAGGTTCATATGCAGGGTCTCGAGCGGGTTCTGGATCGAGTGGTCGTGGAGGTGAAGGTGGAGGGTCGGGTTATGGTGGAGGATATGGATCAGGTTATGGTGGGGGGCATGGAAAATGAGATGTTATTATCTTTTCAATTAACAAGTTG
Coding sequence (CDS)
ATGGGTAGTTTGAAATCCTTGGTTCTTGCTGCTCTTCTTGTTTCCTCCTTCTTTGTTGTGTCCCAAAGCCGAGTGGCTAGGAAAGATTTGGGCCTTGACCTTGGTGGGGTGGGTATTGGGGTTGGAACTGGAATTGGCATTGGACTTGGTGGGAGTGGTTCAGGGTCCGGATCGGGCTCTGGCTCTGGCTCTGGATCGAGTTCGAGTTCCAGTTCTAGTTCTAGCTCTTCTTCTTCTGGATCAGGTTCTAATTCTGGATCTGAAGCAGGTTCATATGCAGGGTCTCGAGCGGGTTCTGGATCGAGTGGTCGTGGAGGTGAAGGTGGAGGGTCGGGTTATGGTGGAGGATATGGATCAGGTTATGGTGGGGGGCATGGAAAATGA
Protein sequence
MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGSGSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSGYGGGHGK
Homology
BLAST of MELO3C010185 vs. NCBI nr
Match:
XP_016899784.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo] >KAA0035121.1 glycine-rich cell wall structural protein 2-like [Cucumis melo var. makuwa])
HSP 1 Score: 169.5 bits (428), Expect = 1.9e-38
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
Query: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS 60
MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS
Sbjct: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS 60
Query: 61 GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG 120
GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG
Sbjct: 61 GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG 120
Query: 121 YGGGHGK 128
YGGGHGK
Sbjct: 121 YGGGHGK 127
BLAST of MELO3C010185 vs. NCBI nr
Match:
XP_004146662.1 (glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN65262.1 hypothetical protein Csa_019748 [Cucumis sativus])
HSP 1 Score: 144.1 bits (362), Expect = 8.5e-31
Identity = 119/130 (91.54%), Postives = 122/130 (93.85%), Query Frame = 0
Query: 1 MGSLKSLVLAALLVSSFFVV-SQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSG 60
MGSLKSLVLAALLVSS FVV SQSRVARKDLGLDLGGVGIGVG G+GIGLGGSGSG+GSG
Sbjct: 1 MGSLKSLVLAALLVSSLFVVSSQSRVARKDLGLDLGGVGIGVGAGVGIGLGGSGSGAGSG 60
Query: 61 SGSGSG--SSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGY 120
SGSGSG SSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSGS GRGGE GSGYGGGY
Sbjct: 61 SGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGRGGE--GSGYGGGY 120
Query: 121 GSGYGGGHGK 128
GSGYGGGHGK
Sbjct: 121 GSGYGGGHGK 128
BLAST of MELO3C010185 vs. NCBI nr
Match:
XP_022921886.1 (glycine-rich cell wall structural protein 2-like [Cucurbita moschata])
HSP 1 Score: 143.3 bits (360), Expect = 1.5e-30
Identity = 113/127 (88.98%), Postives = 119/127 (93.70%), Query Frame = 0
Query: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS 60
MGS KSL+LAA+LVSS VVS+SRVARKDLGLDLGGVG+G+G GIGIGLGGSGSGSGSGS
Sbjct: 1 MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGS 60
Query: 61 GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG 120
GSGS SSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSGS GRG GGGSGYGGGYGSG
Sbjct: 61 GSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGRG--GGGSGYGGGYGSG 120
Query: 121 YGGGHGK 128
YGGGHGK
Sbjct: 121 YGGGHGK 125
BLAST of MELO3C010185 vs. NCBI nr
Match:
XP_022988598.1 (glycine-rich cell wall structural protein 2-like [Cucurbita maxima])
HSP 1 Score: 142.5 bits (358), Expect = 2.5e-30
Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 0
Query: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS 60
MG LKSLVLAA+LVSS VVS+SRVARKDLGLDLGGVG+G+G GIGIGLGGSGSGSGSGS
Sbjct: 1 MGRLKSLVLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGS 60
Query: 61 GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG 120
