Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCCAAAAATTACACAAAACAAAAAACAAAGCATTTCATTACTCTCAAATTCTAGTTCCCGTTAAAACCTTCTTCAATTTTGGTTCAATTACCAATCACACAAATAATGGCTTCCATTAGGGGTGTTGCCGTTGTCACTTTCCTACTTGGCGTGTCCGTTATTGTATCAGAAAGCCGTGTGGCTAGAAAAGACTTGGGCCTCGACCTTGGCGGAATGGGCCTTGGTGTTGGAACAGGAGTGGGCTTGGGCTTAGATGGAAGTGGGTCGGGCTTTGGGTCTGGGCCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTCCGACGCTGGGTCTGAAGCCGGCTCATACGCTGGCTCTTATGCCGGGTCTCGGGCCGGATCTGGTTCGGGCAGAAACAGAAACGGGGGATCCGGTTCCGGTTCAGGGACGGGAAACGGTGGAGAAGGATACGGAGAGGGGCATGGATACGGCGAGGGGCATGGTTATGGCAACGGTGGCGAAAACTGAGATCGAACTTGTATATGAAATTAATTAAGGATTATCGTCATCTTTTCCTTTTGCAAATAGATGAATAAGCTATAGATGATGAATCCTTAATTGTACTCCTGTTTTGTTCTTTTAGTCTAGTTTATATATATATATACACACAGATATGAAGTTCGAATAAAAATGTTCTTCGTATTGAGTGTTAATTAAATTATGAATAATTATAATAGATAGTAATTTTAGTAATAATAATCAAATGTAGAGTAACATTTTTAAAAGATTACAGTTATAGTTGTTGTTACAAAGATAATAAAAAGAGATTATTGTGT
mRNA sequence
GCTCCAAAAATTACACAAAACAAAAAACAAAGCATTTCATTACTCTCAAATTCTAGTTCCCGTTAAAACCTTCTTCAATTTTGGTTCAATTACCAATCACACAAATAATGGCTTCCATTAGGGGTGTTGCCGTTGTCACTTTCCTACTTGGCGTGTCCGTTATTGTATCAGAAAGCCGTGTGGCTAGAAAAGACTTGGGCCTCGACCTTGGCGGAATGGGCCTTGGTGTTGGAACAGGAGTGGGCTTGGGCTTAGATGGAAGTGGGTCGGGCTTTGGGTCTGGGCCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTCCGACGCTGGGTCTGAAGCCGGCTCATACGCTGGCTCTTATGCCGGGTCTCGGGCCGGATCTGGTTCGGGCAGAAACAGAAACGGGGGATCCGGTTCCGGTTCAGGGACGGGAAACGGTGGAGAAGGATACGGAGAGGGGCATGGATACGGCGAGGGGCATGGTTATGGCAACGGTGGCGAAAACTGAGATCGAACTTGTATATGAAATTAATTAAGGATTATCGTCATCTTTTCCTTTTGCAAATAGATGAATAAGCTATAGATGATGAATCCTTAATTGTACTCCTGTTTTGTTCTTTTAGTCTAGTTTATATATATATATACACACAGATATGAAGTTCGAATAAAAATGTTCTTCGTATTGAGTGTTAATTAAATTATGAATAATTATAATAGATAGTAATTTTAGTAATAATAATCAAATGTAGAGTAACATTTTTAAAAGATTACAGTTATAGTTGTTGTTACAAAGATAATAAAAAGAGATTATTGTGT
Coding sequence (CDS)
ATGGCTTCCATTAGGGGTGTTGCCGTTGTCACTTTCCTACTTGGCGTGTCCGTTATTGTATCAGAAAGCCGTGTGGCTAGAAAAGACTTGGGCCTCGACCTTGGCGGAATGGGCCTTGGTGTTGGAACAGGAGTGGGCTTGGGCTTAGATGGAAGTGGGTCGGGCTTTGGGTCTGGGCCTGGGTCCAGTTCTGCTTCCTCATCACACTCCTCAAGCTCCAGCTCTGGCTCCGACGCTGGGTCTGAAGCCGGCTCATACGCTGGCTCTTATGCCGGGTCTCGGGCCGGATCTGGTTCGGGCAGAAACAGAAACGGGGGATCCGGTTCCGGTTCAGGGACGGGAAACGGTGGAGAAGGATACGGAGAGGGGCATGGATACGGCGAGGGGCATGGTTATGGCAACGGTGGCGAAAACTGA
Protein sequence
MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGTGNGGEGYGEGHGYGEGHGYGNGGEN
Homology
BLAST of MELO3C010182 vs. NCBI nr
Match:
XP_008443812.1 (PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo])
HSP 1 Score: 213.8 bits (543), Expect = 9.5e-52
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
Query: 1 MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGP 60
MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGP
Sbjct: 1 MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGP 60
Query: 61 GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGTGNGGEGY 120
GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGTGNGGEGY
Sbjct: 61 GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGTGNGGEGY 120
Query: 121 GEGHGYGEGHGYGNGGEN 139
GEGHGYGEGHGYGNGGEN
Sbjct: 121 GEGHGYGEGHGYGNGGEN 138
BLAST of MELO3C010182 vs. NCBI nr
Match:
XP_038879815.1 (putative per-hexamer repeat protein 5 [Benincasa hispida])
HSP 1 Score: 172.6 bits (436), Expect = 2.4e-39