GSGS SSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSGS G G GGGSGYGGGYGSG
Sbjct: 61 GSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGSG--GGGSGYGGGYGSG 120
Query: 121 YGGGHGK 128
YGGGHGK
Sbjct: 121 YGGGHGK 125
BLAST of MELO3C010185 vs. NCBI nr
Match:
XP_038879831.1 (glycine-rich cell wall structural protein 2 [Benincasa hispida])
HSP 1 Score: 139.8 bits (351), Expect = 1.6e-29
Identity = 115/129 (89.15%), Postives = 118/129 (91.47%), Query Frame = 0
Query: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLG--GSGSGSGS 60
MGSLKSLVLAALLVSS FVVS SRVARKDLGLDLGGVG+G+G GIGIGLG GSGSGSGS
Sbjct: 1 MGSLKSLVLAALLVSSLFVVSHSRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGS 60
Query: 61 GSGSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYG 120
GSGSGSGSSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSGS G G GGGSGYGGGYG
Sbjct: 61 GSGSGSGSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGHG--GGGSGYGGGYG 120
Query: 121 SGYGGGHGK 128
GYGGGH K
Sbjct: 121 GGYGGGHRK 127
BLAST of MELO3C010185 vs. ExPASy TrEMBL
Match:
A0A5A7T0K2 (Glycine-rich cell wall structural protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002000 PE=4 SV=1)
HSP 1 Score: 169.5 bits (428), Expect = 9.2e-39
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
Query: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS 60
MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS
Sbjct: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS 60
Query: 61 GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG 120
GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG
Sbjct: 61 GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG 120
Query: 121 YGGGHGK 128
YGGGHGK
Sbjct: 121 YGGGHGK 127
BLAST of MELO3C010185 vs. ExPASy TrEMBL
Match:
A0A1S4DUX4 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC107990650 PE=4 SV=1)
HSP 1 Score: 169.5 bits (428), Expect = 9.2e-39
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
Query: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS 60
MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS
Sbjct: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS 60
Query: 61 GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG 120
GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG
Sbjct: 61 GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG 120
Query: 121 YGGGHGK 128
YGGGHGK
Sbjct: 121 YGGGHGK 127
BLAST of MELO3C010185 vs. ExPASy TrEMBL
Match:
A0A0A0LWP0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G277980 PE=4 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 4.1e-31
Identity = 119/130 (91.54%), Postives = 122/130 (93.85%), Query Frame = 0
Query: 1 MGSLKSLVLAALLVSSFFVV-SQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSG 60
MGSLKSLVLAALLVSS FVV SQSRVARKDLGLDLGGVGIGVG G+GIGLGGSGSG+GSG
Sbjct: 1 MGSLKSLVLAALLVSSLFVVSSQSRVARKDLGLDLGGVGIGVGAGVGIGLGGSGSGAGSG 60
Query: 61 SGSGSG--SSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGY 120
SGSGSG SSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSGS GRGGE GSGYGGGY
Sbjct: 61 SGSGSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGRGGE--GSGYGGGY 120
Query: 121 GSGYGGGHGK 128
GSGYGGGHGK
Sbjct: 121 GSGYGGGHGK 128
BLAST of MELO3C010185 vs. ExPASy TrEMBL
Match:
A0A6J1E2L6 (glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430017 PE=4 SV=1)
HSP 1 Score: 143.3 bits (360), Expect = 7.1e-31
Identity = 113/127 (88.98%), Postives = 119/127 (93.70%), Query Frame = 0
Query: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS 60
MGS KSL+LAA+LVSS VVS+SRVARKDLGLDLGGVG+G+G GIGIGLGGSGSGSGSGS