Identity = 124/151 (82.12%), Postives = 129/151 (85.43%), Query Frame = 0
Query: 1 MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGS 60
MASIR V ++ FLLGVSVIVSE RVAR +LGLDLGG+GLGVGTGVGLGL GSGS
Sbjct: 1 MASIRAVTILAFLLGVSVIVSEGRVARMNLGLDLGGVGLGVGTGVGLGLGGSGSGSGSGS 60
Query: 61 GFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGTG 120
G GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSG+G
Sbjct: 61 GSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGSG 120
Query: 121 NG-------GEGYGEGHGYGEGHGYGNGGEN 139
G GEGYGEGHGYGEGHGYGNGGEN
Sbjct: 121 YGAGSGRGSGEGYGEGHGYGEGHGYGNGGEN 151
BLAST of MELO3C010182 vs. NCBI nr
Match:
XP_023515818.1 (putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 146.0 bits (367), Expect = 2.4e-31
Identity = 114/164 (69.51%), Postives = 122/164 (74.39%), Query Frame = 0
Query: 1 MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGP 60
MASIR V+++ LL +SVIVSESR+AR DLGLDLGG+G+G+GTGVGLGL GSGS GSG
Sbjct: 1 MASIRAVSILALLLALSVIVSESRIARMDLGLDLGGVGVGIGTGVGLGLGGSGS--GSGS 60
Query: 61 GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSG--------------------SG 120
GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSG SG
Sbjct: 61 GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGSGAGSEAGSYAGSRAGSASG 120
Query: 121 RNRNGGSGSGSGTG---------NGGEGYGEGHGYGEGHGYGNG 136
RNRNGGSGSGSG G GGEGYGEGHGYGEG GYG G
Sbjct: 121 RNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGG 162
BLAST of MELO3C010182 vs. NCBI nr
Match:
XP_022921884.1 (glycine-rich cell wall structural protein 2-like [Cucurbita moschata] >KAG6589744.1 hypothetical protein SDJN03_15167, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 145.6 bits (366), Expect = 3.2e-31
Identity = 112/151 (74.17%), Postives = 121/151 (80.13%), Query Frame = 0
Query: 1 MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGS 60
MASIR V+++ LL +SVIVSESRVAR DLGLDLGG+G+G+GTGVGLGL GSGS
Sbjct: 1 MASIRAVSILALLLALSVIVSESRVARMDLGLDLGGVGVGIGTGVGLGLGGSGSGSGSGS 60
Query: 61 GFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGTG 120
G GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGSY AGSGSGRNRNGGSGSGSG+G
Sbjct: 61 GSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSY----AGSGSGRNRNGGSGSGSGSG 120
Query: 121 NG-------GEGYGEGHGYGEGHGYGNGGEN 139
+G G G G G GYGEGHGYGN GEN
Sbjct: 121 SGYGAGSGRGSGSGGGEGYGEGHGYGNDGEN 147
BLAST of MELO3C010182 vs. NCBI nr
Match:
KAG6589745.1 (hypothetical protein SDJN03_15168, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 139.0 bits (349), Expect = 3.0e-29
Identity = 111/164 (67.68%), Postives = 120/164 (73.17%), Query Frame = 0
Query: 1 MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGP 60
MASI + VV FLL SVIVS++RVARKDLGLDLGG+G+G+GTG+GLGL GSGSG GSG
Sbjct: 1 MASINSLIVVCFLLSFSVIVSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSGS 60
Query: 61 G----SSSASSSHSSSSSSGSDAGSEAGSY----------------AGSYAGSRAGSGSG 120
G SSS+SSS+SSSS SGS AGSEAGSY AGSYAGSRAGSGSG
Sbjct: 61 GSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRAGSGSG 120
Query: 121 RNRNGGSGSGSGTG---------NGGEGYGEGHGYGEGHGYGNG 136
RNRNGGSGSGSG G GGEGYGEGHGYGEG GYG G
Sbjct: 121 RNRNGGSGSGSGYGGGSGRGSGNGGGEGYGEGHGYGEGRGYGGG 164