Sbjct: 1 MGSWKSLLLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGS 60
Query: 61 GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG 120
GSGS SSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSGS GRG GGGSGYGGGYGSG
Sbjct: 61 GSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGRG--GGGSGYGGGYGSG 120
Query: 121 YGGGHGK 128
YGGGHGK
Sbjct: 121 YGGGHGK 125
BLAST of MELO3C010185 vs. ExPASy TrEMBL
Match:
A0A6J1JMR8 (glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485795 PE=4 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 1.2e-30
Identity = 113/127 (88.98%), Postives = 118/127 (92.91%), Query Frame = 0
Query: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS 60
MG LKSLVLAA+LVSS VVS+SRVARKDLGLDLGGVG+G+G GIGIGLGGSGSGSGSGS
Sbjct: 1 MGRLKSLVLAAMLVSSLLVVSESRVARKDLGLDLGGVGVGIGAGIGIGLGGSGSGSGSGS 60
Query: 61 GSGSGSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGYGSG 120
GSGS SSSSSSSSSSSSSSGSGS+SGSEAGSYAGSRAGSGS G G GGGSGYGGGYGSG
Sbjct: 61 GSGSSSSSSSSSSSSSSSSGSGSDSGSEAGSYAGSRAGSGSGGSG--GGGSGYGGGYGSG 120
Query: 121 YGGGHGK 128
YGGGHGK
Sbjct: 121 YGGGHGK 125
BLAST of MELO3C010185 vs. TAIR 10
Match:
AT4G30460.1 (glycine-rich protein )
HSP 1 Score: 87.4 bits (215), Expect = 8.8e-18
Identity = 86/129 (66.67%), Postives = 101/129 (78.29%), Query Frame = 0
Query: 1 MGSLKSLVLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLGGSGSGSGSGS 60
+ + SL+L L++++ +VS+SRVARKDLGLDLGG+G G+G GIGIG GGSGSG+G+GS
Sbjct: 4 LNNSSSLILITLILATSVLVSESRVARKDLGLDLGGIGAGIGIGIGIGGGGSGSGAGAGS 63
Query: 61 GSGSG---SSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGSSGRGGEGGGSGYGGGY 120
GSG G SSSSSSSSSSSSS G G ++GSEAGSYAGS AGSGS GR G G G G GGG
Sbjct: 64 GSGGGGSSSSSSSSSSSSSSSGGGGGDAGSEAGSYAGSHAGSGSGGRSGSGRGRGSGGGG 123
Query: 121 GSGYGGGHG 127
G G GGG G
Sbjct: 124 GHGGGGGGG 132
BLAST of MELO3C010185 vs. TAIR 10
Match:
AT4G30450.1 (glycine-rich protein )
HSP 1 Score: 82.4 bits (202), Expect = 2.8e-16
Identity = 68/97 (70.10%), Postives = 86/97 (88.66%), Query Frame = 0
Query: 8 VLAALLVSSFFVVSQSRVARKDLGLDLGGVGIGVGTGIGIGLG---GSGSGSGSGSGSGS 67
+L +++SS ++++SR+ARKDLG+DLGG+GIG+G G+GIGLG GSG+G+GSGSGSGS
Sbjct: 9 LLGLVVISSLVMLTESRLARKDLGIDLGGIGIGLGVGLGIGLGGGSGSGAGAGSGSGSGS 68
Query: 68 GSSSSSSSSSSSSSSGSGSNSGSEAGSYAGSRAGSGS 102
SSSSSSSSSSSSSSGSG ++GS AGS+AGSRAGSGS
Sbjct: 69 RSSSSSSSSSSSSSSGSGGSAGSSAGSFAGSRAGSGS 105
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_016899784.1 | 1.9e-38 | 100.00 | PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo] >KAA0... | [more] |
XP_004146662.1 | 8.5e-31 | 91.54 | glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN65262.1 hypoth... | [more] |
XP_022921886.1 | 1.5e-30 | 88.98 | glycine-rich cell wall structural protein 2-like [Cucurbita moschata] | [more] |
XP_022988598.1 | 2.5e-30 | 88.98 | glycine-rich cell wall structural protein 2-like [Cucurbita maxima] | [more] |
XP_038879831.1 | 1.6e-29 | 89.15 | glycine-rich cell wall structural protein 2 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T0K2 | 9.2e-39 | 100.00 | Glycine-rich cell wall structural protein 2-like OS=Cucumis melo var. makuwa OX=... | [more] |
A0A1S4DUX4 | 9.2e-39 | 100.00 | glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
A0A0A0LWP0 | 4.1e-31 | 91.54 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G277980 PE=4 SV=1 | [more] |
A0A6J1E2L6 | 7.1e-31 | 88.98 | glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 G... | [more] |
A0A6J1JMR8 | 1.2e-30 | 88.98 | glycine-rich cell wall structural protein 2-like OS=Cucurbita maxima OX=3661 GN=... | [more] |