BLAST of MELO3C010182 vs. ExPASy TrEMBL
Match:
A0A1S3B8Y8 (putative glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=LOC103487315 PE=4 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 4.6e-52
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
Query: 1 MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGP 60
MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGP
Sbjct: 1 MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGP 60
Query: 61 GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGTGNGGEGY 120
GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGTGNGGEGY
Sbjct: 61 GSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGTGNGGEGY 120
Query: 121 GEGHGYGEGHGYGNGGEN 139
GEGHGYGEGHGYGNGGEN
Sbjct: 121 GEGHGYGEGHGYGNGGEN 138
BLAST of MELO3C010182 vs. ExPASy TrEMBL
Match:
A0A6J1E1T0 (glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430015 PE=4 SV=1)
HSP 1 Score: 145.6 bits (366), Expect = 1.5e-31
Identity = 112/151 (74.17%), Postives = 121/151 (80.13%), Query Frame = 0
Query: 1 MASIRGVAVVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSGS 60
MASIR V+++ LL +SVIVSESRVAR DLGLDLGG+G+G+GTGVGLGL GSGS
Sbjct: 1 MASIRAVSILALLLALSVIVSESRVARMDLGLDLGGVGVGIGTGVGLGLGGSGSGSGSGS 60
Query: 61 GFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGTG 120
G GSG GSSSASSSHSSSSSSGSDAGSEAGSYAGSY AGSGSGRNRNGGSGSGSG+G
Sbjct: 61 GSGSGSGSSSASSSHSSSSSSGSDAGSEAGSYAGSY----AGSGSGRNRNGGSGSGSGSG 120
Query: 121 NG-------GEGYGEGHGYGEGHGYGNGGEN 139
+G G G G G GYGEGHGYGN GEN
Sbjct: 121 SGYGAGSGRGSGSGGGEGYGEGHGYGNDGEN 147
BLAST of MELO3C010182 vs. ExPASy TrEMBL
Match:
A0A1S3B9N0 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487316 PE=4 SV=1)
HSP 1 Score: 138.3 bits (347), Expect = 2.5e-29
Identity = 107/151 (70.86%), Postives = 118/151 (78.15%), Query Frame = 0
Query: 1 MASIRGVA-VVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSG 60
MASI+ +A VV LL SV +SE RVARKDLG+DLGG+G+G+G G+GLG+ GSG
Sbjct: 1 MASIKSLALVVCLLLSFSVFLSEGRVARKDLGIDLGGLGVGLGAGIGLGIGGSGSGSGSG 60
Query: 61 SGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGT 120
SG GSG GSSS+SSS+SSSSSSGS AGSEAGSYAGSYAGSRAGSGSG NRNGGSG GSG
Sbjct: 61 SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
Query: 121 GNG---------GEGYGEGHGYGEGHGYGNG 136
G G GEGYGEGHGYGEGHGYG G
Sbjct: 121 GGGSGRGGSNGNGEGYGEGHGYGEGHGYGGG 151
BLAST of MELO3C010182 vs. ExPASy TrEMBL
Match:
A0A0A0LTK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G278500 PE=4 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 9.4e-29
Identity = 107/152 (70.39%), Postives = 118/152 (77.63%), Query Frame = 0
Query: 1 MASIRGVA-VVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGL------DGSG 60
MASI+ +A VV LL S I+SE RVARKDLG+DLGG+G+G+GTG+GLG+ GSG
Sbjct: 1 MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
Query: 61 SGFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGT 120
SG GSG GSSS+SSS+SSSSSSGS AGSEAGSYAGSYAGSRAGSGSG NRNGGSG GSG
Sbjct: 61 SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
Query: 121 GNG----------GEGYGEGHGYGEGHGYGNG 136
G G GEGYGEGHGYGEG GYG G
Sbjct: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGG 152
BLAST of MELO3C010182 vs. ExPASy TrEMBL
Match:
A0A6J1C497 (putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3673 GN=LOC111007250 PE=4 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 9.4e-29
Identity = 105/144 (72.92%), Postives = 119/144 (82.64%), Query Frame = 0
Query: 1 MASIRGVAVVTFLLGVS-VIVSESRVARKDLGLDLGGMGLGVGTGVGLG-----LDGSGS 60
MA+IR AVV F+LG+S IVSE+RVARKDLG+DLGG+G+G+G G+GLG G+G+
Sbjct: 1 MAAIRCFAVVAFILGLSAAIVSEARVARKDLGIDLGGVGVGLGAGIGLGGGSGSGSGAGA 60
Query: 61 GFGSGPGSSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSGRNRNGGSGSGSGTG 120
G GSG GSSS+SSS+SSSSSSGS AGSEAGSYAGSYAGSRAGSGSG NR GSGSG G G
Sbjct: 61 GSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRGSGSGSGYGGG 120
Query: 121 NG---GEGYGEGHGYGEGHGYGNG 136
+G GEGYGEGHGYGEGHGYG G
Sbjct: 121 SGRGSGEGYGEGHGYGEGHGYGGG 144
BLAST of MELO3C010182 vs. TAIR 10
Match:
AT4G30460.1 (glycine-rich protein )
HSP 1 Score: 97.1 bits (240), Expect = 1.2e-20
Identity = 89/145 (61.38%), Postives = 101/145 (69.66%), Query Frame = 0
Query: 9 VVTFLLGVSVIVSESRVARKDLGLDLGGMGLGVGTGVGLGLDGSGSGFGSGPG------S 68
++T +L SV+VSESRVARKDLGLDLGG+G G+G G+G+G GSGSG G+G G S
Sbjct: 12 LITLILATSVLVSESRVARKDLGLDLGGIGAGIGIGIGIGGGGSGSGAGAGSGSGGGGSS 71
Query: 69 SSASSSHSSSSSS---GSDAGSEAGSYAGSYAGS----RAGSGSGRNRNGGSGSGSGTG- 128
SS+SSS SSSSSS G DAGSEAGSYAGS+AGS R+GSG GR GG G G G G
Sbjct: 72 SSSSSSSSSSSSSGGGGGDAGSEAGSYAGSHAGSGSGGRSGSGRGRGSGGGGGHGGGGGG 131
Query: 129 ----NGGEGYGEGHGYGEGHGYGNG 136
GG G G G GYGEG GYG G
Sbjct: 132 GGGRGGGGGSGNGEGYGEGGGYGGG 156
BLAST of MELO3C010182 vs. TAIR 10
Match:
AT4G30450.1 (glycine-rich protein )
HSP 1 Score: 79.0 bits (193), Expect = 3.4e-15
Identity = 62/99 (62.63%), Postives = 77/99 (77.78%), Query Frame = 0
Query: 12 FLLGVSVI-----VSESRVARKDLGLDLGGMGLGVGTGVGLGL-----DGSGSGFGSGPG 71
FLLG+ VI ++ESR+ARKDLG+DLGG+G+G+G G+G+GL G+G+G GSG G
Sbjct: 8 FLLGLVVISSLVMLTESRLARKDLGIDLGGIGIGLGVGLGIGLGGGSGSGAGAGSGSGSG 67
Query: 72 SSSASSSHSSSSSSGSDAGSEAGSYAGSYAGSRAGSGSG 101
S S+SSS SSSSSS S +G AGS AGS+AGSRAGSGSG
Sbjct: 68 SRSSSSSSSSSSSSSSGSGGSAGSSAGSFAGSRAGSGSG 106
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008443812.1 | 9.5e-52 | 100.00 | PREDICTED: putative glycine-rich cell wall structural protein 1 [Cucumis melo] | [more] |
XP_038879815.1 | 2.4e-39 | 82.12 | putative per-hexamer repeat protein 5 [Benincasa hispida] | [more] |
XP_023515818.1 | 2.4e-31 | 69.51 | putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita pepo ... | [more] |
XP_022921884.1 | 3.2e-31 | 74.17 | glycine-rich cell wall structural protein 2-like [Cucurbita moschata] >KAG658974... | [more] |
KAG6589745.1 | 3.0e-29 | 67.68 | hypothetical protein SDJN03_15168, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3B8Y8 | 4.6e-52 | 100.00 | putative glycine-rich cell wall structural protein 1 OS=Cucumis melo OX=3656 GN=... | [more] |
A0A6J1E1T0 | 1.5e-31 | 74.17 | glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 G... | [more] |
A0A1S3B9N0 | 2.5e-29 | 70.86 | glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
A0A0A0LTK9 | 9.4e-29 | 70.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G278500 PE=4 SV=1 | [more] |
A0A6J1C497 | 9.4e-29 | 72.92 | putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3... | [more] |